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Carg00075 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg00075
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionDUF4228 domain protein
Genome locationCarg_Chr04:5156640..5156963
RNA-Seq ExpressionCarg00075
SyntenyCarg00075
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577418.1 hypothetical protein SDJN03_24992, partial [Cucurbita argyrosperma subsp. sororia]4.9e-1148.57Show/hide
Query:  MGNCVSNKIFCGKSSRISDEEALEMVKRSLMAYDEAPVASVTATTTELKIKITKRELEMLLANYNVVEVKEELQTEQLLSPLFYVDGTLEMQPRSWQPSL
        MGNC SNK          +EE +E VKR L A D+      T TTTE+KI++TKRELE LL+    VEV+E   TE LL  +   D +     RSW+PSL
Subjt:  MGNCVSNKIFCGKSSRISDEEALEMVKRSLMAYDEAPVASVTATTTELKIKITKRELEMLLANYNVVEVKEELQTEQLLSPLFYVDGTLEMQPRSWQPSL

Query:  QSIPE
        QSIPE
Subjt:  QSIPE

KAG6600784.1 hypothetical protein SDJN03_06017, partial [Cucurbita argyrosperma subsp. sororia]6.9e-50100Show/hide
Query:  MGNCVSNKIFCGKSSRISDEEALEMVKRSLMAYDEAPVASVTATTTELKIKITKRELEMLLANYNVVEVKEELQTEQLLSPLFYVDGTLEMQPRSWQPSL
        MGNCVSNKIFCGKSSRISDEEALEMVKRSLMAYDEAPVASVTATTTELKIKITKRELEMLLANYNVVEVKEELQTEQLLSPLFYVDGTLEMQPRSWQPSL
Subjt:  MGNCVSNKIFCGKSSRISDEEALEMVKRSLMAYDEAPVASVTATTTELKIKITKRELEMLLANYNVVEVKEELQTEQLLSPLFYVDGTLEMQPRSWQPSL

Query:  QSIPEAD
        QSIPEAD
Subjt:  QSIPEAD

XP_011652736.1 uncharacterized protein LOC105435072 [Cucumis sativus]3.7e-2764.04Show/hide
Query:  MGNCVSNKIFCGKSSRI-SDEEALEMVKRSLMAYDEAPVASVTATTTELKIKITKRELEMLLANYNVVEVKEELQTEQLLS-PL-----FYVDGTLEMQP
        MGNCVS+   CGK +RI SDEEALEM+KR +MAYDE P +S  ATTTE+KIKITK+ELEMLL NY VVEVK+EL +    S P+       +D   EMQP
Subjt:  MGNCVSNKIFCGKSSRI-SDEEALEMVKRSLMAYDEAPVASVTATTTELKIKITKRELEMLLANYNVVEVKEELQTEQLLS-PL-----FYVDGTLEMQP

Query:  RSWQPSLQSIPEAD
        RSW+PSLQSIPE D
Subjt:  RSWQPSLQSIPEAD

XP_016903026.1 PREDICTED: uncharacterized protein LOC103501581 [Cucumis melo]5.0e-3269.23Show/hide
Query:  MGNCVSNKIFCGKSSRISDEEALEMVKRSLMAY-------DEAP---VASVTATTTELKIKITKRELEMLLANYNVVEVKEELQTEQLLSPLFYVDGTLE
        MGNCVS+K  CGKS+RISDEEALEM+KR++MAY       DE P   VA+ T TTTE+KIKITKRELEMLL NY VVEVKEEL T Q LS L  +D  +E
Subjt:  MGNCVSNKIFCGKSSRISDEEALEMVKRSLMAY-------DEAP---VASVTATTTELKIKITKRELEMLLANYNVVEVKEELQTEQLLSPLFYVDGTLE

Query:  MQPRSWQPSLQSIPEAD
        MQPRSW+PSLQSIPE D
Subjt:  MQPRSWQPSLQSIPEAD

XP_038904231.1 uncharacterized protein LOC120090574 [Benincasa hispida]9.8e-1250.91Show/hide
Query:  MGNCVSNKIFCGKSSRIS--DEEALEMVKRSLMAYDEAPVASVTATTTELKIKITKRELEMLLANYNVVEVKEELQTEQLLSPLFYVDGTLE-MQPRSWQ
        MGNC SNK +  ++  +S  DEEA+E V+R L+ +D A   S   TTTELKI+ITKRELE LL+  +V    EEL   +LLS L  V    E    RSW+
Subjt:  MGNCVSNKIFCGKSSRIS--DEEALEMVKRSLMAYDEAPVASVTATTTELKIKITKRELEMLLANYNVVEVKEELQTEQLLSPLFYVDGTLE-MQPRSWQ

Query:  PSLQSIPEAD
        PSLQSIPE +
Subjt:  PSLQSIPEAD

TrEMBL top hitse value%identityAlignment
A0A0A0L2D8 Uncharacterized protein3.1e-1150Show/hide
Query:  MGNCVSNKIFCGKSSRIS--DEEALEMVKRSLMAYDEAPVASVTATTTELKIKITKRELEMLLANYNVVEVKEELQTEQLLSPLFYVDGTLE-MQPRSWQ
        MGNC SNK        +S  DEE  EM++R L+  + A   S  +TTTELKI+ITKRELE LL   +V    EEL   +LLS L  V  T E    RSW+
Subjt:  MGNCVSNKIFCGKSSRIS--DEEALEMVKRSLMAYDEAPVASVTATTTELKIKITKRELEMLLANYNVVEVKEELQTEQLLSPLFYVDGTLE-MQPRSWQ

