CuGenDBv2

Gene ID	Carg00071
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12
Genome location	Carg_Chr04:5136135..5140007
RNA-Seq Expression	Carg00071
Synteny	Carg00071
Gene Ontology terms	GO:0032981 - mitochondrial respiratory chain complex I assembly (biological process) GO:0005743 - mitochondrial inner membrane (cellular component) GO:0070469 - respirasome (cellular component)
InterPro domains	IPR007763 - NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG7031417.1 hypothetical protein SDJN02_05457 [Cucurbita argyrosperma subsp. argyrosperma]

2.6e-100

100

Show/hide

Query:  MSVQTVLGGKIMSKLLKKLAGFFTDRTLMGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQN
        MSVQTVLGGKIMSKLLKKLAGFFTDRTLMGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQN
Subjt:  MSVQTVLGGKIMSKLLKKLAGFFTDRTLMGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQN

Query:  VALLKKEEMERKSKESNLRKVVSTVAGPNLKSFIRQFPTGSEGAQDNEGSAAKDSLRNSKENEAAKEQPIPESSEPMGSGQTFRPGTWQPPT
        VALLKKEEMERKSKESNLRKVVSTVAGPNLKSFIRQFPTGSEGAQDNEGSAAKDSLRNSKENEAAKEQPIPESSEPMGSGQTFRPGTWQPPT
Subjt:  VALLKKEEMERKSKESNLRKVVSTVAGPNLKSFIRQFPTGSEGAQDNEGSAAKDSLRNSKENEAAKEQPIPESSEPMGSGQTFRPGTWQPPT

XP_022942431.1 uncharacterized protein LOC111447475 isoform X1 [Cucurbita moschata]

4.5e-100

99.48

Show/hide

Query:  MSVQTVLGGKIMSKLLKKLAGFFTDRTLMGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQN
        MSVQTVLGGKIMSKLLKK+AGFFTDRTLMGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQN
Subjt:  MSVQTVLGGKIMSKLLKKLAGFFTDRTLMGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQN

Query:  VALLKKEEMERKSKESNLRKVVSTVAGPNLKSFIRQFPTGSEGAQDNEGSAAKDSLRNSKENEAAKEQPIPESSEPMGSGQTFRPGTWQPPT
        VALLKKEEMERKSKESNLRKVVSTVAGPNLKSFIRQFPTGSEGAQDNEGSAAKDSLRNSKENEAAKEQPIPESSEPMGSGQTFRPGTWQPPT
Subjt:  VALLKKEEMERKSKESNLRKVVSTVAGPNLKSFIRQFPTGSEGAQDNEGSAAKDSLRNSKENEAAKEQPIPESSEPMGSGQTFRPGTWQPPT

XP_022942432.1 uncharacterized protein LOC111447475 isoform X2 [Cucurbita moschata]

1.2e-97

98.44

Show/hide

Query:  MSVQTVLGGKIMSKLLKKLAGFFTDRTLMGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQN
        MSVQTVLGGKIMSKLLKK+AGFFTDRTLMGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQN
Subjt:  MSVQTVLGGKIMSKLLKKLAGFFTDRTLMGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQN

Query:  VALLKKEEMERKSKESNLRKVVSTVAGPNLKSFIRQFPTGSEGAQDNEGSAAKDSLRNSKENEAAKEQPIPESSEPMGSGQTFRPGTWQPPT
        VALLKKEEMERKSKESNLRKVVST  GPNLKSFIRQFPTGSEGAQDNEGSAAKDSLRNSKENEAAKEQPIPESSEPMGSGQTFRPGTWQPPT
Subjt:  VALLKKEEMERKSKESNLRKVVSTVAGPNLKSFIRQFPTGSEGAQDNEGSAAKDSLRNSKENEAAKEQPIPESSEPMGSGQTFRPGTWQPPT

XP_023545840.1 uncharacterized protein LOC111805151 isoform X1 [Cucurbita pepo subsp. pepo]

1.7e-99

98.96

Show/hide

Query:  MSVQTVLGGKIMSKLLKKLAGFFTDRTLMGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQN
        MSVQTVLGGKIMSKLLKK+AGFFTDRTLMGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRE VRQN
Subjt:  MSVQTVLGGKIMSKLLKKLAGFFTDRTLMGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQN

Query:  VALLKKEEMERKSKESNLRKVVSTVAGPNLKSFIRQFPTGSEGAQDNEGSAAKDSLRNSKENEAAKEQPIPESSEPMGSGQTFRPGTWQPPT
        VALLKKEEMERKSKESNLRKVVSTVAGPNLKSFIRQFPTGSEGAQDNEGSAAKDSLRNSKENEAAKEQPIPESSEPMGSGQTFRPGTWQPPT
Subjt:  VALLKKEEMERKSKESNLRKVVSTVAGPNLKSFIRQFPTGSEGAQDNEGSAAKDSLRNSKENEAAKEQPIPESSEPMGSGQTFRPGTWQPPT

XP_023545847.1 uncharacterized protein LOC111805151 isoform X2 [Cucurbita pepo subsp. pepo]

4.7e-97

97.92

Show/hide

Query:  MSVQTVLGGKIMSKLLKKLAGFFTDRTLMGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQN
        MSVQTVLGGKIMSKLLKK+AGFFTDRTLMGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRE VRQN
Subjt:  MSVQTVLGGKIMSKLLKKLAGFFTDRTLMGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQN

Query:  VALLKKEEMERKSKESNLRKVVSTVAGPNLKSFIRQFPTGSEGAQDNEGSAAKDSLRNSKENEAAKEQPIPESSEPMGSGQTFRPGTWQPPT
        VALLKKEEMERKSKESNLRKVVST  GPNLKSFIRQFPTGSEGAQDNEGSAAKDSLRNSKENEAAKEQPIPESSEPMGSGQTFRPGTWQPPT
Subjt:  VALLKKEEMERKSKESNLRKVVSTVAGPNLKSFIRQFPTGSEGAQDNEGSAAKDSLRNSKENEAAKEQPIPESSEPMGSGQTFRPGTWQPPT

TrEMBL top hits

e value

%identity

Alignment

A0A6J1DNE9 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12

1.8e-78

83.06

Show/hide

Query:  MSKLLKKLAGFFTDRTLMGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMER
        MSKL  K+A FF+ RT+ GVDK+GN+YFF KEEIDG+MKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNV LLKK+EMER
Subjt:  MSKLLKKLAGFFTDRTLMGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMER

Query:  KSKESNLRKVVST--VAGPNLKSFIRQFPTGSEGAQDNEGSAAKDSLRNSKENEAAKEQPIPESSEPMGSGQTFRPGTWQPPT
         S+E NLRKV+S   VAGP+L SFIRQFPTGSEGAQD EGSAA++S RNSKE EA KE+PIPESSEP+GSGQTFRPGTWQPPT
Subjt:  KSKESNLRKVVST--VAGPNLKSFIRQFPTGSEGAQDNEGSAAKDSLRNSKENEAAKEQPIPESSEPMGSGQTFRPGTWQPPT

A0A6J1FNU8 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12

2.2e-100

99.48

Show/hide

Query:  MSVQTVLGGKIMSKLLKKLAGFFTDRTLMGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQN
        MSVQTVLGGKIMSKLLKK+AGFFTDRTLMGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQN
Subjt:  MSVQTVLGGKIMSKLLKKLAGFFTDRTLMGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQN

Query:  VALLKKEEMERKSKESNLRKVVSTVAGPNLKSFIRQFPTGSEGAQDNEGSAAKDSLRNSKENEAAKEQPIPESSEPMGSGQTFRPGTWQPPT
        VALLKKEEMERKSKESNLRKVVSTVAGPNLKSFIRQFPTGSEGAQDNEGSAAKDSLRNSKENEAAKEQPIPESSEPMGSGQTFRPGTWQPPT
Subjt:  VALLKKEEMERKSKESNLRKVVSTVAGPNLKSFIRQFPTGSEGAQDNEGSAAKDSLRNSKENEAAKEQPIPESSEPMGSGQTFRPGTWQPPT

A0A6J1FQ79 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12

5.9e-98

98.44

Show/hide

Query:  MSVQTVLGGKIMSKLLKKLAGFFTDRTLMGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQN
        MSVQTVLGGKIMSKLLKK+AGFFTDRTLMGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQN
Subjt:  MSVQTVLGGKIMSKLLKKLAGFFTDRTLMGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQN

Query:  VALLKKEEMERKSKESNLRKVVSTVAGPNLKSFIRQFPTGSEGAQDNEGSAAKDSLRNSKENEAAKEQPIPESSEPMGSGQTFRPGTWQPPT
        VALLKKEEMERKSKESNLRKVVST  GPNLKSFIRQFPTGSEGAQDNEGSAAKDSLRNSKENEAAKEQPIPESSEPMGSGQTFRPGTWQPPT
Subjt:  VALLKKEEMERKSKESNLRKVVSTVAGPNLKSFIRQFPTGSEGAQDNEGSAAKDSLRNSKENEAAKEQPIPESSEPMGSGQTFRPGTWQPPT

