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Carg00028 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg00028
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr04:4945623..4946334
RNA-Seq ExpressionCarg00028
SyntenyCarg00028
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7031374.1 hypothetical protein SDJN02_05414, partial [Cucurbita argyrosperma subsp. argyrosperma]2.2e-31100Show/hide
Query:  MYIYFTCFLNVVMLDVLCAVITDYLAQYFQKDMGGRGVIGLYMVAQERQLQNRRRMLAESLKDVESGGCGESV
        MYIYFTCFLNVVMLDVLCAVITDYLAQYFQKDMGGRGVIGLYMVAQERQLQNRRRMLAESLKDVESGGCGESV
Subjt:  MYIYFTCFLNVVMLDVLCAVITDYLAQYFQKDMGGRGVIGLYMVAQERQLQNRRRMLAESLKDVESGGCGESV

XP_022929341.1 uncharacterized protein LOC111435944 [Cucurbita moschata]3.8e-0764.41Show/hide
Query:  MGGRGVI------------------GLYMVAQERQLQNRRRMLAESLKDVESGGCGESV
        MGGRGVI                  GLYMVAQERQLQNR RMLAESLKDVESGG GE+V
Subjt:  MGGRGVI------------------GLYMVAQERQLQNRRRMLAESLKDVESGGCGESV

XP_022943152.1 uncharacterized protein LOC111447969 [Cucurbita moschata]1.7e-0764.41Show/hide
Query:  MGGRGV------------------IGLYMVAQERQLQNRRRMLAESLKDVESGGCGESV
        MGGRGV                  IGLYMV+QERQLQNRRRMLAESLKDVESGG GE+V
Subjt:  MGGRGV------------------IGLYMVAQERQLQNRRRMLAESLKDVESGGCGESV

XP_023003115.1 uncharacterized protein LOC111496793 [Cucurbita maxima]6.9e-0967.8Show/hide
Query:  MGGRGV------------------IGLYMVAQERQLQNRRRMLAESLKDVESGGCGESV
        MGGRGV                  IGLYMVAQERQLQNR+RMLAESLKDVESGGCGESV
Subjt:  MGGRGV------------------IGLYMVAQERQLQNRRRMLAESLKDVESGGCGESV

XP_023540165.1 uncharacterized protein LOC111800616 [Cucurbita pepo subsp. pepo]6.9e-0967.8Show/hide
Query:  MGGRGV------------------IGLYMVAQERQLQNRRRMLAESLKDVESGGCGESV
        MGGRGV                  IGLYMVAQERQLQNR+RMLAESLKDVESGGCGESV
Subjt:  MGGRGV------------------IGLYMVAQERQLQNRRRMLAESLKDVESGGCGESV

TrEMBL top hitse value%identityAlignment
A0A0A0L386 Uncharacterized protein4.1e-0760.66Show/hide
Query:  KDMGGRG------------------VIGLYMVAQERQLQNRRRMLAESLKDVESGGCGESV
        KDMGGRG                  VIG+YMVAQERQLQNR+RML ESLKDVESGG  E+V
Subjt:  KDMGGRG------------------VIGLYMVAQERQLQNRRRMLAESLKDVESGGCGESV

A0A6J1CPB9 uncharacterized protein LOC1110128744.1e-0762.71Show/hide
Query:  MGGRGV------------------IGLYMVAQERQLQNRRRMLAESLKDVESGGCGESV
        MGGRGV                  IGLYMVAQERQLQNR+RMLAESL DVESGG GE+V
Subjt:  MGGRGV------------------IGLYMVAQERQLQNRRRMLAESLKDVESGGCGESV

A0A6J1EMV3 uncharacterized protein LOC1114359441.8e-0764.41Show/hide
Query:  MGGRGVI------------------GLYMVAQERQLQNRRRMLAESLKDVESGGCGESV
        MGGRGVI                  GLYMVAQERQLQNR RMLAESLKDVESGG GE+V
Subjt:  MGGRGVI------------------GLYMVAQERQLQNRRRMLAESLKDVESGGCGESV

A0A6J1FS83 uncharacterized protein LOC1114479698.2e-0864.41Show/hide
Query:  MGGRGV------------------IGLYMVAQERQLQNRRRMLAESLKDVESGGCGESV
        MGGRGV                  IGLYMV+QERQLQNRRRMLAESLKDVESGG GE+V
Subjt:  MGGRGV------------------IGLYMVAQERQLQNRRRMLAESLKDVESGGCGESV

A0A6J1KQV7 uncharacterized protein LOC1114967933.3e-0967.8Show/hide
Query:  MGGRGV------------------IGLYMVAQERQLQNRRRMLAESLKDVESGGCGESV
        MGGRGV                  IGLYMVAQERQLQNR+RMLAESLKDVESGGCGESV
Subjt:  MGGRGV------------------IGLYMVAQERQLQNRRRMLAESLKDVESGGCGESV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G15395.1 unknown protein2.9e-0565.71Show/hide
Query:  IGLYMVAQERQLQNRRRMLAESLKDVESGGCGESV
        IGLYMVA ERQ QNR R +AESL+  ES G G++V
Subjt:  IGLYMVAQERQLQNRRRMLAESLKDVESGGCGESV

AT3G15395.2 unknown protein2.9e-0565.71Show/hide
Query:  IGLYMVAQERQLQNRRRMLAESLKDVESGGCGESV
        IGLYMVA ERQ QNR R +AESL+  ES G G++V
Subjt:  IGLYMVAQERQLQNRRRMLAESLKDVESGGCGESV

AT3G15395.3 unknown protein2.9e-0565.71Show/hide
Query:  IGLYMVAQERQLQNRRRMLAESLKDVESGGCGESV
        IGLYMVA ERQ QNR R +AESL+  ES G G++V
Subjt:  IGLYMVAQERQLQNRRRMLAESLKDVESGGCGESV

AT3G15395.4 unknown protein2.9e-0565.71Show/hide
Query:  IGLYMVAQERQLQNRRRMLAESLKDVESGGCGESV
        IGLYMVA ERQ QNR R +AESL+  ES G G++V
Subjt:  IGLYMVAQERQLQNRRRMLAESLKDVESGGCGESV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACATCTACTTTACTTGTTTTTTGAATGTGGTGATGCTCGACGTTCTGTGTGCTGTAATTACTGACTACTTAGCTCAATATTTTCAGAAAGATATGGGAGGCAGAGG
AGTTATTGGTTTGTATATGGTTGCTCAAGAAAGACAATTACAGAACAGGCGAAGAATGTTGGCTGAGAGTCTGAAAGATGTGGAATCAGGAGGCTGTGGGGAAAGTGTTT
AG
mRNA sequenceShow/hide mRNA sequence
ATGTACATCTACTTTACTTGTTTTTTGAATGTGGTGATGCTCGACGTTCTGTGTGCTGTAATTACTGACTACTTAGCTCAATATTTTCAGAAAGATATGGGAGGCAGAGG
AGTTATTGGTTTGTATATGGTTGCTCAAGAAAGACAATTACAGAACAGGCGAAGAATGTTGGCTGAGAGTCTGAAAGATGTGGAATCAGGAGGCTGTGGGGAAAGTGTTT
AG
Protein sequenceShow/hide protein sequence
MYIYFTCFLNVVMLDVLCAVITDYLAQYFQKDMGGRGVIGLYMVAQERQLQNRRRMLAESLKDVESGGCGESV