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Carg00003 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg00003
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionCOX assembly mitochondrial protein
Genome locationCarg_Chr04:4846033..4847095
RNA-Seq ExpressionCarg00003
SyntenyCarg00003
Gene Ontology termsGO:0005739 - mitochondrion (cellular component)
InterPro domainsIPR013892 - Cytochrome c oxidase biogenesis protein Cmc1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7031350.1 hypothetical protein SDJN02_05390, partial [Cucurbita argyrosperma subsp. argyrosperma]7.3e-29100Show/hide
Query:  VAVDLIIEEFQKCHLDHPIGKFLGECTDLKIKLDRCFRQEKALKRKANFEQSKKMKERLDALRKENAL
        VAVDLIIEEFQKCHLDHPIGKFLGECTDLKIKLDRCFRQEKALKRKANFEQSKKMKERLDALRKENAL
Subjt:  VAVDLIIEEFQKCHLDHPIGKFLGECTDLKIKLDRCFRQEKALKRKANFEQSKKMKERLDALRKENAL
KGN56273.1 hypothetical protein Csa_009541 [Cucumis sativus]4.9e-2593.65Show/hide
Query:  IIEEFQKCHLDHPIGKFLGECTDLKIKLDRCFRQEKALKRKANFEQSKKMKERLDALRKENAL
        IIE+FQKCH+DHP+GKF GECTDLKIKLDRCFRQEKALKRKANFEQSKKMKERLDALRKENAL
Subjt:  IIEEFQKCHLDHPIGKFLGECTDLKIKLDRCFRQEKALKRKANFEQSKKMKERLDALRKENAL
XP_004133729.1 COX assembly mitochondrial protein 2 homolog [Cucumis sativus]4.9e-2593.65Show/hide
Query:  IIEEFQKCHLDHPIGKFLGECTDLKIKLDRCFRQEKALKRKANFEQSKKMKERLDALRKENAL
        IIE+FQKCH+DHP+GKF GECTDLKIKLDRCFRQEKALKRKANFEQSKKMKERLDALRKENAL
Subjt:  IIEEFQKCHLDHPIGKFLGECTDLKIKLDRCFRQEKALKRKANFEQSKKMKERLDALRKENAL
XP_022942557.1 COX assembly mitochondrial protein 2 homolog [Cucurbita moschata]3.4e-26100Show/hide
Query:  IIEEFQKCHLDHPIGKFLGECTDLKIKLDRCFRQEKALKRKANFEQSKKMKERLDALRKENAL
        IIEEFQKCHLDHPIGKFLGECTDLKIKLDRCFRQEKALKRKANFEQSKKMKERLDALRKENAL
Subjt:  IIEEFQKCHLDHPIGKFLGECTDLKIKLDRCFRQEKALKRKANFEQSKKMKERLDALRKENAL
XP_022984448.1 COX assembly mitochondrial protein 2 homolog [Cucurbita maxima]1.7e-2598.41Show/hide
Query:  IIEEFQKCHLDHPIGKFLGECTDLKIKLDRCFRQEKALKRKANFEQSKKMKERLDALRKENAL
        IIEEFQKCHLDHPI KFLGECTDLKIKLDRCFRQEKALKRKANFEQSKKMKERLDALRKENAL
Subjt:  IIEEFQKCHLDHPIGKFLGECTDLKIKLDRCFRQEKALKRKANFEQSKKMKERLDALRKENAL
TrEMBL top hitse value%identityAlignment
A0A0A0L3C5 COX assembly mitochondrial protein2.4e-2593.65Show/hide
Query:  IIEEFQKCHLDHPIGKFLGECTDLKIKLDRCFRQEKALKRKANFEQSKKMKERLDALRKENAL
        IIE+FQKCH+DHP+GKF GECTDLKIKLDRCFRQEKALKRKANFEQSKKMKERLDALRKENAL
Subjt:  IIEEFQKCHLDHPIGKFLGECTDLKIKLDRCFRQEKALKRKANFEQSKKMKERLDALRKENAL
A0A1S3BTB7 COX assembly mitochondrial protein6.9e-2592.06Show/hide
Query:  IIEEFQKCHLDHPIGKFLGECTDLKIKLDRCFRQEKALKRKANFEQSKKMKERLDALRKENAL
        IIE+FQKCH+DHP+GKF GECTDLKIKLD+CFRQEKALKRKANFEQSKKMKERLDALRKENAL
Subjt:  IIEEFQKCHLDHPIGKFLGECTDLKIKLDRCFRQEKALKRKANFEQSKKMKERLDALRKENAL
A0A6J1C4A0 COX assembly mitochondrial protein1.7e-2388.89Show/hide
Query:  IIEEFQKCHLDHPIGKFLGECTDLKIKLDRCFRQEKALKRKANFEQSKKMKERLDALRKENAL
        IIE+FQKCH+DHP+ KF GECTDLKIKLDRCFRQEKALKRKANFEQSKKMKERL ALRKEN+L
Subjt:  IIEEFQKCHLDHPIGKFLGECTDLKIKLDRCFRQEKALKRKANFEQSKKMKERLDALRKENAL
A0A6J1FQL3 COX assembly mitochondrial protein1.6e-26100Show/hide
Query:  IIEEFQKCHLDHPIGKFLGECTDLKIKLDRCFRQEKALKRKANFEQSKKMKERLDALRKENAL
        IIEEFQKCHLDHPIGKFLGECTDLKIKLDRCFRQEKALKRKANFEQSKKMKERLDALRKENAL
Subjt:  IIEEFQKCHLDHPIGKFLGECTDLKIKLDRCFRQEKALKRKANFEQSKKMKERLDALRKENAL
A0A6J1JAI2 COX assembly mitochondrial protein8.2e-2698.41Show/hide
Query:  IIEEFQKCHLDHPIGKFLGECTDLKIKLDRCFRQEKALKRKANFEQSKKMKERLDALRKENAL
        IIEEFQKCHLDHPI KFLGECTDLKIKLDRCFRQEKALKRKANFEQSKKMKERLDALRKENAL
Subjt:  IIEEFQKCHLDHPIGKFLGECTDLKIKLDRCFRQEKALKRKANFEQSKKMKERLDALRKENAL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G21192.1 Cytochrome c oxidase biogenesis protein Cmc1-like1.2e-2483.33Show/hide
Query:  IIEEFQKCHLDHPIGKFLGECTDLKIKLDRCFRQEKALKRKANFEQSKKMKERLDALRKE
        IIEEFQKCH+DHPIGKF GECT+LK+KLDRCFRQEKA+KRK NFEQSKK++ERL A+RKE
Subjt:  IIEEFQKCHLDHPIGKFLGECTDLKIKLDRCFRQEKALKRKANFEQSKKMKERLDALRKE
AT4G21192.2 Cytochrome c oxidase biogenesis protein Cmc1-like1.2e-2483.33Show/hide
Query:  IIEEFQKCHLDHPIGKFLGECTDLKIKLDRCFRQEKALKRKANFEQSKKMKERLDALRKE
        IIEEFQKCH+DHPIGKF GECT+LK+KLDRCFRQEKA+KRK NFEQSKK++ERL A+RKE
Subjt:  IIEEFQKCHLDHPIGKFLGECTDLKIKLDRCFRQEKALKRKANFEQSKKMKERLDALRKE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTTGCTGTGGATCTCATTATTGAGGAGTTTCAAAAGTGTCATCTAGACCATCCCATCGGAAAATTTTTGGGTGAATGCACAGATCTCAAAATTAAGCTTGATCGATGTTT
CAGGCAGGAAAAAGCTCTGAAACGAAAGGCAAACTTTGAGCAGAGTAAAAAAATGAAGGAAAGGCTAGATGCTTTAAGAAAGGAAAACGCTTTATGA
mRNA sequenceShow/hide mRNA sequence
GTTGCTGTGGATCTCATTATTGAGGAGTTTCAAAAGTGTCATCTAGACCATCCCATCGGAAAATTTTTGGGTGAATGCACAGATCTCAAAATTAAGCTTGATCGATGTTT
CAGGCAGGAAAAAGCTCTGAAACGAAAGGCAAACTTTGAGCAGAGTAAAAAAATGAAGGAAAGGCTAGATGCTTTAAGAAAGGAAAACGCTTTATGA
Protein sequenceShow/hide protein sequence
VAVDLIIEEFQKCHLDHPIGKFLGECTDLKIKLDRCFRQEKALKRKANFEQSKKMKERLDALRKENAL