Query:  PSLQSIPEAD
        PSLQSIPE +
Subjt:  PSLQSIPEAD

A0A0A0L7M3 Uncharacterized protein1.8e-2764.04Show/hide
Query:  MGNCVSNKIFCGKSSRI-SDEEALEMVKRSLMAYDEAPVASVTATTTELKIKITKRELEMLLANYNVVEVKEELQTEQLLS-PL-----FYVDGTLEMQP
        MGNCVS+   CGK +RI SDEEALEM+KR +MAYDE P +S  ATTTE+KIKITK+ELEMLL NY VVEVK+EL +    S P+       +D   EMQP
Subjt:  MGNCVSNKIFCGKSSRI-SDEEALEMVKRSLMAYDEAPVASVTATTTELKIKITKRELEMLLANYNVVEVKEELQTEQLLS-PL-----FYVDGTLEMQP

Query:  RSWQPSLQSIPEAD
        RSW+PSLQSIPE D
Subjt:  RSWQPSLQSIPEAD

A0A1S4E465 uncharacterized protein LOC1035015812.4e-3269.23Show/hide
Query:  MGNCVSNKIFCGKSSRISDEEALEMVKRSLMAY-------DEAP---VASVTATTTELKIKITKRELEMLLANYNVVEVKEELQTEQLLSPLFYVDGTLE
        MGNCVS+K  CGKS+RISDEEALEM+KR++MAY       DE P   VA+ T TTTE+KIKITKRELEMLL NY VVEVKEEL T Q LS L  +D  +E
Subjt:  MGNCVSNKIFCGKSSRISDEEALEMVKRSLMAY-------DEAP---VASVTATTTELKIKITKRELEMLLANYNVVEVKEELQTEQLLSPLFYVDGTLE

Query:  MQPRSWQPSLQSIPEAD
        MQPRSW+PSLQSIPE D
Subjt:  MQPRSWQPSLQSIPEAD

A0A5D3BTP7 DUF4228 domain protein2.4e-3269.23Show/hide
Query:  MGNCVSNKIFCGKSSRISDEEALEMVKRSLMAY-------DEAP---VASVTATTTELKIKITKRELEMLLANYNVVEVKEELQTEQLLSPLFYVDGTLE
        MGNCVS+K  CGKS+RISDEEALEM+KR++MAY       DE P   VA+ T TTTE+KIKITKRELEMLL NY VVEVKEEL T Q LS L  +D  +E
Subjt:  MGNCVSNKIFCGKSSRISDEEALEMVKRSLMAY-------DEAP---VASVTATTTELKIKITKRELEMLLANYNVVEVKEELQTEQLLSPLFYVDGTLE

Query:  MQPRSWQPSLQSIPEAD
        MQPRSW+PSLQSIPE D
Subjt:  MQPRSWQPSLQSIPEAD

A0A6J1J7P7 uncharacterized protein LOC1114833156.8e-1148.6Show/hide
Query:  MGNCVSNKIFCGKSSRISDEEALEMVKRSLMAYDEAPVAS--VTATTTELKIKITKRELEMLLANYNVVEVKEELQTEQLLSPLFYVDGTLEMQPRSWQP
        MGNC SNK          +EE +E +KR L A D A  +S   T TTTE+KI++TKRELE LL+    VEV+E   TE LL  +   D +     RSW+P
Subjt:  MGNCVSNKIFCGKSSRISDEEALEMVKRSLMAYDEAPVAS--VTATTTELKIKITKRELEMLLANYNVVEVKEELQTEQLLSPLFYVDGTLEMQPRSWQP

Query:  SLQSIPE
        SLQSIPE
Subjt:  SLQSIPE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G21920.1 unknown protein3.6e-0439.24Show/hide
Query:  ASVTATTTELKIKITKRELEMLLANYNVVEVKEELQTEQLLSPLFY----------VDGTLEMQPRSWQPSLQSIPEAD
        +S ++   E+KI+ITK+ELE L+ N  +    + L  E++LS L +          VD T   QP  W+P LQSIPE D
Subjt:  ASVTATTTELKIKITKRELEMLLANYNVVEVKEELQTEQLLSPLFY----------VDGTLEMQPRSWQPSLQSIPEAD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAACTGCGTTTCCAACAAAATTTTCTGTGGGAAATCATCAAGAATTAGTGATGAAGAGGCTCTGGAGATGGTGAAGAGAAGCCTCATGGCCTACGACGAGGCTCC
GGTGGCCTCTGTGACGGCGACCACGACAGAGTTGAAGATCAAGATCACAAAGAGAGAGCTGGAGATGTTACTAGCTAATTATAATGTGGTAGAGGTGAAGGAAGAGCTGC
AGACAGAGCAGCTGTTGTCGCCACTGTTTTACGTCGATGGTACGCTCGAGATGCAGCCACGATCGTGGCAGCCTTCCCTGCAGAGTATCCCTGAGGCGGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAAACTGCGTTTCCAACAAAATTTTCTGTGGGAAATCATCAAGAATTAGTGATGAAGAGGCTCTGGAGATGGTGAAGAGAAGCCTCATGGCCTACGACGAGGCTCC
GGTGGCCTCTGTGACGGCGACCACGACAGAGTTGAAGATCAAGATCACAAAGAGAGAGCTGGAGATGTTACTAGCTAATTATAATGTGGTAGAGGTGAAGGAAGAGCTGC
AGACAGAGCAGCTGTTGTCGCCACTGTTTTACGTCGATGGTACGCTCGAGATGCAGCCACGATCGTGGCAGCCTTCCCTGCAGAGTATCCCTGAGGCGGATTGA
Protein sequenceShow/hide protein sequence
MGNCVSNKIFCGKSSRISDEEALEMVKRSLMAYDEAPVASVTATTTELKIKITKRELEMLLANYNVVEVKEELQTEQLLSPLFYVDGTLEMQPRSWQPSLQSIPEAD