; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC11G217470 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC11G217470
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionRING/U-box superfamily protein
Genome locationCiama_Chr11:30928941..30939576
RNA-Seq ExpressionCaUC11G217470
SyntenyCaUC11G217470
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004140426.1 uncharacterized protein LOC101206682 isoform X1 [Cucumis sativus]1.6e-9196.57Show/hide
Query:  FVSCGHSFGGLMLRRVTETSRCTICNSEIDAASLIPNLALRAAASAVKHEDDRRLFHNAALRKRRKEMGDQMDPMRRLNRENGDLAIDDGIHRGVQYPFA
        FVSCGHSFGGLMLRRV ETSRCTICNSEIDA SLIPNLALRAAASAVKHEDDRRLFHNAALRKRRKEMGD MDPMRRLNRENGDLAIDDGIHRGVQYPFA
Subjt:  FVSCGHSFGGLMLRRVTETSRCTICNSEIDAASLIPNLALRAAASAVKHEDDRRLFHNAALRKRRKEMGDQMDPMRRLNRENGDLAIDDGIHRGVQYPFA

Query:  ENEKVLIKGNRRTPEKFVGKEAIITSQCLNGWYLLKIIGTGENVRLQYRSLRKILNTTPANDDSCPSQPLQHSCS
        ENEKVLIKGNRRTPEKFVGKEA+ITSQCLNGWYLLKIIGTGENVRLQYRSLRKILNTTPAND+SCP QPLQHSCS
Subjt:  ENEKVLIKGNRRTPEKFVGKEAIITSQCLNGWYLLKIIGTGENVRLQYRSLRKILNTTPANDDSCPSQPLQHSCS

XP_008456843.1 PREDICTED: uncharacterized protein LOC103496673 isoform X2 [Cucumis melo]5.1e-9094.89Show/hide
Query:  MFVSCGHSFGGLMLRRVTETSRCTICNSEIDAASLIPNLALRAAASAVKHEDDRRLFHNAALRKRRKEMGDQMDPMRRLNRENGDLAIDDGIHRGVQYPF
        MFVSCGHSFGGLMLRRV ETSRCTICNSEIDA SLIPNLALRAAASAVKHEDDRRLFHNAA+RKRRKEMGD MDPMRRLNRENGDLAIDDGIHRGVQYPF
Subjt:  MFVSCGHSFGGLMLRRVTETSRCTICNSEIDAASLIPNLALRAAASAVKHEDDRRLFHNAALRKRRKEMGDQMDPMRRLNRENGDLAIDDGIHRGVQYPF

Query:  AENEKVLIKGNRRTPEKFVGKEAIITSQCLNGWYLLKIIGTGENVRLQYRSLRKILNTTPANDDSCPSQPLQHSCS
        AENEKVLIKGNRRTPEKFVGKEA+ITSQCLNGWYLLKIIGTGENVRLQYRSLRKILNTTPAND+S P QPLQH+CS
Subjt:  AENEKVLIKGNRRTPEKFVGKEAIITSQCLNGWYLLKIIGTGENVRLQYRSLRKILNTTPANDDSCPSQPLQHSCS

XP_031741483.1 uncharacterized protein LOC101206682 isoform X3 [Cucumis sativus]1.6e-9196.57Show/hide
Query:  FVSCGHSFGGLMLRRVTETSRCTICNSEIDAASLIPNLALRAAASAVKHEDDRRLFHNAALRKRRKEMGDQMDPMRRLNRENGDLAIDDGIHRGVQYPFA
        FVSCGHSFGGLMLRRV ETSRCTICNSEIDA SLIPNLALRAAASAVKHEDDRRLFHNAALRKRRKEMGD MDPMRRLNRENGDLAIDDGIHRGVQYPFA
Subjt:  FVSCGHSFGGLMLRRVTETSRCTICNSEIDAASLIPNLALRAAASAVKHEDDRRLFHNAALRKRRKEMGDQMDPMRRLNRENGDLAIDDGIHRGVQYPFA

