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Carg00035 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg00035
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr04:4968069..4969003
RNA-Seq ExpressionCarg00035
SyntenyCarg00035
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577394.1 Chlorophyll a-b binding protein 3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.0e-1457.26Show/hide
Query:  MAKNRNKKKKGSGAISMDITEKFCSRAPSRSHCLTLAALLDLFGIALFLFAPPTMSDQYPLLDRKLKKGGRPMKRSKNVRKT----KAISKTEQSAEKIL
        MAKN+NKKK+ SGAISMDITE      P        A      G                 L+ KLKK GRPMKRSKNVRKT    KAISK EQSAEKIL
Subjt:  MAKNRNKKKKGSGAISMDITEKFCSRAPSRSHCLTLAALLDLFGIALFLFAPPTMSDQYPLLDRKLKKGGRPMKRSKNVRKT----KAISKTEQSAEKIL

Query:  KNQGETTRIHSAKTLYE
        KNQ +TTRIHSAKTLYE
Subjt:  KNQGETTRIHSAKTLYE

KAG7031381.1 hypothetical protein SDJN02_05421 [Cucurbita argyrosperma subsp. argyrosperma]1.0e-54100Show/hide
Query:  MAKNRNKKKKGSGAISMDITEKFCSRAPSRSHCLTLAALLDLFGIALFLFAPPTMSDQYPLLDRKLKKGGRPMKRSKNVRKTKAISKTEQSAEKILKNQG
        MAKNRNKKKKGSGAISMDITEKFCSRAPSRSHCLTLAALLDLFGIALFLFAPPTMSDQYPLLDRKLKKGGRPMKRSKNVRKTKAISKTEQSAEKILKNQG
Subjt:  MAKNRNKKKKGSGAISMDITEKFCSRAPSRSHCLTLAALLDLFGIALFLFAPPTMSDQYPLLDRKLKKGGRPMKRSKNVRKTKAISKTEQSAEKILKNQG

Query:  ETTRIHSAKTLYESYSL
        ETTRIHSAKTLYESYSL
Subjt:  ETTRIHSAKTLYESYSL

XP_008452291.1 PREDICTED: uncharacterized protein LOC103493362 [Cucumis melo]1.0e-1455.56Show/hide
Query:  MAKNRNKKKKGSGAISMDITEKFCSRAPSRSHCLTLAALLDLFGIALFLFAPPTMSDQYPLLDRKLKKGGRPMKRSKNVRKT----KAISKTEQSAEKIL
        MAKNRNKKK+G GA+SMD+TE      P                 A+ + A          LD KLKK GRPMKRSKNVRKT    KAISK+EQS EKIL
Subjt:  MAKNRNKKKKGSGAISMDITEKFCSRAPSRSHCLTLAALLDLFGIALFLFAPPTMSDQYPLLDRKLKKGGRPMKRSKNVRKT----KAISKTEQSAEKIL

Query:  KNQGETTRIHSAKTLYE
        KNQ +TTRI SAKTLYE
Subjt:  KNQGETTRIHSAKTLYE

XP_022929206.1 uncharacterized protein LOC111435867 [Cucurbita moschata]1.0e-1457.26Show/hide
Query:  MAKNRNKKKKGSGAISMDITEKFCSRAPSRSHCLTLAALLDLFGIALFLFAPPTMSDQYPLLDRKLKKGGRPMKRSKNVRKT----KAISKTEQSAEKIL
        MAKN+NKKK+ SGAISMDITE      P        A      G                 L+ KLKK GRPMKRSKNVRKT    KAISK EQSAEKIL
Subjt:  MAKNRNKKKKGSGAISMDITEKFCSRAPSRSHCLTLAALLDLFGIALFLFAPPTMSDQYPLLDRKLKKGGRPMKRSKNVRKT----KAISKTEQSAEKIL

Query:  KNQGETTRIHSAKTLYE
        KNQ +TTRIHSAKTLYE
Subjt:  KNQGETTRIHSAKTLYE

XP_023538255.1 uncharacterized protein LOC111799087 [Cucurbita pepo subsp. pepo]5.3e-1960.68Show/hide
Query:  MAKNRNKKKKGSGAISMDITEKFCSRAPSRSHCLTLAALLDLFGIALFLFAPPTMSDQYPLLDRKLKKGGRPMKRSKNVRKT----KAISKTEQSAEKIL
        MAKNRNKKKKGSGAISMDITE      P        A      G                 L+ KLKKGGR MKRSKNVRKT    KAISK+EQSAEKIL
Subjt:  MAKNRNKKKKGSGAISMDITEKFCSRAPSRSHCLTLAALLDLFGIALFLFAPPTMSDQYPLLDRKLKKGGRPMKRSKNVRKT----KAISKTEQSAEKIL

Query:  KNQGETTRIHSAKTLYE
        KNQG+TTRIHSAKTLYE
Subjt:  KNQGETTRIHSAKTLYE

TrEMBL top hitse value%identityAlignment
A0A1S2XDI5 uncharacterized protein LOC1015020612.8e-1047.01Show/hide
Query:  MAKNRNKKKKGSGAISMDITEKFCSRAPSRSHCLTLAALLDLFGIALFLFAPPTMSDQYPLLDRKLKKGGRPMKRSKNVRKTKAISK----TEQSAEKIL
        MAKNRNKK K +G +SMD T+ F S AP         A+     +A    A  T        + K+K+ GRPMKRSKNVRK KAI+K     E+S EKI 
Subjt:  MAKNRNKKKKGSGAISMDITEKFCSRAPSRSHCLTLAALLDLFGIALFLFAPPTMSDQYPLLDRKLKKGGRPMKRSKNVRKTKAISK----TEQSAEKIL

Query:  KNQGETTRIHSAKTLYE
        KN  + +R+ SAKTLYE
Subjt:  KNQGETTRIHSAKTLYE

A0A1S3BUB2 uncharacterized protein LOC1034933625.0e-1555.56Show/hide
Query:  MAKNRNKKKKGSGAISMDITEKFCSRAPSRSHCLTLAALLDLFGIALFLFAPPTMSDQYPLLDRKLKKGGRPMKRSKNVRKT----KAISKTEQSAEKIL
        MAKNRNKKK+G GA+SMD+TE      P                 A+ + A          LD KLKK GRPMKRSKNVRKT    KAISK+EQS EKIL
Subjt:  MAKNRNKKKKGSGAISMDITEKFCSRAPSRSHCLTLAALLDLFGIALFLFAPPTMSDQYPLLDRKLKKGGRPMKRSKNVRKT----KAISKTEQSAEKIL

Query:  KNQGETTRIHSAKTLYE
        KNQ +TTRI SAKTLYE
Subjt:  KNQGETTRIHSAKTLYE

A0A2Z6MMM9 Uncharacterized protein4.8e-1045.3Show/hide
Query:  MAKNRNKKKKGSGAISMDITEKFCSRAPSRSHCLTLAALLDLFGIALFLFAPPTMSDQYPLLDRKLKKGGRPMKRSKNVRK----TKAISKTEQSAEKIL
        MAKNRNKKKK +GA+SMD T+   S AP         A + + G                  + K+K+ GRPMKRSKNVRK     KAIS  E+SAEK+ 
Subjt:  MAKNRNKKKKGSGAISMDITEKFCSRAPSRSHCLTLAALLDLFGIALFLFAPPTMSDQYPLLDRKLKKGGRPMKRSKNVRK----TKAISKTEQSAEKIL

