; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg00015 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg00015
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionPMD domain-containing protein
Genome locationCarg_Chr04:4890683..4892567
RNA-Seq ExpressionCarg00015
SyntenyCarg00015
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600722.1 hypothetical protein SDJN03_05955, partial [Cucurbita argyrosperma subsp. sororia]2.6e-76100Show/hide
Query:  MSEIGSERSKSWNIYTTPDQSPSSQTGIGQEAPWKNFGSSMNAISFGFVATAILISMFLIMAIFEHLFRPTSSFSSSGEVTNNFAQSGPVEKFASPNTVP
        MSEIGSERSKSWNIYTTPDQSPSSQTGIGQEAPWKNFGSSMNAISFGFVATAILISMFLIMAIFEHLFRPTSSFSSSGEVTNNFAQSGPVEKFASPNTVP
Subjt:  MSEIGSERSKSWNIYTTPDQSPSSQTGIGQEAPWKNFGSSMNAISFGFVATAILISMFLIMAIFEHLFRPTSSFSSSGEVTNNFAQSGPVEKFASPNTVP

Query:  TSYAADFSVLMPGQHIPTFIAQPAPLPCQREGTYWPSHDHNFSGP
        TSYAADFSVLMPGQHIPTFIAQPAPLPCQREGTYWPSHDHNFSGP
Subjt:  TSYAADFSVLMPGQHIPTFIAQPAPLPCQREGTYWPSHDHNFSGP

XP_004133716.1 uncharacterized protein LOC101206733 isoform X1 [Cucumis sativus]2.0e-6891.03Show/hide
Query:  MSEIGSERSKSWNIYTTPDQSPSSQTGIGQEAPWKNFGSSMNAISFGFVATAILISMFLIMAIFEHLFRPTSSFSSSGEVTNNFAQSGPVEKFASPNTVP
        MSEIGSERSKSWNIYTTPDQSPSSQTGIGQEAPWKNFGSSMNAISFGFVATAILISMFL+MAIFEHLFRP+S FSSS EVTNN ++S P EKFASPNTV 
Subjt:  MSEIGSERSKSWNIYTTPDQSPSSQTGIGQEAPWKNFGSSMNAISFGFVATAILISMFLIMAIFEHLFRPTSSFSSSGEVTNNFAQSGPVEKFASPNTVP

Query:  TSYAADFSVLMPGQHIPTFIAQPAPLPCQREGTYWPSHDHNFSGP
        TSYA+DFSVLMPGQHIPTFIAQPAPLPCQREG YWPSH HNFSGP
Subjt:  TSYAADFSVLMPGQHIPTFIAQPAPLPCQREGTYWPSHDHNFSGP

XP_022942533.1 uncharacterized protein LOC111447541 [Cucurbita moschata]2.9e-7598.62Show/hide
Query:  MSEIGSERSKSWNIYTTPDQSPSSQTGIGQEAPWKNFGSSMNAISFGFVATAILISMFLIMAIFEHLFRPTSSFSSSGEVTNNFAQSGPVEKFASPNTVP
        MSEIGSERSKSWNIYTTPDQSPSSQTGIGQ+APWKNFGSSMNAISFGFVATAILISMFLIMAIFEHLFRPTSSFSSSGEVTNNFAQSGPVEKFASPNTVP
Subjt:  MSEIGSERSKSWNIYTTPDQSPSSQTGIGQEAPWKNFGSSMNAISFGFVATAILISMFLIMAIFEHLFRPTSSFSSSGEVTNNFAQSGPVEKFASPNTVP

Query:  TSYAADFSVLMPGQHIPTFIAQPAPLPCQREGTYWPSHDHNFSGP
        TSYAADFSVLMPGQHIPTFIAQPAPLPCQREGTYWPSHDHNF GP
Subjt:  TSYAADFSVLMPGQHIPTFIAQPAPLPCQREGTYWPSHDHNFSGP

XP_022983836.1 uncharacterized protein LOC111482330 [Cucurbita maxima]2.6e-76100Show/hide
Query:  MSEIGSERSKSWNIYTTPDQSPSSQTGIGQEAPWKNFGSSMNAISFGFVATAILISMFLIMAIFEHLFRPTSSFSSSGEVTNNFAQSGPVEKFASPNTVP
        MSEIGSERSKSWNIYTTPDQSPSSQTGIGQEAPWKNFGSSMNAISFGFVATAILISMFLIMAIFEHLFRPTSSFSSSGEVTNNFAQSGPVEKFASPNTVP
Subjt:  MSEIGSERSKSWNIYTTPDQSPSSQTGIGQEAPWKNFGSSMNAISFGFVATAILISMFLIMAIFEHLFRPTSSFSSSGEVTNNFAQSGPVEKFASPNTVP

Query:  TSYAADFSVLMPGQHIPTFIAQPAPLPCQREGTYWPSHDHNFSGP
        TSYAADFSVLMPGQHIPTFIAQPAPLPCQREGTYWPSHDHNFSGP
Subjt:  TSYAADFSVLMPGQHIPTFIAQPAPLPCQREGTYWPSHDHNFSGP

XP_023540824.1 uncharacterized protein LOC111801082 [Cucurbita pepo subsp. pepo]2.9e-7598.62Show/hide
Query:  MSEIGSERSKSWNIYTTPDQSPSSQTGIGQEAPWKNFGSSMNAISFGFVATAILISMFLIMAIFEHLFRPTSSFSSSGEVTNNFAQSGPVEKFASPNTVP
        MSEIGSERSKSWNIYTTPDQSPSSQ GIGQEAPWKNFGSSMNAISFGFVATAILISMFLIMAIFEHLFRPTSSFSSSGEVTNNFAQSGPVEKF+SPNTVP
Subjt:  MSEIGSERSKSWNIYTTPDQSPSSQTGIGQEAPWKNFGSSMNAISFGFVATAILISMFLIMAIFEHLFRPTSSFSSSGEVTNNFAQSGPVEKFASPNTVP

Query:  TSYAADFSVLMPGQHIPTFIAQPAPLPCQREGTYWPSHDHNFSGP
        TSYAADFSVLMPGQHIPTFIAQPAPLPCQREGTYWPSHDHNFSGP
Subjt:  TSYAADFSVLMPGQHIPTFIAQPAPLPCQREGTYWPSHDHNFSGP

TrEMBL top hitse value%identityAlignment
A0A0A0L6N7 Uncharacterized protein9.7e-6991.03Show/hide
Query:  MSEIGSERSKSWNIYTTPDQSPSSQTGIGQEAPWKNFGSSMNAISFGFVATAILISMFLIMAIFEHLFRPTSSFSSSGEVTNNFAQSGPVEKFASPNTVP
        MSEIGSERSKSWNIYTTPDQSPSSQTGIGQEAPWKNFGSSMNAISFGFVATAILISMFL+MAIFEHLFRP+S FSSS EVTNN ++S P EKFASPNTV 
Subjt:  MSEIGSERSKSWNIYTTPDQSPSSQTGIGQEAPWKNFGSSMNAISFGFVATAILISMFLIMAIFEHLFRPTSSFSSSGEVTNNFAQSGPVEKFASPNTVP

Query:  TSYAADFSVLMPGQHIPTFIAQPAPLPCQREGTYWPSHDHNFSGP
        TSYA+DFSVLMPGQHIPTFIAQPAPLPCQREG YWPSH HNFSGP
Subjt:  TSYAADFSVLMPGQHIPTFIAQPAPLPCQREGTYWPSHDHNFSGP

A0A1S4DZ08 uncharacterized protein LOC1034933221.1e-6791.03Show/hide
Query:  MSEIGSERSKSWNIYTTPDQSPSSQTGIGQEAPWKNFGSSMNAISFGFVATAILISMFLIMAIFEHLFRPTSSFSSSGEVTNNFAQSGPVEKFASPNTVP
        MSEIGSERSKSWNIYTTPDQSPSSQTGIGQEAPWKNFGSSMNAISFGFVATAILISMFL+MAIFEHLFRP+S FSSS EVTNN ++S P EKFASPNTV 
Subjt:  MSEIGSERSKSWNIYTTPDQSPSSQTGIGQEAPWKNFGSSMNAISFGFVATAILISMFLIMAIFEHLFRPTSSFSSSGEVTNNFAQSGPVEKFASPNTVP

Query:  TSYAADFSVLMPGQHIPTFIAQPAPLPCQREGTYWPSHDHNFSGP
        TSYA+DFSVLMPGQHIPTFIAQPAPLPCQREG YWPSH HNFSGP
Subjt:  TSYAADFSVLMPGQHIPTFIAQPAPLPCQREGTYWPSHDHNFSGP

A0A5D3BTG7 Uncharacterized protein1.1e-6791.03Show/hide
Query:  MSEIGSERSKSWNIYTTPDQSPSSQTGIGQEAPWKNFGSSMNAISFGFVATAILISMFLIMAIFEHLFRPTSSFSSSGEVTNNFAQSGPVEKFASPNTVP
        MSEIGSERSKSWNIYTTPDQSPSSQTGIGQEAPWKNFGSSMNAISFGFVATAILISMFL+MAIFEHLFRP+S FSSS EVTNN ++S P EKFASPNTV 
Subjt:  MSEIGSERSKSWNIYTTPDQSPSSQTGIGQEAPWKNFGSSMNAISFGFVATAILISMFLIMAIFEHLFRPTSSFSSSGEVTNNFAQSGPVEKFASPNTVP

Query:  TSYAADFSVLMPGQHIPTFIAQPAPLPCQREGTYWPSHDHNFSGP
        TSYA+DFSVLMPGQHIPTFIAQPAPLPCQREG YWPSH HNFSGP
Subjt:  TSYAADFSVLMPGQHIPTFIAQPAPLPCQREGTYWPSHDHNFSGP

A0A6J1FV27 uncharacterized protein LOC1114475411.4e-7598.62Show/hide
Query:  MSEIGSERSKSWNIYTTPDQSPSSQTGIGQEAPWKNFGSSMNAISFGFVATAILISMFLIMAIFEHLFRPTSSFSSSGEVTNNFAQSGPVEKFASPNTVP
        MSEIGSERSKSWNIYTTPDQSPSSQTGIGQ+APWKNFGSSMNAISFGFVATAILISMFLIMAIFEHLFRPTSSFSSSGEVTNNFAQSGPVEKFASPNTVP
Subjt:  MSEIGSERSKSWNIYTTPDQSPSSQTGIGQEAPWKNFGSSMNAISFGFVATAILISMFLIMAIFEHLFRPTSSFSSSGEVTNNFAQSGPVEKFASPNTVP

Query:  TSYAADFSVLMPGQHIPTFIAQPAPLPCQREGTYWPSHDHNFSGP
        TSYAADFSVLMPGQHIPTFIAQPAPLPCQREGTYWPSHDHNF GP
Subjt:  TSYAADFSVLMPGQHIPTFIAQPAPLPCQREGTYWPSHDHNFSGP

A0A6J1J0H1 uncharacterized protein LOC1114823301.3e-76100Show/hide
Query:  MSEIGSERSKSWNIYTTPDQSPSSQTGIGQEAPWKNFGSSMNAISFGFVATAILISMFLIMAIFEHLFRPTSSFSSSGEVTNNFAQSGPVEKFASPNTVP
        MSEIGSERSKSWNIYTTPDQSPSSQTGIGQEAPWKNFGSSMNAISFGFVATAILISMFLIMAIFEHLFRPTSSFSSSGEVTNNFAQSGPVEKFASPNTVP
Subjt:  MSEIGSERSKSWNIYTTPDQSPSSQTGIGQEAPWKNFGSSMNAISFGFVATAILISMFLIMAIFEHLFRPTSSFSSSGEVTNNFAQSGPVEKFASPNTVP

Query:  TSYAADFSVLMPGQHIPTFIAQPAPLPCQREGTYWPSHDHNFSGP
        TSYAADFSVLMPGQHIPTFIAQPAPLPCQREGTYWPSHDHNFSGP
Subjt:  TSYAADFSVLMPGQHIPTFIAQPAPLPCQREGTYWPSHDHNFSGP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G09812.1 unknown protein1.6e-2653.79Show/hide
Query:  RSKSWNIYTTPDQSPSSQTGIGQEAPWKNFGSSMNAISFGFVATAILISMFLIMAIFEHLFRP-TSSFSSSGEVTNNFAQ-SGPVEKFA-SPNTVPTSYA
        +S SW+IY +P +  S       E PW++  +SMNAISFGFVATAILISMFLIMAIFEHLFRP  SSF S  ++       S   +K A   + VP S  
Subjt:  RSKSWNIYTTPDQSPSSQTGIGQEAPWKNFGSSMNAISFGFVATAILISMFLIMAIFEHLFRP-TSSFSSSGEVTNNFAQ-SGPVEKFA-SPNTVPTSYA

Query:  ADFSVLMPGQHIPTFIAQPAPLPCQREGTYWP
         D SV+MPG+ +P+ IA PAPLPC+REG +WP
Subjt:  ADFSVLMPGQHIPTFIAQPAPLPCQREGTYWP

AT1G11120.1 unknown protein8.6e-1742Show/hide
Query:  QEAPWKN-FGSSMNAISFGFVATAILISMFLIMAIFEHLFR-----PTSSFSSSGEV----TNNFAQSGPVEKF------ASPNTV--------------
        +E PWK+ F  S+NA+SFGFVATAILISMFL+MAIFE L R      T+S SSS  V     +    +G   K       AS N +              
Subjt:  QEAPWKN-FGSSMNAISFGFVATAILISMFLIMAIFEHLFR-----PTSSFSSSGEV----TNNFAQSGPVEKF------ASPNTV--------------

Query:  ------PTSYAADFSVLMPGQHIPTFIAQPAPLPCQREGTYWPSHDHNFS
               T Y+   SVLMPG  IPTFIA PAP+PC  +      H H  S
Subjt:  ------PTSYAADFSVLMPGQHIPTFIAQPAPLPCQREGTYWPSHDHNFS

AT1G11120.2 unknown protein3.7e-2048.39Show/hide
Query:  QEAPWKN-FGSSMNAISFGFVATAILISMFLIMAIFEHLFR-----PTSSFSSSGEV----TNNFAQSGPVEKFASPNTVPTSYAADFSVLMPGQHIPTF
        +E PWK+ F  S+NA+SFGFVATAILISMFL+MAIFE L R      T+S SSS  V     +    +G   K    +   T Y+   SVLMPG  IPTF
Subjt:  QEAPWKN-FGSSMNAISFGFVATAILISMFLIMAIFEHLFR-----PTSSFSSSGEV----TNNFAQSGPVEKFASPNTVPTSYAADFSVLMPGQHIPTF

Query:  IAQPAPLPCQREGTYWPSHDHNFS
        IA PAP+PC  +      H H  S
Subjt:  IAQPAPLPCQREGTYWPSHDHNFS

AT1G58007.1 unknown protein8.0e-2348.12Show/hide
Query:  SERSKSWNIYTTPDQSPSSQTGIGQEAPWKNFGSSMNAISFGFVATAILISMFLIMAIFEHLFRPTSSFSSSGEVTNNFAQSGPVEKFASPNTVPTSYAA
        S   ++W+IY T D S                GSSMNAISFGFVATAILI MF+IMAI EHLFR  S  SSS +V +    S   +K A   ++     +
Subjt:  SERSKSWNIYTTPDQSPSSQTGIGQEAPWKNFGSSMNAISFGFVATAILISMFLIMAIFEHLFRPTSSFSSSGEVTNNFAQSGPVEKFASPNTVPTSYAA

Query:  DFSVLMPGQHIPTFIAQPAPLPCQREGTYWPSH
        D SV+MPG  +P+++A PAP PC+REG  WPSH
Subjt:  DFSVLMPGQHIPTFIAQPAPLPCQREGTYWPSH

AT1G58007.2 unknown protein8.0e-2348.12Show/hide
Query:  SERSKSWNIYTTPDQSPSSQTGIGQEAPWKNFGSSMNAISFGFVATAILISMFLIMAIFEHLFRPTSSFSSSGEVTNNFAQSGPVEKFASPNTVPTSYAA
        S   ++W+IY T D S                GSSMNAISFGFVATAILI MF+IMAI EHLFR  S  SSS +V +    S   +K A   ++     +
Subjt:  SERSKSWNIYTTPDQSPSSQTGIGQEAPWKNFGSSMNAISFGFVATAILISMFLIMAIFEHLFRPTSSFSSSGEVTNNFAQSGPVEKFASPNTVPTSYAA

Query:  DFSVLMPGQHIPTFIAQPAPLPCQREGTYWPSH
        D SV+MPG  +P+++A PAP PC+REG  WPSH
Subjt:  DFSVLMPGQHIPTFIAQPAPLPCQREGTYWPSH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGAGATTGGTTCTGAAAGATCAAAGTCATGGAACATATACACAACTCCAGACCAGAGCCCATCATCTCAAACAGGCATTGGTCAAGAAGCTCCTTGGAAGAACTT
TGGATCCTCCATGAATGCCATTTCCTTTGGCTTTGTTGCTACTGCAATCTTGATATCCATGTTCCTTATCATGGCCATCTTTGAGCATCTTTTTAGACCAACTTCTTCTT
TCTCCTCCTCTGGTGAAGTGACCAACAACTTTGCACAATCGGGTCCGGTCGAGAAATTCGCTAGTCCAAATACGGTGCCAACATCATATGCAGCTGATTTCTCAGTGTTG
ATGCCAGGTCAGCACATCCCCACCTTCATTGCCCAGCCAGCCCCTCTGCCATGCCAAAGAGAGGGGACTTATTGGCCATCTCACGACCATAATTTTTCAGGCCCTTGA
mRNA sequenceShow/hide mRNA sequence
TAAAGTGGAAAGTGTGAGCTGGGTTGGCTACTTTATTAAATATTGCTTTGAGAAAAATAGATGTCTTGTTTTTTGATGACAGGTTAACCATGGAATTGGAAGTTTTGGAT
GCAAACTATCCTTCATAGCCTAAACCAATACTTTAGAAGCTCTTAAGAAACCGATTAGTTTATAGCCAGATGGTTCGCTTCATTTTCGATATCGCGACATCAGAATAATC
GACCGCTATCACAGAGGAGGATCTTGGACATCTTCTTCATTTTCTCTTGGCTTCTTTTCTTTTCAGGGATATGGATCATCAGCTATACATTCTTATGTAGAAGCCATTTT
TATCAGCTTCATTTTTGCTCCAAGCTTTTAGTTGAGGAAGAGATAAGCCACCATCTCAAAGTTAAAGGTATGAGTGAGATTGGTTCTGAAAGATCAAAGTCATGGAACAT
ATACACAACTCCAGACCAGAGCCCATCATCTCAAACAGGCATTGGTCAAGAAGCTCCTTGGAAGAACTTTGGATCCTCCATGAATGCCATTTCCTTTGGCTTTGTTGCTA
CTGCAATCTTGATATCCATGTTCCTTATCATGGCCATCTTTGAGCATCTTTTTAGACCAACTTCTTCTTTCTCCTCCTCTGGTGAAGTGACCAACAACTTTGCACAATCG
GGTCCGGTCGAGAAATTCGCTAGTCCAAATACGGTGCCAACATCATATGCAGCTGATTTCTCAGTGTTGATGCCAGGTCAGCACATCCCCACCTTCATTGCCCAGCCAGC
CCCTCTGCCATGCCAAAGAGAGGGGACTTATTGGCCATCTCACGACCATAATTTTTCAGGCCCTTGAAACAAAGATGATATTTCTTGCCTCCATTGGAAGCAGCTGCTGC
ATTTAGGAAAACTGCCAGCTTTGCTTCTTCTCAGAATAATAATTCTTGTGCTCCTTCTTCACCCACTGGGAGATTTGCTCAAATGCTTGTTCTTTTTCAGTTTCTGATCT
GTAAATTGATTATAAAAGAATGGCACAAGTTCTTCCACGATTTCAAGGTGTAAGTAGATATCACTTCACTTCCTCACTACAGTGAGAAGGTGCTTTAAAATTCAACATTT
TGAAAGGAAAGTGTTTCTGTATAAGCTCTCATATATGGCTACAAACACAAGGAACATTTAAAATCTCTACTTATCCACAGAAGACCTGAAAATGTTATG
Protein sequenceShow/hide protein sequence
MSEIGSERSKSWNIYTTPDQSPSSQTGIGQEAPWKNFGSSMNAISFGFVATAILISMFLIMAIFEHLFRPTSSFSSSGEVTNNFAQSGPVEKFASPNTVPTSYAADFSVL
MPGQHIPTFIAQPAPLPCQREGTYWPSHDHNFSGP