Query:  ENEKVLIKGNRRTPEKFVGKEAIITSQCLNGWYLLKIIGTGENVRLQYRSLRKILNTTPANDDSCPSQPLQHSCS
        ENEKVLIKGNRRTPEKFVGKEA+ITSQCLNGWYLLKIIGTGENVRLQYRSLRKILNTTPAND+SCP QPLQHSCS
Subjt:  ENEKVLIKGNRRTPEKFVGKEAIITSQCLNGWYLLKIIGTGENVRLQYRSLRKILNTTPANDDSCPSQPLQHSCS

XP_038891861.1 uncharacterized protein LOC120081226 isoform X1 [Benincasa hispida]2.1e-9195.43Show/hide
Query:  MFVSCGHSFGGLMLRRVTETSRCTICNSEIDAASLIPNLALRAAASAVKHEDDRRLFHNAALRKRRKEMGDQMDPMRRLNRENGDLAIDDGIHRGVQYPF
        MFVSCGHSFGGLMLRRV ETSRCTICNSEIDA SLIPNLALRAAASAVKHEDDRRLFHNAALRKRRKEMGDQMDP+RRLNRENGD+ IDDGIHRGVQYPF
Subjt:  MFVSCGHSFGGLMLRRVTETSRCTICNSEIDAASLIPNLALRAAASAVKHEDDRRLFHNAALRKRRKEMGDQMDPMRRLNRENGDLAIDDGIHRGVQYPF

Query:  AENEKVLIKGNRRTPEKFVGKEAIITSQCLNGWYLLKIIGTGENVRLQYRSLRKILNTTPANDDSCPSQPLQHSC
        AENEKVLIKGNRRTPEKFVGKEA+ITSQCLNGWYLLKIIGTGENVRLQYRSLRKILNTTPAN+DSCPSQPLQH C
Subjt:  AENEKVLIKGNRRTPEKFVGKEAIITSQCLNGWYLLKIIGTGENVRLQYRSLRKILNTTPANDDSCPSQPLQHSC

XP_038891864.1 uncharacterized protein LOC120081226 isoform X2 [Benincasa hispida]2.1e-9195.43Show/hide
Query:  MFVSCGHSFGGLMLRRVTETSRCTICNSEIDAASLIPNLALRAAASAVKHEDDRRLFHNAALRKRRKEMGDQMDPMRRLNRENGDLAIDDGIHRGVQYPF
        MFVSCGHSFGGLMLRRV ETSRCTICNSEIDA SLIPNLALRAAASAVKHEDDRRLFHNAALRKRRKEMGDQMDP+RRLNRENGD+ IDDGIHRGVQYPF
Subjt:  MFVSCGHSFGGLMLRRVTETSRCTICNSEIDAASLIPNLALRAAASAVKHEDDRRLFHNAALRKRRKEMGDQMDPMRRLNRENGDLAIDDGIHRGVQYPF

Query:  AENEKVLIKGNRRTPEKFVGKEAIITSQCLNGWYLLKIIGTGENVRLQYRSLRKILNTTPANDDSCPSQPLQHSC
        AENEKVLIKGNRRTPEKFVGKEA+ITSQCLNGWYLLKIIGTGENVRLQYRSLRKILNTTPAN+DSCPSQPLQH C
Subjt:  AENEKVLIKGNRRTPEKFVGKEAIITSQCLNGWYLLKIIGTGENVRLQYRSLRKILNTTPANDDSCPSQPLQHSC

TrEMBL top hitse value%identityAlignment
A0A1S3C3S2 uncharacterized protein LOC103496673 isoform X12.4e-9094.89Show/hide
Query:  MFVSCGHSFGGLMLRRVTETSRCTICNSEIDAASLIPNLALRAAASAVKHEDDRRLFHNAALRKRRKEMGDQMDPMRRLNRENGDLAIDDGIHRGVQYPF
        MFVSCGHSFGGLMLRRV ETSRCTICNSEIDA SLIPNLALRAAASAVKHEDDRRLFHNAA+RKRRKEMGD MDPMRRLNRENGDLAIDDGIHRGVQYPF
Subjt:  MFVSCGHSFGGLMLRRVTETSRCTICNSEIDAASLIPNLALRAAASAVKHEDDRRLFHNAALRKRRKEMGDQMDPMRRLNRENGDLAIDDGIHRGVQYPF

Query:  AENEKVLIKGNRRTPEKFVGKEAIITSQCLNGWYLLKIIGTGENVRLQYRSLRKILNTTPANDDSCPSQPLQHSCS
        AENEKVLIKGNRRTPEKFVGKEA+ITSQCLNGWYLLKIIGTGENVRLQYRSLRKILNTTPAND+S P QPLQH+CS
Subjt:  AENEKVLIKGNRRTPEKFVGKEAIITSQCLNGWYLLKIIGTGENVRLQYRSLRKILNTTPANDDSCPSQPLQHSCS

A0A1S3C495 uncharacterized protein LOC103496673 isoform X22.4e-9094.89Show/hide
Query:  MFVSCGHSFGGLMLRRVTETSRCTICNSEIDAASLIPNLALRAAASAVKHEDDRRLFHNAALRKRRKEMGDQMDPMRRLNRENGDLAIDDGIHRGVQYPF
        MFVSCGHSFGGLMLRRV ETSRCTICNSEIDA SLIPNLALRAAASAVKHEDDRRLFHNAA+RKRRKEMGD MDPMRRLNRENGDLAIDDGIHRGVQYPF
Subjt:  MFVSCGHSFGGLMLRRVTETSRCTICNSEIDAASLIPNLALRAAASAVKHEDDRRLFHNAALRKRRKEMGDQMDPMRRLNRENGDLAIDDGIHRGVQYPF

Query:  AENEKVLIKGNRRTPEKFVGKEAIITSQCLNGWYLLKIIGTGENVRLQYRSLRKILNTTPANDDSCPSQPLQHSCS
        AENEKVLIKGNRRTPEKFVGKEA+ITSQCLNGWYLLKIIGTGENVRLQYRSLRKILNTTPAND+S P QPLQH+CS
Subjt:  AENEKVLIKGNRRTPEKFVGKEAIITSQCLNGWYLLKIIGTGENVRLQYRSLRKILNTTPANDDSCPSQPLQHSCS

A0A5A7SSH6 RING/U-box superfamily protein isoform 12.4e-9094.89Show/hide
Query:  MFVSCGHSFGGLMLRRVTETSRCTICNSEIDAASLIPNLALRAAASAVKHEDDRRLFHNAALRKRRKEMGDQMDPMRRLNRENGDLAIDDGIHRGVQYPF
        MFVSCGHSFGGLMLRRV ETSRCTICNSEIDA SLIPNLALRAAASAVKHEDDRRLFHNAA+RKRRKEMGD MDPMRRLNRENGDLAIDDGIHRGVQYPF
Subjt:  MFVSCGHSFGGLMLRRVTETSRCTICNSEIDAASLIPNLALRAAASAVKHEDDRRLFHNAALRKRRKEMGDQMDPMRRLNRENGDLAIDDGIHRGVQYPF

Query:  AENEKVLIKGNRRTPEKFVGKEAIITSQCLNGWYLLKIIGTGENVRLQYRSLRKILNTTPANDDSCPSQPLQHSCS
        AENEKVLIKGNRRTPEKFVGKEA+ITSQCLNGWYLLKIIGTGENVRLQYRSLRKILNTTPAND+S P QPLQH+CS
Subjt:  AENEKVLIKGNRRTPEKFVGKEAIITSQCLNGWYLLKIIGTGENVRLQYRSLRKILNTTPANDDSCPSQPLQHSCS

A0A5D3CRE0 RING/U-box superfamily protein isoform 12.4e-9094.89Show/hide
Query:  MFVSCGHSFGGLMLRRVTETSRCTICNSEIDAASLIPNLALRAAASAVKHEDDRRLFHNAALRKRRKEMGDQMDPMRRLNRENGDLAIDDGIHRGVQYPF
        MFVSCGHSFGGLMLRRV ETSRCTICNSEIDA SLIPNLALRAAASAVKHEDDRRLFHNAA+RKRRKEMGD MDPMRRLNRENGDLAIDDGIHRGVQYPF
Subjt:  MFVSCGHSFGGLMLRRVTETSRCTICNSEIDAASLIPNLALRAAASAVKHEDDRRLFHNAALRKRRKEMGDQMDPMRRLNRENGDLAIDDGIHRGVQYPF

Query:  AENEKVLIKGNRRTPEKFVGKEAIITSQCLNGWYLLKIIGTGENVRLQYRSLRKILNTTPANDDSCPSQPLQHSCS
        AENEKVLIKGNRRTPEKFVGKEA+ITSQCLNGWYLLKIIGTGENVRLQYRSLRKILNTTPAND+S P QPLQH+CS
Subjt:  AENEKVLIKGNRRTPEKFVGKEAIITSQCLNGWYLLKIIGTGENVRLQYRSLRKILNTTPANDDSCPSQPLQHSCS

A0A6J1JTN9 uncharacterized protein LOC1114874104.2e-9094.32Show/hide
Query:  MFVSCGHSFGGLMLRRVTETSRCTICNSEIDAASLIPNLALRAAASAVKHEDDRRLFHNAALRKRRKEMGDQMDPMRRLNRENGDLAIDDGIHRGVQYPF
        MFVSCGHSFGGLMLRRV ETSRCT+CNSEIDA SLIPN+ALRAAASAVK EDDRRLFHNAALRKRRKEMGDQMDPMRRLNRENGD+AIDDGIHRGVQYPF
Subjt:  MFVSCGHSFGGLMLRRVTETSRCTICNSEIDAASLIPNLALRAAASAVKHEDDRRLFHNAALRKRRKEMGDQMDPMRRLNRENGDLAIDDGIHRGVQYPF

Query:  AENEKVLIKGNRRTPEKFVGKEAIITSQCLNGWYLLKIIGTGENVRLQYRSLRKILNTTPANDDSCPSQPLQHSCS
        A NEKVLIKGNRRTPEKFVGKEA+ITSQCLNGWYLLKIIGTGENVRLQYRSLRKILNTTPAN+DSCPSQPLQHS S
Subjt:  AENEKVLIKGNRRTPEKFVGKEAIITSQCLNGWYLLKIIGTGENVRLQYRSLRKILNTTPANDDSCPSQPLQHSCS

SwissProt top hitse value%identityAlignment
Q58FY4 U-box domain-containing protein 632.5e-2339.07Show/hide
Query:  CGHSFGGLMLRRVTETSRCTICNSEIDAASLIPNLALRAAASAVKHEDDRRLFHNAALRKRRKEMGDQMDPMRRLNRENGDLAIDDGIHRGVQYPFAENE
        CGHSFG   L+ V +   C  C+      S  PNL+LR    A + E+D    H     KRRKE  DQ       N     +       RG+Q+PF+  +
Subjt:  CGHSFGGLMLRRVTETSRCTICNSEIDAASLIPNLALRAAASAVKHEDDRRLFHNAALRKRRKEMGDQMDPMRRLNRENGDLAIDDGIHRGVQYPFAENE

Query:  KVLIKGNRRTPEKFVGKEAIITSQCLNGWYLLKIIGTGENVRLQYRSLRKI
         ++I+GN+RTP +FVG+ A+I +QCLNGWY++K +   E+++LQ+ SL KI
Subjt:  KVLIKGNRRTPEKFVGKEAIITSQCLNGWYLLKIIGTGENVRLQYRSLRKI

Q6DBN5 U-box domain-containing protein 623.5e-2538.31Show/hide
Query:  MFVSCGHSFGGLMLRRVTETSRCTICNSEIDAASLIPNLALRAAASAVKHEDDRRLFHNAALRKRRKEMGDQMDPMRRLNRENGDLAIDDGIHRGVQYPF
        M + CGH+FG   + +V +   C  C+  +   S+ PNL LR A  A   E++ +  H +   KR++E  DQ      +   +G        ++   +PF
Subjt:  MFVSCGHSFGGLMLRRVTETSRCTICNSEIDAASLIPNLALRAAASAVKHEDDRRLFHNAALRKRRKEMGDQMDPMRRLNRENGDLAIDDGIHRGVQYPF

Query:  AENEKVLIKGNRRTPEKFVGKEAIITSQCLNGWYLLKIIGTGENVRLQYRSLRK
        A  ++V+IKGN+RTP +FVG+EA++T+QCLNGWY++K +   E+V+LQYRSL K
Subjt:  AENEKVLIKGNRRTPEKFVGKEAIITSQCLNGWYLLKIIGTGENVRLQYRSLRK

Arabidopsis top hitse value%identityAlignment
AT2G40640.1 RING/U-box superfamily protein1.8e-2439.07Show/hide
Query:  CGHSFGGLMLRRVTETSRCTICNSEIDAASLIPNLALRAAASAVKHEDDRRLFHNAALRKRRKEMGDQMDPMRRLNRENGDLAIDDGIHRGVQYPFAENE
        CGHSFG   L+ V +   C  C+      S  PNL+LR    A + E+D    H     KRRKE  DQ       N     +       RG+Q+PF+  +
Subjt:  CGHSFGGLMLRRVTETSRCTICNSEIDAASLIPNLALRAAASAVKHEDDRRLFHNAALRKRRKEMGDQMDPMRRLNRENGDLAIDDGIHRGVQYPFAENE

Query:  KVLIKGNRRTPEKFVGKEAIITSQCLNGWYLLKIIGTGENVRLQYRSLRKI
         ++I+GN+RTP +FVG+ A+I +QCLNGWY++K +   E+++LQ+ SL KI
Subjt:  KVLIKGNRRTPEKFVGKEAIITSQCLNGWYLLKIIGTGENVRLQYRSLRKI

AT2G40640.2 RING/U-box superfamily protein1.1e-1838.64Show/hide
Query:  CGHSFGGLMLRRVTETSRCTICNSEIDAASLIPNLALRAAASAVKHEDDRRLFHNAALRKRRKEMGDQMDPMRRLNRENGDLAIDDGIHRGVQYPFAENE
        CGHSFG   L+ V +   C  C+      S  PNL+LR    A + E+D    H     KRRKE  DQ       N     +       RG+Q+PF+  +
Subjt:  CGHSFGGLMLRRVTETSRCTICNSEIDAASLIPNLALRAAASAVKHEDDRRLFHNAALRKRRKEMGDQMDPMRRLNRENGDLAIDDGIHRGVQYPFAENE

Query:  KVLIKGNRRTPEKFVGKEAIITSQCLNGWYLL
         ++I+GN+RTP +FVG+ A+I +QCLNGW  L
Subjt:  KVLIKGNRRTPEKFVGKEAIITSQCLNGWYLL

AT3G19895.1 RING/U-box superfamily protein2.7e-6575.8Show/hide
Query:  MFVSCGHSFGGLMLRRVTETSRCTICNSEIDAASLIPNLALRAAASAVKHEDDRRLFHNAALRKRRKEMGDQMDPMRRLNRENGDLAIDDGIHRGVQYPF
        M VSCGHSFGGLMLRRV E SRCT+CN+EI++ SL+PN ALRAAASA+K +DD+RLFHNAA+R+RRKEM DQMD       ENGD A DDG+HR V YPF
Subjt:  MFVSCGHSFGGLMLRRVTETSRCTICNSEIDAASLIPNLALRAAASAVKHEDDRRLFHNAALRKRRKEMGDQMDPMRRLNRENGDLAIDDGIHRGVQYPF

Query:  AENEKVLIKGNRRTPEKFVGKEAIITSQCLNGWYLLKIIGTGENVRLQYRSLRKILN
        A NEKVLIKGNRRTPEKFVGKEAI+TSQCLNGWYLLKI+ +G+NVRLQYRSL+K++N
Subjt:  AENEKVLIKGNRRTPEKFVGKEAIITSQCLNGWYLLKIIGTGENVRLQYRSLRKILN

AT5G05230.1 RING/U-box superfamily protein2.5e-2638.31Show/hide
Query:  MFVSCGHSFGGLMLRRVTETSRCTICNSEIDAASLIPNLALRAAASAVKHEDDRRLFHNAALRKRRKEMGDQMDPMRRLNRENGDLAIDDGIHRGVQYPF
        M + CGH+FG   + +V +   C  C+  +   S+ PNL LR A  A   E++ +  H +   KR++E  DQ      +   +G        ++   +PF
Subjt:  MFVSCGHSFGGLMLRRVTETSRCTICNSEIDAASLIPNLALRAAASAVKHEDDRRLFHNAALRKRRKEMGDQMDPMRRLNRENGDLAIDDGIHRGVQYPF

Query:  AENEKVLIKGNRRTPEKFVGKEAIITSQCLNGWYLLKIIGTGENVRLQYRSLRK
        A  ++V+IKGN+RTP +FVG+EA++T+QCLNGWY++K +   E+V+LQYRSL K
Subjt:  AENEKVLIKGNRRTPEKFVGKEAIITSQCLNGWYLLKIIGTGENVRLQYRSLRK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGTTTCATGTGGACATTCATTTGGTGGTCTCATGCTGAGGAGGGTCACTGAGACGTCAAGGTGCACCATATGCAACTCAGAAATCGATGCTGCATCTTTGATTCC
TAATCTAGCACTTAGAGCTGCAGCTTCAGCTGTGAAGCATGAAGATGATAGGAGGCTATTCCACAATGCTGCTTTGAGGAAGCGTCGGAAAGAAATGGGCGATCAGATGG
ATCCAATGAGAAGATTAAACAGGGAAAACGGTGATCTTGCCATTGATGATGGCATCCATCGAGGAGTGCAGTATCCTTTTGCAGAAAATGAAAAGGTTCTAATTAAGGGA
AACAGGAGAACGCCAGAAAAATTTGTTGGGAAAGAAGCAATCATCACTTCCCAGTGTCTCAATGGCTGGTATTTGCTAAAAATCATTGGGACTGGAGAGAATGTTCGGTT
GCAATATCGCTCTCTTAGGAAGATCCTGAACACGACACCAGCTAATGACGATAGCTGTCCTTCGCAGCCTCTTCAGCACAGTTGCTCATAA
mRNA sequenceShow/hide mRNA sequence
ATGTTTGTTTCATGTGGACATTCATTTGGTGGTCTCATGCTGAGGAGGGTCACTGAGACGTCAAGGTGCACCATATGCAACTCAGAAATCGATGCTGCATCTTTGATTCC
TAATCTAGCACTTAGAGCTGCAGCTTCAGCTGTGAAGCATGAAGATGATAGGAGGCTATTCCACAATGCTGCTTTGAGGAAGCGTCGGAAAGAAATGGGCGATCAGATGG
ATCCAATGAGAAGATTAAACAGGGAAAACGGTGATCTTGCCATTGATGATGGCATCCATCGAGGAGTGCAGTATCCTTTTGCAGAAAATGAAAAGGTTCTAATTAAGGGA
AACAGGAGAACGCCAGAAAAATTTGTTGGGAAAGAAGCAATCATCACTTCCCAGTGTCTCAATGGCTGGTATTTGCTAAAAATCATTGGGACTGGAGAGAATGTTCGGTT
GCAATATCGCTCTCTTAGGAAGATCCTGAACACGACACCAGCTAATGACGATAGCTGTCCTTCGCAGCCTCTTCAGCACAGTTGCTCATAAAATCTATATCTCTGGTTGT
TGATGATTATTAATCAATAGCAACAAGTAAAATTCTAATTATGGTTTGGGTCAGCAAAAGGTTGTGGATTTAGTTTTGTAAAAAAATCCTTGAAAATGTATTTAGTTTTT
CTTTTCTTTTCTTTTCTTTTTTTCTTTTTAGTCCTTGGAGTACCATTAAATTATAGGCCCAGGAAAACATTTATATGTATCATTACGCAGGAGATGAGTGAGATAAATTA
TATGCAAATTGAGACTGGAGGCATGGATTCTGGCCTATTATTGGGAGCCATTAAGCTTGAAAGGAAAAACTTTGGTGAAATTCTATTGTTATATGTTTCGGTGCTGTATT
AATCTTTGTAAAAAAATTCCAATACATTCAATAATGTGACTGATTTAAAATTCTACTATT
Protein sequenceShow/hide protein sequence
MFVSCGHSFGGLMLRRVTETSRCTICNSEIDAASLIPNLALRAAASAVKHEDDRRLFHNAALRKRRKEMGDQMDPMRRLNRENGDLAIDDGIHRGVQYPFAENEKVLIKG
NRRTPEKFVGKEAIITSQCLNGWYLLKIIGTGENVRLQYRSLRKILNTTPANDDSCPSQPLQHSCS