Query:  KNQGETTRIHSAKTLYE
        K+  + +R+ SAKTLYE
Subjt:  KNQGETTRIHSAKTLYE

A0A6J1EMH0 uncharacterized protein LOC1114358675.0e-1557.26Show/hide
Query:  MAKNRNKKKKGSGAISMDITEKFCSRAPSRSHCLTLAALLDLFGIALFLFAPPTMSDQYPLLDRKLKKGGRPMKRSKNVRKT----KAISKTEQSAEKIL
        MAKN+NKKK+ SGAISMDITE      P        A      G                 L+ KLKK GRPMKRSKNVRKT    KAISK EQSAEKIL
Subjt:  MAKNRNKKKKGSGAISMDITEKFCSRAPSRSHCLTLAALLDLFGIALFLFAPPTMSDQYPLLDRKLKKGGRPMKRSKNVRKT----KAISKTEQSAEKIL

Query:  KNQGETTRIHSAKTLYE
        KNQ +TTRIHSAKTLYE
Subjt:  KNQGETTRIHSAKTLYE

A0A6J1J4F8 uncharacterized protein LOC1114833162.5e-1456.41Show/hide
Query:  MAKNRNKKKKGSGAISMDITEKFCSRAPSRSHCLTLAALLDLFGIALFLFAPPTMSDQYPLLDRKLKKGGRPMKRSKNVRKT----KAISKTEQSAEKIL
        MAKN+NKK+  SGAISMDITE      P        A      G                 L+ KLKK GRPMKRSKNVRKT    KAISK EQSAEKIL
Subjt:  MAKNRNKKKKGSGAISMDITEKFCSRAPSRSHCLTLAALLDLFGIALFLFAPPTMSDQYPLLDRKLKKGGRPMKRSKNVRKT----KAISKTEQSAEKIL

Query:  KNQGETTRIHSAKTLYE
        KNQ +TTRIHSAKTLYE
Subjt:  KNQGETTRIHSAKTLYE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAAGAACAGGAATAAGAAGAAGAAGGGAAGTGGAGCTATTTCAATGGACATAACCGAAAAATTCTGTTCACGAGCTCCCTCAAGATCACATTGTCTAACGTTGGC
TGCTCTACTAGATTTGTTTGGTATTGCCCTTTTCCTATTTGCACCACCCACTATGTCTGATCAGTACCCTTTGTTGGATAGAAAGTTGAAGAAGGGGGGAAGACCAATGA
AGCGATCAAAGAATGTTAGGAAAACAAAAGCCATATCCAAGACCGAGCAATCCGCCGAGAAAATATTGAAAAATCAGGGGGAAACTACCAGGATACACTCTGCAAAAACA
TTGTATGAATCATACAGCCTTTAA
mRNA sequenceShow/hide mRNA sequence
CTCCTTTTAGCTTCTTGCTTCCCTCTGATCTTAGGGTTTTCATTGTCAATCTTCGCGGCTTTATTTATCGGCGATGGCGAAGAACAGGAATAAGAAGAAGAAGGGAAGTG
GAGCTATTTCAATGGACATAACCGAAAAATTCTGTTCACGAGCTCCCTCAAGATCACATTGTCTAACGTTGGCTGCTCTACTAGATTTGTTTGGTATTGCCCTTTTCCTA
TTTGCACCACCCACTATGTCTGATCAGTACCCTTTGTTGGATAGAAAGTTGAAGAAGGGGGGAAGACCAATGAAGCGATCAAAGAATGTTAGGAAAACAAAAGCCATATC
CAAGACCGAGCAATCCGCCGAGAAAATATTGAAAAATCAGGGGGAAACTACCAGGATACACTCTGCAAAAACATTGTATGAATCATACAGCCTTTAA
Protein sequenceShow/hide protein sequence
MAKNRNKKKKGSGAISMDITEKFCSRAPSRSHCLTLAALLDLFGIALFLFAPPTMSDQYPLLDRKLKKGGRPMKRSKNVRKTKAISKTEQSAEKILKNQGETTRIHSAKT
LYESYSL