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Carg00043 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg00043
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionProtein of unknown function, DUF538
Genome locationCarg_Chr04:4998039..4998681
RNA-Seq ExpressionCarg00043
SyntenyCarg00043
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR007493 - Protein of unknown function DUF538
IPR036758 - At5g01610-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600749.1 hypothetical protein SDJN03_05982, partial [Cucurbita argyrosperma subsp. sororia]1.1e-86100Show/hide
Query:  MASAFFFHNFTFFFYISLLSLSLRLPHSLSLSSTIHDLLRSQGLPAGLLPKEVKSYTLSQNGLLEVFLDGPCLTKYENRVLFESVVRANLSYGSLIGVQG
        MASAFFFHNFTFFFYISLLSLSLRLPHSLSLSSTIHDLLRSQGLPAGLLPKEVKSYTLSQNGLLEVFLDGPCLTKYENRVLFESVVRANLSYGSLIGVQG
Subjt:  MASAFFFHNFTFFFYISLLSLSLRLPHSLSLSSTIHDLLRSQGLPAGLLPKEVKSYTLSQNGLLEVFLDGPCLTKYENRVLFESVVRANLSYGSLIGVQG

Query:  LTQEELFLWLPVKDIIVDDPKSGLILFDIGVAHKQLALSLFEDPPSCKAQPKEALRNQVRKEKGFEALR
        LTQEELFLWLPVKDIIVDDPKSGLILFDIGVAHKQLALSLFEDPPSCKAQPKEALRNQVRKEKGFEALR
Subjt:  LTQEELFLWLPVKDIIVDDPKSGLILFDIGVAHKQLALSLFEDPPSCKAQPKEALRNQVRKEKGFEALR

XP_022942558.1 uncharacterized protein LOC111447556 [Cucurbita moschata]4.3e-8699.41Show/hide
Query:  MASAFFFHNFTFFFYISLLSLSLRLPHSLSLSSTIHDLLRSQGLPAGLLPKEVKSYTLSQNGLLEVFLDGPCLTKYENRVLFESVVRANLSYGSLIGVQG
        MASAFFFHNFTFFFYISLLSL LRLPHSLSLSSTIHDLLRSQGLPAGLLPKEVKSYTLSQNGLLEVFLDGPCLTKYENRVLFESVVRANLSYGSLIGVQG
Subjt:  MASAFFFHNFTFFFYISLLSLSLRLPHSLSLSSTIHDLLRSQGLPAGLLPKEVKSYTLSQNGLLEVFLDGPCLTKYENRVLFESVVRANLSYGSLIGVQG

Query:  LTQEELFLWLPVKDIIVDDPKSGLILFDIGVAHKQLALSLFEDPPSCKAQPKEALRNQVRKEKGFEALR
        LTQEELFLWLPVKDIIVDDPKSGLILFDIGVAHKQLALSLFEDPPSCKAQPKEALRNQVRKEKGFEALR
Subjt:  LTQEELFLWLPVKDIIVDDPKSGLILFDIGVAHKQLALSLFEDPPSCKAQPKEALRNQVRKEKGFEALR

XP_022992944.1 uncharacterized protein LOC111489122 [Cucurbita maxima]2.8e-8598.82Show/hide
Query:  MASAFFFHNFTFFFYISLLSLSLRLPHSLSLSSTIHDLLRSQGLPAGLLPKEVKSYTLSQNGLLEVFLDGPCLTKYENRVLFESVVRANLSYGSLIGVQG
        MASAFFFHNFT FFYISLL LSLRLPHSLSLSSTIHDLLRSQGLPAGLLPKEVKSYTLSQNGLLEVFLDGPCLTKYENRVLFESVVRANLSYGSLIGVQG
Subjt:  MASAFFFHNFTFFFYISLLSLSLRLPHSLSLSSTIHDLLRSQGLPAGLLPKEVKSYTLSQNGLLEVFLDGPCLTKYENRVLFESVVRANLSYGSLIGVQG

Query:  LTQEELFLWLPVKDIIVDDPKSGLILFDIGVAHKQLALSLFEDPPSCKAQPKEALRNQVRKEKGFEALR
        LTQEELFLWLPVKDIIVDDPKSGLILFDIGVAHKQLALSLFEDPPSCKAQPKEALRNQVRKEKGFEALR
Subjt:  LTQEELFLWLPVKDIIVDDPKSGLILFDIGVAHKQLALSLFEDPPSCKAQPKEALRNQVRKEKGFEALR

XP_023546381.1 uncharacterized protein LOC111805505 [Cucurbita pepo subsp. pepo]1.7e-7999.37Show/hide
Query:  FFFYISLLSLSLRLPHSLSLSSTIHDLLRSQGLPAGLLPKEVKSYTLSQNGLLEVFLDGPCLTKYENRVLFESVVRANLSYGSLIGVQGLTQEELFLWLP
        FFFYISLLSLSL LPHSLSLSSTIHDLLRSQGLPAGLLPKEVKSYTLSQNGLLEVFLDGPCLTKYENRVLFESVVRANLSYGSLIGVQGLTQEELFLWLP
Subjt:  FFFYISLLSLSLRLPHSLSLSSTIHDLLRSQGLPAGLLPKEVKSYTLSQNGLLEVFLDGPCLTKYENRVLFESVVRANLSYGSLIGVQGLTQEELFLWLP

Query:  VKDIIVDDPKSGLILFDIGVAHKQLALSLFEDPPSCKAQPKEALRNQVRKEKGFEALR
        VKDIIVDDPKSGLILFDIGVAHKQLALSLFEDPPSCKAQPKEALRNQVRKEKGFEALR
Subjt:  VKDIIVDDPKSGLILFDIGVAHKQLALSLFEDPPSCKAQPKEALRNQVRKEKGFEALR

XP_038905336.1 uncharacterized protein LOC120091403 [Benincasa hispida]3.5e-7289.16Show/hide
Query:  AFFFHNFTFFFYISLLSLSLRLPHSLSLSSTIHDLLRSQGLPAGLLPKEVKSYTLSQNGLLEVFLDGPCLTKYENRVLFESVVRANLSYGSLIGVQGLTQ
        A FFH FT FF ISL  +SL LP SLSLSSTIHDLLRS+GLP GLLPKEVKSY+LS NGLLEVFLDGPCLTKYENRVLF+SVVRANLSYGSLIGVQGLTQ
Subjt:  AFFFHNFTFFFYISLLSLSLRLPHSLSLSSTIHDLLRSQGLPAGLLPKEVKSYTLSQNGLLEVFLDGPCLTKYENRVLFESVVRANLSYGSLIGVQGLTQ

Query:  EELFLWLPVKDIIVDDPKSGLILFDIGVAHKQLALSLFEDPPSCKAQPKEALRNQVRKEKGFEALR
        EELFLWLPVKDIIVDDPKSGLILFDIGVAHKQLALSLFEDPPSCK+QPK  LRN VRKEKGFEALR
Subjt:  EELFLWLPVKDIIVDDPKSGLILFDIGVAHKQLALSLFEDPPSCKAQPKEALRNQVRKEKGFEALR

TrEMBL top hitse value%identityAlignment
A0A0A0L572 Uncharacterized protein2.1e-6785.89Show/hide
Query:  HNFTFFFYISLLSLSLRLPHSLSLSS-TIHDLLRSQGLPAGLLPKEVKSYTLSQNGLLEVFLDGPCLTKYENRVLFESVVRANLSYGSLIGVQGLTQEEL
        H   F FYISL+SLS  LP SLSLSS TIHDLLRS+GLP GLLPKEVKSY+LS NGLL+VFLDGPCLTKYENRV+FESVV ANLSYGSLIGVQGLTQEEL
Subjt:  HNFTFFFYISLLSLSLRLPHSLSLSS-TIHDLLRSQGLPAGLLPKEVKSYTLSQNGLLEVFLDGPCLTKYENRVLFESVVRANLSYGSLIGVQGLTQEEL

Query:  FLWLPVKDIIVDDPKSGLILFDIGVAHKQLALSLFEDPPSCKAQPKEALRNQVRKEKGFEALR
        FLWLPVKDIIVDDPKSGLILFDIGVAHKQLALSLFEDPPSCK+Q K  LRN VRKEKGFE  R
Subjt:  FLWLPVKDIIVDDPKSGLILFDIGVAHKQLALSLFEDPPSCKAQPKEALRNQVRKEKGFEALR

A0A1S3BUE7 uncharacterized protein LOC1034933979.6e-6885.89Show/hide
Query:  HNFTFFFYISLLSLSLRLPHSLSLSS-TIHDLLRSQGLPAGLLPKEVKSYTLSQNGLLEVFLDGPCLTKYENRVLFESVVRANLSYGSLIGVQGLTQEEL
        H   F FYISL+SLS  LP SLSLSS TIHDLLRS+GLP GLLPKEVKSY+LS NGLL+VFLDGPCLTKYENRV+FESVV ANLSYGSLIGVQGLTQEEL
Subjt:  HNFTFFFYISLLSLSLRLPHSLSLSS-TIHDLLRSQGLPAGLLPKEVKSYTLSQNGLLEVFLDGPCLTKYENRVLFESVVRANLSYGSLIGVQGLTQEEL

Query:  FLWLPVKDIIVDDPKSGLILFDIGVAHKQLALSLFEDPPSCKAQPKEALRNQVRKEKGFEALR
        FLWLPVKDIIVDDP SGLILFDIGVAHKQLALSLFEDPPSCK+QPK  LRN VRKEKGFE  R
Subjt:  FLWLPVKDIIVDDPKSGLILFDIGVAHKQLALSLFEDPPSCKAQPKEALRNQVRKEKGFEALR

A0A5A7VEX6 Uncharacterized protein9.6e-6885.89Show/hide
Query:  HNFTFFFYISLLSLSLRLPHSLSLSS-TIHDLLRSQGLPAGLLPKEVKSYTLSQNGLLEVFLDGPCLTKYENRVLFESVVRANLSYGSLIGVQGLTQEEL
        H   F FYISL+SLS  LP SLSLSS TIHDLLRS+GLP GLLPKEVKSY+LS NGLL+VFLDGPCLTKYENRV+FESVV ANLSYGSLIGVQGLTQEEL
Subjt:  HNFTFFFYISLLSLSLRLPHSLSLSS-TIHDLLRSQGLPAGLLPKEVKSYTLSQNGLLEVFLDGPCLTKYENRVLFESVVRANLSYGSLIGVQGLTQEEL

Query:  FLWLPVKDIIVDDPKSGLILFDIGVAHKQLALSLFEDPPSCKAQPKEALRNQVRKEKGFEALR
        FLWLPVKDIIVDDP SGLILFDIGVAHKQLALSLFEDPPSCK+QPK  LRN VRKEKGFE  R
Subjt:  FLWLPVKDIIVDDPKSGLILFDIGVAHKQLALSLFEDPPSCKAQPKEALRNQVRKEKGFEALR

A0A6J1FV48 uncharacterized protein LOC1114475562.1e-8699.41Show/hide
Query:  MASAFFFHNFTFFFYISLLSLSLRLPHSLSLSSTIHDLLRSQGLPAGLLPKEVKSYTLSQNGLLEVFLDGPCLTKYENRVLFESVVRANLSYGSLIGVQG
        MASAFFFHNFTFFFYISLLSL LRLPHSLSLSSTIHDLLRSQGLPAGLLPKEVKSYTLSQNGLLEVFLDGPCLTKYENRVLFESVVRANLSYGSLIGVQG
Subjt:  MASAFFFHNFTFFFYISLLSLSLRLPHSLSLSSTIHDLLRSQGLPAGLLPKEVKSYTLSQNGLLEVFLDGPCLTKYENRVLFESVVRANLSYGSLIGVQG

Query:  LTQEELFLWLPVKDIIVDDPKSGLILFDIGVAHKQLALSLFEDPPSCKAQPKEALRNQVRKEKGFEALR
        LTQEELFLWLPVKDIIVDDPKSGLILFDIGVAHKQLALSLFEDPPSCKAQPKEALRNQVRKEKGFEALR
Subjt:  LTQEELFLWLPVKDIIVDDPKSGLILFDIGVAHKQLALSLFEDPPSCKAQPKEALRNQVRKEKGFEALR

A0A6J1JYV3 uncharacterized protein LOC1114891221.3e-8598.82Show/hide
Query:  MASAFFFHNFTFFFYISLLSLSLRLPHSLSLSSTIHDLLRSQGLPAGLLPKEVKSYTLSQNGLLEVFLDGPCLTKYENRVLFESVVRANLSYGSLIGVQG
        MASAFFFHNFT FFYISLL LSLRLPHSLSLSSTIHDLLRSQGLPAGLLPKEVKSYTLSQNGLLEVFLDGPCLTKYENRVLFESVVRANLSYGSLIGVQG
Subjt:  MASAFFFHNFTFFFYISLLSLSLRLPHSLSLSSTIHDLLRSQGLPAGLLPKEVKSYTLSQNGLLEVFLDGPCLTKYENRVLFESVVRANLSYGSLIGVQG

