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Carg00009 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg00009
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr04:4868852..4870528
RNA-Seq ExpressionCarg00009
SyntenyCarg00009
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650189.1 hypothetical protein Csa_011006, partial [Cucumis sativus]1.0e-3485.58Show/hide
Query:  MSENLSRRSSDFISFSALLSLLFVSALSDDSTPKDSIKSGNHPSSRSNTSSMIAIILLGLLVVV-LSFFLFKLWQKKRREEQYARLLKLFEEDDELEVEL
        MS N S R SDF+SFSA LSLLFVSALSDDS+ KDS  SGNHPSSRS+T SM+AIILLG+LVVV LSFFLFKLWQKKRREEQYARLLKLFEEDDELEVEL
Subjt:  MSENLSRRSSDFISFSALLSLLFVSALSDDSTPKDSIKSGNHPSSRSNTSSMIAIILLGLLVVV-LSFFLFKLWQKKRREEQYARLLKLFEEDDELEVEL

Query:  GLRD
        GLRD
Subjt:  GLRD

KAG7015450.1 hypothetical protein SDJN02_23086, partial [Cucurbita argyrosperma subsp. argyrosperma]1.7e-3282.69Show/hide
Query:  MSENLSRRSSDFISFSALLSLLFVSALSDDSTPKDSIKSGNHPSSRSNTSSMIAIILLGLLVVV-LSFFLFKLWQKKRREEQYARLLKLFEEDDELEVEL
        MS NLSRRSSD ++ SA LSLLFVSALS+DS+ KDSI SG H SS S T SM+AIILLG LVVV LSFFLFKLWQKKRREEQYARLLKLFEEDDELEVEL
Subjt:  MSENLSRRSSDFISFSALLSLLFVSALSDDSTPKDSIKSGNHPSSRSNTSSMIAIILLGLLVVV-LSFFLFKLWQKKRREEQYARLLKLFEEDDELEVEL

Query:  GLRD
        GLRD
Subjt:  GLRD

KAG7031355.1 hypothetical protein SDJN02_05395 [Cucurbita argyrosperma subsp. argyrosperma]9.3e-44100Show/hide
Query:  MSENLSRRSSDFISFSALLSLLFVSALSDDSTPKDSIKSGNHPSSRSNTSSMIAIILLGLLVVVLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELG
        MSENLSRRSSDFISFSALLSLLFVSALSDDSTPKDSIKSGNHPSSRSNTSSMIAIILLGLLVVVLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELG
Subjt:  MSENLSRRSSDFISFSALLSLLFVSALSDDSTPKDSIKSGNHPSSRSNTSSMIAIILLGLLVVVLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELG

Query:  LRD
        LRD
Subjt:  LRD

XP_016901207.1 PREDICTED: uncharacterized protein LOC103493315 [Cucumis melo]2.5e-3687.5Show/hide
Query:  MSENLSRRSSDFISFSALLSLLFVSALSDDSTPKDSIKSGNHPSSRSNTSSMIAIILLGLLV-VVLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVEL
        MS NLS R SDF+SFSA LSLLFVSALSDDS+ KDSI SGNHPSSRSNT SM+AIILLG+LV V+LSFFLFKLWQKKRREEQYARLLKLFEEDDELEVEL
Subjt:  MSENLSRRSSDFISFSALLSLLFVSALSDDSTPKDSIKSGNHPSSRSNTSSMIAIILLGLLV-VVLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVEL

Query:  GLRD
        GLRD
Subjt:  GLRD

XP_022929545.1 uncharacterized protein LOC111436082 [Cucurbita moschata]1.7e-3282.69Show/hide
Query:  MSENLSRRSSDFISFSALLSLLFVSALSDDSTPKDSIKSGNHPSSRSNTSSMIAIILLGLLVVV-LSFFLFKLWQKKRREEQYARLLKLFEEDDELEVEL
        MS NLSRRSSD ++ SA LSLLFVSALS+DS+ KDSI SG H SS S T SM+AIILLG LVVV LSFFLFKLWQKKRREEQYARLLKLFEEDDELEVEL
Subjt:  MSENLSRRSSDFISFSALLSLLFVSALSDDSTPKDSIKSGNHPSSRSNTSSMIAIILLGLLVVV-LSFFLFKLWQKKRREEQYARLLKLFEEDDELEVEL

Query:  GLRD
        GLRD
Subjt:  GLRD

TrEMBL top hitse value%identityAlignment
A0A0A0L5F0 Uncharacterized protein5.0e-3585.58Show/hide
Query:  MSENLSRRSSDFISFSALLSLLFVSALSDDSTPKDSIKSGNHPSSRSNTSSMIAIILLGLLVVV-LSFFLFKLWQKKRREEQYARLLKLFEEDDELEVEL
        MS N S R SDF+SFSA LSLLFVSALSDDS+ KDS  SGNHPSSRS+T SM+AIILLG+LVVV LSFFLFKLWQKKRREEQYARLLKLFEEDDELEVEL
Subjt:  MSENLSRRSSDFISFSALLSLLFVSALSDDSTPKDSIKSGNHPSSRSNTSSMIAIILLGLLVVV-LSFFLFKLWQKKRREEQYARLLKLFEEDDELEVEL

Query:  GLRD
        GLRD
Subjt:  GLRD

A0A1S4DZ07 uncharacterized protein LOC1034933151.2e-3687.5Show/hide
Query:  MSENLSRRSSDFISFSALLSLLFVSALSDDSTPKDSIKSGNHPSSRSNTSSMIAIILLGLLV-VVLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVEL
        MS NLS R SDF+SFSA LSLLFVSALSDDS+ KDSI SGNHPSSRSNT SM+AIILLG+LV V+LSFFLFKLWQKKRREEQYARLLKLFEEDDELEVEL
Subjt:  MSENLSRRSSDFISFSALLSLLFVSALSDDSTPKDSIKSGNHPSSRSNTSSMIAIILLGLLV-VVLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVEL

Query:  GLRD
        GLRD
Subjt:  GLRD

A0A5A7V4C4 Uncharacterized protein5.5e-2673Show/hide
Query:  LSRRSSDFISFSALLSLLFVSALSDDSTPKDSIKSGNHPSSRSNTSSMIAIILLGLLV-VVLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD
        +   + +F S S          LSDDS+ KDSI SGNHPSSRSNT SM+AIILLG+LV V+LSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD
Subjt:  LSRRSSDFISFSALLSLLFVSALSDDSTPKDSIKSGNHPSSRSNTSSMIAIILLGLLV-VVLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD

A0A6J1EUP1 uncharacterized protein LOC1114360828.0e-3382.69Show/hide
Query:  MSENLSRRSSDFISFSALLSLLFVSALSDDSTPKDSIKSGNHPSSRSNTSSMIAIILLGLLVVV-LSFFLFKLWQKKRREEQYARLLKLFEEDDELEVEL
        MS NLSRRSSD ++ SA LSLLFVSALS+DS+ KDSI SG H SS S T SM+AIILLG LVVV LSFFLFKLWQKKRREEQYARLLKLFEEDDELEVEL
Subjt:  MSENLSRRSSDFISFSALLSLLFVSALSDDSTPKDSIKSGNHPSSRSNTSSMIAIILLGLLVVV-LSFFLFKLWQKKRREEQYARLLKLFEEDDELEVEL

Query:  GLRD
        GLRD
Subjt:  GLRD

A0A6J1J6C2 uncharacterized protein LOC1114829878.0e-3382.69Show/hide
Query:  MSENLSRRSSDFISFSALLSLLFVSALSDDSTPKDSIKSGNHPSSRSNTSSMIAIILLGLLVVV-LSFFLFKLWQKKRREEQYARLLKLFEEDDELEVEL
        MS NLSRRSSD ++ SA LSLLFVSALS+DS+ KDSI SG H SS S T SM+AIILLG LVVV LSFFLFKLWQKKRREEQYARLLKLFEEDDELEVEL
Subjt:  MSENLSRRSSDFISFSALLSLLFVSALSDDSTPKDSIKSGNHPSSRSNTSSMIAIILLGLLVVV-LSFFLFKLWQKKRREEQYARLLKLFEEDDELEVEL

Query:  GLRD
        GLRD
Subjt:  GLRD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G09645.1 unknown protein2.1e-1757.14Show/hide
Query:  FSALLSLLFVSALSDDSTPKDS-IKSGNHPSSRSNTSSMIAIILLGLLVVVL-SFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD
        F A + L F   LS DS   ++ +K+ +H SS S T + + ++L+G + V + SFFL+KLWQKK+R+EQYARLLKLFEEDDELEVELGLRD
Subjt:  FSALLSLLFVSALSDDSTPKDS-IKSGNHPSSRSNTSSMIAIILLGLLVVVL-SFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD

AT1G57765.1 unknown protein2.3e-1659.76Show/hide
Query:  FVSALSDDSTPKDSIKSGNHPSSRSNTSSMIAIILLGL-LVVVLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD
        F+    D ++     K+ +H SS S T + +  ILLG   V  LSFFL+KLWQKK+R+EQYARLLKLFEEDDELEVELGLRD
Subjt:  FVSALSDDSTPKDSIKSGNHPSSRSNTSSMIAIILLGL-LVVVLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD

AT1G57765.2 unknown protein1.1e-1556.52Show/hide
Query:  FSALLSL--LFVSALSDDSTPKDSIKSGNHPSSRSNTSSMIAIILLGL-LVVVLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD
        F A+L L  ++     D ++     K+ +H SS S T + +  ILLG   V  LSFFL+KLWQKK+R+EQYARLLKLFEEDDELEVELGLRD
Subjt:  FSALLSL--LFVSALSDDSTPKDSIKSGNHPSSRSNTSSMIAIILLGL-LVVVLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD

AT3G53490.1 unknown protein1.7e-0640Show/hide
Query:  DDSTPKDSIKSGNHPSSRSNTSSMIAIILLGLLVVVLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD
        +  T K+  K G HP        +I ++LLG++ V L    +K W+KK+R+++ AR LKLFE+ D++E ELGL +
Subjt:  DDSTPKDSIKSGNHPSSRSNTSSMIAIILLGLLVVVLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCGAAAATTTGAGTCGCAGATCGTCTGATTTTATTTCGTTTTCGGCTTTGCTTTCTCTACTTTTCGTCTCCGCCCTTTCTGATGACTCCACTCCCAAAGATAGTAT
TAAATCTGGAAATCATCCATCCTCCAGAAGCAACACTAGCTCGATGATTGCAATCATCCTCCTTGGTCTTTTGGTAGTGGTGTTGTCATTTTTCCTTTTCAAGTTATGGC
AAAAAAAGAGAAGAGAGGAGCAATATGCCCGACTTCTGAAATTGTTTGAAGAAGACGATGAGCTTGAAGTTGAGCTTGGTCTTCGGGATTGA
mRNA sequenceShow/hide mRNA sequence
TTGAAGGAATTTTAATCAACCTTCTTGGTTCTTCACTCTTCAGGTAACTTCCAACCGCGTAGCGTTAGCGTGGTTTTGCAGCTTTCAGCTTTCCCTTCCACTTCCATTTC
TCTGCCGCGAGCGAGCGACAGAATTTGTTTTCGAGCTTGCCAGAAACAGATAGACAGAGATGAGCGAAAATTTGAGTCGCAGATCGTCTGATTTTATTTCGTTTTCGGCT
TTGCTTTCTCTACTTTTCGTCTCCGCCCTTTCTGATGACTCCACTCCCAAAGATAGTATTAAATCTGGAAATCATCCATCCTCCAGAAGCAACACTAGCTCGATGATTGC
AATCATCCTCCTTGGTCTTTTGGTAGTGGTGTTGTCATTTTTCCTTTTCAAGTTATGGCAAAAAAAGAGAAGAGAGGAGCAATATGCCCGACTTCTGAAATTGTTTGAAG
AAGACGATGAGCTTGAAGTTGAGCTTGGTCTTCGGGATTGAAGGATATCTGAAATTTACTTCACTGAAGTTGGTATGTCTTTGAACTCGTCATCCTTTTATTTTTCACCT
GAAATAGCTTTATACATATCTGATATGCTGGAGTGGTATTGTCATGTCTTTTAGATGATATGGTTTCTCATGATGAATTCAGTATTAGAAAATCCGTCGAACGCCATATG
TATGTTTCTATCCATGGCTGCATGACGAGTAATCATTTTTCTTCTCTAATTTATATCTCATTCAGTCTTTTTCTCTATGATGTTGCCATTAAGTTCTTATTATCCTTGGG
AGTAACACACTAAATTATGTTTAAT
Protein sequenceShow/hide protein sequence
MSENLSRRSSDFISFSALLSLLFVSALSDDSTPKDSIKSGNHPSSRSNTSSMIAIILLGLLVVVLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD