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Carg00013 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg00013
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionIdentified as a screen for stress-responsive genes.
Genome locationCarg_Chr04:4883344..4883850
RNA-Seq ExpressionCarg00013
SyntenyCarg00013
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600720.1 hypothetical protein SDJN03_05953, partial [Cucurbita argyrosperma subsp. sororia]2.1e-7799.38Show/hide
Query:  MADTYSKIEAACKLKSRSVDYSDLSSLPHSLRFAAADSNPNSRDSDQNRTNRSREPPHGCLPEEEEDEYRSAATATASTLRRNCSVSASASGFHSAVKRA
        MADTYSKIEAACKLKSRS DYSDLSSLPHSLRFAAADSNPNSRDSDQNRTNRSREPPHGCLPEEEEDEYRSAATATASTLRRNCSVSASASGFHSAVKRA
Subjt:  MADTYSKIEAACKLKSRSVDYSDLSSLPHSLRFAAADSNPNSRDSDQNRTNRSREPPHGCLPEEEEDEYRSAATATASTLRRNCSVSASASGFHSAVKRA

Query:  LSMRRSSSVAERYSRIHDQFGTLASPIDDDEIEGEESKEGRNAGGSVRKKKTNAAGKIVRA
        LSMRRSSSVAERYSRIHDQFGTLASPIDDDEIEGEESKEGRNAGGSVRKKKTNAAGKIVRA
Subjt:  LSMRRSSSVAERYSRIHDQFGTLASPIDDDEIEGEESKEGRNAGGSVRKKKTNAAGKIVRA

KAG7015455.1 hypothetical protein SDJN02_23091, partial [Cucurbita argyrosperma subsp. argyrosperma]2.2e-5071.02Show/hide
Query:  MADTYSKIEAACKLKSRSVDYSDLSSLPHSLRF--AAADSNPNSRDSDQNRTNR--SREPPHGCLPEEEEDEYRSAATATASTLRRNCSVSASASGFHSA
        MAD+YSKI+AACK KSRS+DYSDL+SLPHS RF  AAA SNPNS DS++N+TNR  SR P      EEEEDEY    +A A+ L RN SVS+S SGFHSA
Subjt:  MADTYSKIEAACKLKSRSVDYSDLSSLPHSLRF--AAADSNPNSRDSDQNRTNR--SREPPHGCLPEEEEDEYRSAATATASTLRRNCSVSASASGFHSA

Query:  VKRALSMRRSSSVAERYSRIHDQFGTLASPIDDDEIEGEESKEGRNAGGSV----RKKKTNAAGKIVRACKRLFGL
        VKRALSMRRSSSVAERY RIHDQF TLASPIDDDE+E  +SKE R  GGSV    +KKK N+AGKIVRACKRLFG+
Subjt:  VKRALSMRRSSSVAERYSRIHDQFGTLASPIDDDEIEGEESKEGRNAGGSV----RKKKTNAAGKIVRACKRLFGL

KAG7031359.1 hypothetical protein SDJN02_05399, partial [Cucurbita argyrosperma subsp. argyrosperma]2.2e-82100Show/hide
Query:  MADTYSKIEAACKLKSRSVDYSDLSSLPHSLRFAAADSNPNSRDSDQNRTNRSREPPHGCLPEEEEDEYRSAATATASTLRRNCSVSASASGFHSAVKRA
        MADTYSKIEAACKLKSRSVDYSDLSSLPHSLRFAAADSNPNSRDSDQNRTNRSREPPHGCLPEEEEDEYRSAATATASTLRRNCSVSASASGFHSAVKRA
Subjt:  MADTYSKIEAACKLKSRSVDYSDLSSLPHSLRFAAADSNPNSRDSDQNRTNRSREPPHGCLPEEEEDEYRSAATATASTLRRNCSVSASASGFHSAVKRA

Query:  LSMRRSSSVAERYSRIHDQFGTLASPIDDDEIEGEESKEGRNAGGSVRKKKTNAAGKIVRACKRLFGL
        LSMRRSSSVAERYSRIHDQFGTLASPIDDDEIEGEESKEGRNAGGSVRKKKTNAAGKIVRACKRLFGL
Subjt:  LSMRRSSSVAERYSRIHDQFGTLASPIDDDEIEGEESKEGRNAGGSVRKKKTNAAGKIVRACKRLFGL

XP_022136741.1 uncharacterized protein LOC111008371 [Momordica charantia]8.0e-5372.35Show/hide
Query:  MADTYSKIEAACKLKSRSVDYSDLSSLPHSLRFAAADSNPNS--RDSDQNRTNRSREPPHGCLPEEEEDEYRSAATATASTLRRNCSVSASASGFHSAVK
        MAD YSKI+AACK KSRS+DYSDL+SLPHSL+F AA  NPNS   +SDQNR NR+R     CLPEEEEDEY        + L RN SVS+SASG HSAVK
Subjt:  MADTYSKIEAACKLKSRSVDYSDLSSLPHSLRFAAADSNPNS--RDSDQNRTNRSREPPHGCLPEEEEDEYRSAATATASTLRRNCSVSASASGFHSAVK

Query:  RALSMRRSSSVAERYSRIHDQFGTLASPIDDDEIEGEESKEGRNAGGSVRKKKTNAAGKIVRACKRLFGL
        RALSMRRSSSVAERY RIHDQF TLASPIDD+EI   +SKE R + GSVR+KK NAAGKIVRACKRLFGL
Subjt:  RALSMRRSSSVAERYSRIHDQFGTLASPIDDDEIEGEESKEGRNAGGSVRKKKTNAAGKIVRACKRLFGL

XP_022929198.1 uncharacterized protein LOC111435863 [Cucurbita moschata]1.9e-4970.45Show/hide
Query:  MADTYSKIEAACKLKSRSVDYSDLSSLPHSLRF--AAADSNPNSRDSDQNRTNR--SREPPHGCLPEEEEDEYRSAATATASTLRRNCSVSASASGFHSA
        MAD+YSKI+AACK KSRS+DYSDL+SLPHS RF  AAA SNPNS DS++N+TNR  SR P      EEEEDEY    +A A+ L RN SVS+S SGFHSA
Subjt:  MADTYSKIEAACKLKSRSVDYSDLSSLPHSLRF--AAADSNPNSRDSDQNRTNR--SREPPHGCLPEEEEDEYRSAATATASTLRRNCSVSASASGFHSA

Query:  VKRALSMRRSSSVAERYSRIHDQFGTLASPIDDDEIEGEESKEGRNAGGSV----RKKKTNAAGKIVRACKRLFGL
        VKRALSMRRSSSVAERY RIHDQF TLASPIDDDE+E  +SKE R  GGSV    +KKK N+A KIVRACKRLFG+
Subjt:  VKRALSMRRSSSVAERYSRIHDQFGTLASPIDDDEIEGEESKEGRNAGGSV----RKKKTNAAGKIVRACKRLFGL

TrEMBL top hitse value%identityAlignment
A0A0A0L2N9 Uncharacterized protein2.3e-4566.1Show/hide
Query:  MADTYSKIEAACKLKSRSVDYSDLSSLPHSLRFAAADSNPNSRDSDQNRTNRSREPPHGCLPEEEED------EYRSAATATASTLRRNCSVSASASGFH
        MAD YSKI+AA K KSRS+DYSDLSSLPHSL F+AA SNP        RTNR +EPPHG LPEE+E+      +    AT  A+TL RN SVS+S SGF 
Subjt:  MADTYSKIEAACKLKSRSVDYSDLSSLPHSLRFAAADSNPNSRDSDQNRTNRSREPPHGCLPEEEED------EYRSAATATASTLRRNCSVSASASGFH

Query:  SAVKRALSMRRSSSVAERYSRIHDQFGTLASPIDDDEIEGEESKEGRNAGGS---VRKKKTNAAGKIVRACKRLFGL
        SAVKRALSMRRSSSVAERY RIHDQF T ASPI+DDE+EG + KE    GGS    +KKK NAA KIVRACKR+FGL
Subjt:  SAVKRALSMRRSSSVAERYSRIHDQFGTLASPIDDDEIEGEESKEGRNAGGS---VRKKKTNAAGKIVRACKRLFGL

A0A5A7V402 Uncharacterized protein4.3e-4468.42Show/hide
Query:  MADTYSKIEAACKLKSRSVDYSDLSSLPHSLRF-AAADSNPNSRDSDQNRTNRSREPPHGCLPEEEE----DEY-RSAATATASTLRRNCSVSASASGFH
        MAD YSKI+AACK KSRS+DYSDLSSLPHSL F  AA SNP S  S+ +RTNR +EPPH  LPEE+E    DE  R      A+TL RN SVS+S SGF 
Subjt:  MADTYSKIEAACKLKSRSVDYSDLSSLPHSLRF-AAADSNPNSRDSDQNRTNRSREPPHGCLPEEEE----DEY-RSAATATASTLRRNCSVSASASGFH

Query:  SAVKRALSMRRSSSVAERYSRIHDQFGTLASPIDDDEIEGEESKEGRNAGGSV--RKKKTNAAGKIVRACK
        SAVKRALSMRRSSSVAERY RIHDQF T ASPI+DDE+EG +SKE    GGS   +KKKTNAAGKIVRA +
Subjt:  SAVKRALSMRRSSSVAERYSRIHDQFGTLASPIDDDEIEGEESKEGRNAGGSV--RKKKTNAAGKIVRACK

A0A5N6QLE4 Uncharacterized protein1.2e-1746.34Show/hide
Query:  YSKIEAACKLKSRSVDYSDLSSLPHSLRFAAADSNPNSRDSDQNRTNRSREPPHGCLPEEEEDEYRSAATATASTLRRNCSVSASASGFHSAVKRALSMR
        YSK++A    KSRS+D+SD  S   + +    +S+P S+  + ++   S          E+ED          + L R+CSVS S SGF SAVKRA S++
Subjt:  YSKIEAACKLKSRSVDYSDLSSLPHSLRFAAADSNPNSRDSDQNRTNRSREPPHGCLPEEEEDEYRSAATATASTLRRNCSVSASASGFHSAVKRALSMR

Query:  RSSSVAERYSRIHDQFGTLASPIDDDEIEGEESKEGRNAGGSVRKKKTNAAGKIVRACKRLFGL
        RSSSV+ERY RI+DQ  TLASPIDDD+ EG ++   R    SV+KKK +  GKI++ACKRLFGL
Subjt:  RSSSVAERYSRIHDQFGTLASPIDDDEIEGEESKEGRNAGGSVRKKKTNAAGKIVRACKRLFGL

A0A6J1C4C9 uncharacterized protein LOC1110083713.9e-5372.35Show/hide
Query:  MADTYSKIEAACKLKSRSVDYSDLSSLPHSLRFAAADSNPNS--RDSDQNRTNRSREPPHGCLPEEEEDEYRSAATATASTLRRNCSVSASASGFHSAVK
        MAD YSKI+AACK KSRS+DYSDL+SLPHSL+F AA  NPNS   +SDQNR NR+R     CLPEEEEDEY        + L RN SVS+SASG HSAVK
Subjt:  MADTYSKIEAACKLKSRSVDYSDLSSLPHSLRFAAADSNPNS--RDSDQNRTNRSREPPHGCLPEEEEDEYRSAATATASTLRRNCSVSASASGFHSAVK

Query:  RALSMRRSSSVAERYSRIHDQFGTLASPIDDDEIEGEESKEGRNAGGSVRKKKTNAAGKIVRACKRLFGL
        RALSMRRSSSVAERY RIHDQF TLASPIDD+EI   +SKE R + GSVR+KK NAAGKIVRACKRLFGL
Subjt:  RALSMRRSSSVAERYSRIHDQFGTLASPIDDDEIEGEESKEGRNAGGSVRKKKTNAAGKIVRACKRLFGL

A0A6J1ERE9 uncharacterized protein LOC1114358639.0e-5070.45Show/hide
Query:  MADTYSKIEAACKLKSRSVDYSDLSSLPHSLRF--AAADSNPNSRDSDQNRTNR--SREPPHGCLPEEEEDEYRSAATATASTLRRNCSVSASASGFHSA
        MAD+YSKI+AACK KSRS+DYSDL+SLPHS RF  AAA SNPNS DS++N+TNR  SR P      EEEEDEY    +A A+ L RN SVS+S SGFHSA
Subjt:  MADTYSKIEAACKLKSRSVDYSDLSSLPHSLRF--AAADSNPNSRDSDQNRTNR--SREPPHGCLPEEEEDEYRSAATATASTLRRNCSVSASASGFHSA

Query:  VKRALSMRRSSSVAERYSRIHDQFGTLASPIDDDEIEGEESKEGRNAGGSV----RKKKTNAAGKIVRACKRLFGL
        VKRALSMRRSSSVAERY RIHDQF TLASPIDDDE+E  +SKE R  GGSV    +KKK N+A KIVRACKRLFG+
Subjt:  VKRALSMRRSSSVAERYSRIHDQFGTLASPIDDDEIEGEESKEGRNAGGSV----RKKKTNAAGKIVRACKRLFGL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G24275.1 Identified as a screen for stress-responsive genes.1.1e-0739.23Show/hide
Query:  SDQNRTNRSREPPHGCL-PEEEEDEYRSAATATASTLRRNCSVSASASGFHSAVKRALSMRRSSSVAERYSRIHDQFGTLASPI---DDDEIEGEESKEG
        S  + T++  EP H  + P+ ++ +   A       L RN SVSASA    S +K  +SMRRSSSV+ERY RI+DQ      P+   + DE E ++ KE 
Subjt:  SDQNRTNRSREPPHGCL-PEEEEDEYRSAATATASTLRRNCSVSASASGFHSAVKRALSMRRSSSVAERYSRIHDQFGTLASPI---DDDEIEGEESKEG

Query:  RNAGGSVRKKKTNAAGK--IVRACKRLFGL
         +     +KKK+N   K   V+ACKR FG+
Subjt:  RNAGGSVRKKKTNAAGK--IVRACKRLFGL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGATACCTACTCCAAGATCGAAGCCGCCTGCAAATTGAAATCAAGATCTGTAGATTACTCCGATCTTTCATCGCTCCCTCACTCTCTTAGATTCGCCGCTGCCGA
CTCCAATCCGAACTCTCGCGATTCCGATCAAAACAGGACGAATCGGTCGCGGGAGCCGCCGCATGGTTGCTTGCCAGAGGAGGAAGAAGACGAATACCGCAGCGCTGCAA
CCGCTACTGCCTCTACGCTGAGACGGAACTGCTCTGTTTCTGCATCGGCCTCCGGATTCCACTCAGCAGTGAAGAGAGCTCTGTCGATGCGACGATCTTCGTCTGTGGCG
GAGCGGTACAGTAGGATTCACGATCAGTTCGGGACGCTTGCATCGCCGATCGACGACGATGAAATCGAAGGCGAAGAATCGAAGGAAGGCCGAAATGCAGGAGGATCTGT
AAGGAAGAAGAAGACGAACGCGGCTGGGAAGATCGTTAGAGCTTGTAAGCGACTTTTTGGACTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCGATACCTACTCCAAGATCGAAGCCGCCTGCAAATTGAAATCAAGATCTGTAGATTACTCCGATCTTTCATCGCTCCCTCACTCTCTTAGATTCGCCGCTGCCGA
CTCCAATCCGAACTCTCGCGATTCCGATCAAAACAGGACGAATCGGTCGCGGGAGCCGCCGCATGGTTGCTTGCCAGAGGAGGAAGAAGACGAATACCGCAGCGCTGCAA
CCGCTACTGCCTCTACGCTGAGACGGAACTGCTCTGTTTCTGCATCGGCCTCCGGATTCCACTCAGCAGTGAAGAGAGCTCTGTCGATGCGACGATCTTCGTCTGTGGCG
GAGCGGTACAGTAGGATTCACGATCAGTTCGGGACGCTTGCATCGCCGATCGACGACGATGAAATCGAAGGCGAAGAATCGAAGGAAGGCCGAAATGCAGGAGGATCTGT
AAGGAAGAAGAAGACGAACGCGGCTGGGAAGATCGTTAGAGCTTGTAAGCGACTTTTTGGACTGTAG
Protein sequenceShow/hide protein sequence
MADTYSKIEAACKLKSRSVDYSDLSSLPHSLRFAAADSNPNSRDSDQNRTNRSREPPHGCLPEEEEDEYRSAATATASTLRRNCSVSASASGFHSAVKRALSMRRSSSVA
ERYSRIHDQFGTLASPIDDDEIEGEESKEGRNAGGSVRKKKTNAAGKIVRACKRLFGL