Query:  LTQEELFLWLPVKDIIVDDPKSGLILFDIGVAHKQLALSLFEDPPSCKAQPKEALRNQVRKEKGFEALR
        LTQEELFLWLPVKDIIVDDPKSGLILFDIGVAHKQLALSLFEDPPSCKAQPKEALRNQVRKEKGFEALR
Subjt:  LTQEELFLWLPVKDIIVDDPKSGLILFDIGVAHKQLALSLFEDPPSCKAQPKEALRNQVRKEKGFEALR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G61667.1 Protein of unknown function, DUF5381.9e-3956.08Show/hide
Query:  LLSLSLRLPH-SLSLSSTIHDLLRSQGLPAGLLPKEVKSYTL-SQNGLLEVFLDGPCLTKYENRVLFESVVRANLSYGSLIGVQGLTQEELFLWLPVKDI
        LL L L +P  + S  S+I +LL ++GLP GL P  V+SY+L  + G LEV L  PC  ++ENRV F+ V++ANLSYG L+G++GLTQEELFLWLPVK I
Subjt:  LLSLSLRLPH-SLSLSSTIHDLLRSQGLPAGLLPKEVKSYTL-SQNGLLEVFLDGPCLTKYENRVLFESVVRANLSYGSLIGVQGLTQEELFLWLPVKDI

Query:  IVDDPKSGLILFDIGVAHKQLALSLFEDPPSCKAQPKEALRNQVRKEK
         V+DP SGL+LFDIGVAHKQ++ SLFEDPP C   P  ++  ++ K K
Subjt:  IVDDPKSGLILFDIGVAHKQLALSLFEDPPSCKAQPKEALRNQVRKEK

AT3G07460.1 Protein of unknown function, DUF5382.2e-2439.85Show/hide
Query:  LLSLSLRLPHSLSLSSTIHDLLRSQGLPAGLLPKEVKSYTLS-QNGLLEVFLDGPCLTKYENRVLFESVVRANLSYGSLIGVQGLTQEELFLWLPVKDII
        +L+  + +   ++ + +I ++L + GLP GL PK VK +T++ + G   V+L+  C  KYE  + ++ +V   + Y  +  + G++ +ELFLWL VK I 
Subjt:  LLSLSLRLPHSLSLSSTIHDLLRSQGLPAGLLPKEVKSYTLS-QNGLLEVFLDGPCLTKYENRVLFESVVRANLSYGSLIGVQGLTQEELFLWLPVKDII

Query:  VDDPKSGLILFDIGVAHKQLALSLFEDPPSCKA
        VD P SGLI FD+GV  KQ +LSLFE P  C A
Subjt:  VDDPKSGLILFDIGVAHKQLALSLFEDPPSCKA

AT3G07460.2 Protein of unknown function, DUF5382.2e-2439.85Show/hide
Query:  LLSLSLRLPHSLSLSSTIHDLLRSQGLPAGLLPKEVKSYTLS-QNGLLEVFLDGPCLTKYENRVLFESVVRANLSYGSLIGVQGLTQEELFLWLPVKDII
        +L+  + +   ++ + +I ++L + GLP GL PK VK +T++ + G   V+L+  C  KYE  + ++ +V   + Y  +  + G++ +ELFLWL VK I 
Subjt:  LLSLSLRLPHSLSLSSTIHDLLRSQGLPAGLLPKEVKSYTLS-QNGLLEVFLDGPCLTKYENRVLFESVVRANLSYGSLIGVQGLTQEELFLWLPVKDII

Query:  VDDPKSGLILFDIGVAHKQLALSLFEDPPSCKA
        VD P SGLI FD+GV  KQ +LSLFE P  C A
Subjt:  VDDPKSGLILFDIGVAHKQLALSLFEDPPSCKA

AT5G16380.1 Protein of unknown function, DUF5383.8e-2445.32Show/hide
Query:  FFYISLLSLSLRLPHSLSL-SSTIHDLLRSQGLPAGLLPKEVKSYTLS-QNGLLEVFLDGPCLTKYENRVLFESVVRANLSYGSLIGVQGLTQEELFLWL
        FF I +L  S+  P   SL   + +D LR   LPAG++PK V ++++  + G   V L  PC  K+EN+  F+  +   LS G +  + G+TQ+ELFLW 
Subjt:  FFYISLLSLSLRLPHSLSL-SSTIHDLLRSQGLPAGLLPKEVKSYTLS-QNGLLEVFLDGPCLTKYENRVLFESVVRANLSYGSLIGVQGLTQEELFLWL

Query:  PVKDIIVDDPKSGLILFDIGVAHKQLALSLFEDPPSCKA
         VK I VD   SGLI FD+GVA KQL+LSLFE P  C A
Subjt:  PVKDIIVDDPKSGLILFDIGVAHKQLALSLFEDPPSCKA

AT5G54530.1 Protein of unknown function, DUF5381.7e-4863.82Show/hide
Query:  LLSLSLRLPHSLSLSS--TIHDLLRSQGLPAGLLPKEVKSYTLSQNGLLEVFLDGPCLTKYENRVLFESVVRANLSYGSLIGVQGLTQEELFLWLPVKDI
        LL  +LRL  SLS  S  T+HD+LRS+GLPAGLLP+EV SY L  +G LEVFL  PC  K+E  V FE+VVR NLSYGSL+GV+GL+Q+ELFLWL VKDI
Subjt:  LLSLSLRLPHSLSLSS--TIHDLLRSQGLPAGLLPKEVKSYTLSQNGLLEVFLDGPCLTKYENRVLFESVVRANLSYGSLIGVQGLTQEELFLWLPVKDI

Query:  IVDDPKSGLILFDIGVAHKQLALSLFEDPPSCKAQPKEALRNQVRKEKGFEA
        +V++P SG+I+FDIGVA KQL+LSLFEDPP CK  P   L+ ++R+++GFEA
Subjt:  IVDDPKSGLILFDIGVAHKQLALSLFEDPPSCKAQPKEALRNQVRKEKGFEA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTCCGCCTTCTTCTTCCATAATTTCACCTTCTTCTTCTACATTTCCCTCCTCTCTCTCTCTCTCCGTCTTCCCCATTCCCTGTCTCTCTCCTCCACCATCCACGA
CCTCCTCCGCTCCCAAGGGCTGCCGGCCGGCCTTCTTCCGAAGGAGGTCAAGTCGTACACCCTGTCTCAAAATGGGTTGTTGGAAGTGTTCCTGGATGGGCCTTGTTTAA
CCAAATATGAGAACAGGGTTCTATTTGAGAGTGTTGTTAGGGCTAATCTCAGCTATGGCAGTCTGATTGGCGTACAGGGTCTCACTCAAGAGGAGCTCTTTTTATGGCTC
CCTGTTAAGGATATCATCGTGGATGACCCTAAATCTGGGCTTATTCTCTTTGATATTGGTGTCGCTCACAAACAACTTGCTCTCTCTCTCTTCGAAGATCCCCCCAGTTG
CAAGGCTCAACCCAAAGAGGCGTTGAGGAATCAGGTGAGGAAGGAGAAAGGATTTGAAGCTCTAAGATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCTCCGCCTTCTTCTTCCATAATTTCACCTTCTTCTTCTACATTTCCCTCCTCTCTCTCTCTCTCCGTCTTCCCCATTCCCTGTCTCTCTCCTCCACCATCCACGA
CCTCCTCCGCTCCCAAGGGCTGCCGGCCGGCCTTCTTCCGAAGGAGGTCAAGTCGTACACCCTGTCTCAAAATGGGTTGTTGGAAGTGTTCCTGGATGGGCCTTGTTTAA
CCAAATATGAGAACAGGGTTCTATTTGAGAGTGTTGTTAGGGCTAATCTCAGCTATGGCAGTCTGATTGGCGTACAGGGTCTCACTCAAGAGGAGCTCTTTTTATGGCTC
CCTGTTAAGGATATCATCGTGGATGACCCTAAATCTGGGCTTATTCTCTTTGATATTGGTGTCGCTCACAAACAACTTGCTCTCTCTCTCTTCGAAGATCCCCCCAGTTG
CAAGGCTCAACCCAAAGAGGCGTTGAGGAATCAGGTGAGGAAGGAGAAAGGATTTGAAGCTCTAAGATAG
Protein sequenceShow/hide protein sequence
MASAFFFHNFTFFFYISLLSLSLRLPHSLSLSSTIHDLLRSQGLPAGLLPKEVKSYTLSQNGLLEVFLDGPCLTKYENRVLFESVVRANLSYGSLIGVQGLTQEELFLWL
PVKDIIVDDPKSGLILFDIGVAHKQLALSLFEDPPSCKAQPKEALRNQVRKEKGFEALR