A0A6J1JSL7 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12

1.6e-90

96.69

Show/hide

Query:  MSKLLKKLAGFFTDRTLMGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMER
        MSKL KK+AGFFTDRTLMGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMER
Subjt:  MSKLLKKLAGFFTDRTLMGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMER

Query:  KSKESNLRKVVSTVAGPNLKSFIRQFPTGSEGAQDNEGSAAKDSLRNSKENEAAKEQPIPESSEPMGSGQTFRPGTWQPPT
        KSKESNLRKVVST  GPNLKSFIRQFPTGSEGAQDNEGSAAKDSLRNS+ENEAAKE+PIPESSEPMGSGQTFRPGTWQPPT
Subjt:  KSKESNLRKVVSTVAGPNLKSFIRQFPTGSEGAQDNEGSAAKDSLRNSKENEAAKEQPIPESSEPMGSGQTFRPGTWQPPT

A0A6J1JVV8 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12

5.7e-93

97.79

Show/hide

Query:  MSKLLKKLAGFFTDRTLMGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMER
        MSKL KK+AGFFTDRTLMGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMER
Subjt:  MSKLLKKLAGFFTDRTLMGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMER

Query:  KSKESNLRKVVSTVAGPNLKSFIRQFPTGSEGAQDNEGSAAKDSLRNSKENEAAKEQPIPESSEPMGSGQTFRPGTWQPPT
        KSKESNLRKVVSTVAGPNLKSFIRQFPTGSEGAQDNEGSAAKDSLRNS+ENEAAKE+PIPESSEPMGSGQTFRPGTWQPPT
Subjt:  KSKESNLRKVVSTVAGPNLKSFIRQFPTGSEGAQDNEGSAAKDSLRNSKENEAAKEQPIPESSEPMGSGQTFRPGTWQPPT

SwissProt top hits

e value

%identity

Alignment

Q54MV7 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12

1.7e-04

42.37

Show/hide

Query:  TLMGVDKAGNRYFFVKEEIDGIMKEKRWVVFKG--EDDPTSIPVEWICWLNGQRKKAPT
        TL+GVDK GNRY+  ++EI G     RWV +     +DPT+IP E+  W++    K P+
Subjt:  TLMGVDKAGNRYFFVKEEIDGIMKEKRWVVFKG--EDDPTSIPVEWICWLNGQRKKAPT

Arabidopsis top hits

e value

%identity

Alignment

AT4G26965.1 NADH:ubiquinone oxidoreductase, 17.2kDa subunit

4.7e-55

59.46

Show/hide

Query:  MSKLLKKLAGFFTDRTLMGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMER
        MS+L  + AG F+ ++ +GVDK GN+YF   EEIDG +KEKRWV F+ E+DPTSIPVEWICWLNGQRK+APTPEEM+ELEARRERV+ NVALLKKEE E+
Subjt:  MSKLLKKLAGFFTDRTLMGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMER

Query:  KSKESNLRKV-VSTVAGPNLKSFIRQFPTGSEGAQDNEGSAAKDSLRNSKENE---AAKEQPIPESSEPMGSGQTFRPGTWQPPT
        K++    RK+ +  V GP+L SF+RQFP  S+G +  E S   D  R +KE+E    + E P P+++EP GSG +FRPGTWQPP+
Subjt:  KSKESNLRKV-VSTVAGPNLKSFIRQFPTGSEGAQDNEGSAAKDSLRNSKENE---AAKEQPIPESSEPMGSGQTFRPGTWQPPT

AT4G26965.2 NADH:ubiquinone oxidoreductase, 17.2kDa subunit

1.4e-43

62.16

Show/hide

Query:  MKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMERKSKESNLRKV-VSTVAGPNLKSFIRQFPTGSEGAQDN
        MKEKRWV F+ E+DPTSIPVEWICWLNGQRK+APTPEEM+ELEARRERV+ NVALLKKEE E+K++    RK+ +  V GP+L SF+RQFP  S+G +  
Subjt:  MKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMERKSKESNLRKV-VSTVAGPNLKSFIRQFPTGSEGAQDN

Query:  EGSAAKDSLRNSKENE---AAKEQPIPESSEPMGSGQTFRPGTWQPPT
        E S   D  R +KE+E    + E P P+++EP GSG +FRPGTWQPP+
Subjt:  EGSAAKDSLRNSKENE---AAKEQPIPESSEPMGSGQTFRPGTWQPPT

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTCCGTGCAAACGGTGCTAGGAGGAAAGATAATGTCGAAGCTTTTGAAGAAACTTGCCGGCTTCTTCACCGATAGAACTCTGATGGGAGTTGACAAGGCGGGAAACAG
ATACTTCTTTGTAAAAGAAGAAATTGATGGCATAATGAAAGAGAAGAGATGGGTGGTTTTTAAGGGTGAGGATGATCCAACGTCAATTCCAGTGGAATGGATATGTTGGT
TAAATGGGCAGCGTAAAAAGGCTCCAACTCCAGAGGAAATGATGGAGTTAGAAGCTAGGCGTGAACGTGTACGACAAAATGTTGCCTTACTCAAGAAAGAAGAGATGGAA
AGAAAATCTAAAGAAAGCAATCTACGGAAAGTTGTTAGCACTGTTGCAGGTCCTAACTTGAAAAGCTTTATTCGACAATTTCCAACTGGTTCAGAAGGTGCTCAAGACAA
CGAAGGATCGGCTGCAAAGGATAGCCTGAGGAACTCAAAAGAAAATGAGGCAGCTAAAGAGCAACCAATTCCAGAGTCCTCCGAGCCCATGGGATCTGGTCAAACATTCA
GACCAGGAACGTGGCAGCCTCCAACATGA

mRNA sequence

Show/hide mRNA sequence

AAACTTCTGACGGAGAGCATAATCTTTGTCGACGTAGAAGAGGATAAATTATGGGCGTTCTGTAATGTCCGTGCAAACGGTGCTAGGAGGAAAGATAATGTCGAAGCTTT
TGAAGAAACTTGCCGGCTTCTTCACCGATAGAACTCTGATGGGAGTTGACAAGGCGGGAAACAGATACTTCTTTGTAAAAGAAGAAATTGATGGCATAATGAAAGAGAAG
AGATGGGTGGTTTTTAAGGGTGAGGATGATCCAACGTCAATTCCAGTGGAATGGATATGTTGGTTAAATGGGCAGCGTAAAAAGGCTCCAACTCCAGAGGAAATGATGGA
GTTAGAAGCTAGGCGTGAACGTGTACGACAAAATGTTGCCTTACTCAAGAAAGAAGAGATGGAAAGAAAATCTAAAGAAAGCAATCTACGGAAAGTTGTTAGCACTGTTG
CAGGTCCTAACTTGAAAAGCTTTATTCGACAATTTCCAACTGGTTCAGAAGGTGCTCAAGACAACGAAGGATCGGCTGCAAAGGATAGCCTGAGGAACTCAAAAGAAAAT
GAGGCAGCTAAAGAGCAACCAATTCCAGAGTCCTCCGAGCCCATGGGATCTGGTCAAACATTCAGACCAGGAACGTGGCAGCCTCCAACATGAGTGCTGATGCTCTTCAA
CTTCAAGAGAAGAACTCTCCAAACCCTTGAACTAGCAGTACAAGACTTCTGTATCAGCAATTTTGTATGCTTCCGTTTACTCAACATTCAACTTTTTCCGAGGGACGCCC
TTGTATTTGACTCTTACACATCCTGCCCTCCATTGTTCTAAACACAAGGTTGTCACTCTGCGTCGCCTTGGTTTCAAATGCTCATACAGTATTTGGTGAAAGCAGGATAA
CTATAGTTTTTTAAATGAATATCCCTAAAGAATACGTGTCGGTAGCTGCATTGCTGTAGACGAGTCATTATGGGATAAATATCTCAATATTGATTTAACCCATTTGAATC
TCATTTAAATTTTACATATGTTTTTATTTTAATATTTAAGTTATCAAATACAATATATATTCCTTTCTTTGAATACTTACAAGTAAATTTATCTGAACTCTAGTGAACTT
GTA

Protein sequence

Show/hide protein sequence

MSVQTVLGGKIMSKLLKKLAGFFTDRTLMGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEME
RKSKESNLRKVVSTVAGPNLKSFIRQFPTGSEGAQDNEGSAAKDSLRNSKENEAAKEQPIPESSEPMGSGQTFRPGTWQPPT

Carg00071 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome