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Carg00086 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg00086
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionprotein CHROMATIN REMODELING 19
Genome locationCarg_Chr04:5193066..5193779
RNA-Seq ExpressionCarg00086
SyntenyCarg00086
Gene Ontology termsGO:0005524 - ATP binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7031432.1 Protein CHROMATIN REMODELING 19, partial [Cucurbita argyrosperma subsp. argyrosperma]4.4e-86100Show/hide
Query:  MQQGLSFCLILPASLIDSVCSSSLLTVFSAGNFSQVLHHSMKRVFDEISDDEWSNHSFKPSRVFSKPQTQPPIPPPIESFAYQPPSLYISDDSGDDCVVV
        MQQGLSFCLILPASLIDSVCSSSLLTVFSAGNFSQVLHHSMKRVFDEISDDEWSNHSFKPSRVFSKPQTQPPIPPPIESFAYQPPSLYISDDSGDDCVVV
Subjt:  MQQGLSFCLILPASLIDSVCSSSLLTVFSAGNFSQVLHHSMKRVFDEISDDEWSNHSFKPSRVFSKPQTQPPIPPPIESFAYQPPSLYISDDSGDDCVVV

Query:  MESSKNFKESLEDDDVEVEGVKSSTAMSRGRRFVVDDEDEESEKELTEVCDVRSTSEEEEEEGGGGGGGGGGQGG
        MESSKNFKESLEDDDVEVEGVKSSTAMSRGRRFVVDDEDEESEKELTEVCDVRSTSEEEEEEGGGGGGGGGGQGG
Subjt:  MESSKNFKESLEDDDVEVEGVKSSTAMSRGRRFVVDDEDEESEKELTEVCDVRSTSEEEEEEGGGGGGGGGGQGG

XP_004140399.1 protein CHROMATIN REMODELING 19 [Cucumis sativus]3.3e-4983.74Show/hide
Query:  MKRVFDEISDDEWSNHSFKPSRVFSKPQTQPPIPPPIESFAYQPPSLYISDDSGDDCVVVMESSKNFKESLEDDDVEVEGVKSSTAMSRGRRFVVDDEDE
        MKRVF+EISD+EWSNHSFKPSRVF+KPQT+P IPPPIESFAY+P  LYISD+S DDCVVVMESSKN++E+LED+DVEVEGVKS+TA+SRGRRFVVDDED+
Subjt:  MKRVFDEISDDEWSNHSFKPSRVFSKPQTQPPIPPPIESFAYQPPSLYISDDSGDDCVVVMESSKNFKESLEDDDVEVEGVKSSTAMSRGRRFVVDDEDE

Query:  ESEKELTEVCDVRSTSEEEEEEG
        ESE+ELTEVCDV+STSEEE EEG
Subjt:  ESEKELTEVCDVRSTSEEEEEEG

XP_022943065.1 protein CHROMATIN REMODELING 19 [Cucurbita moschata]1.7e-5899.18Show/hide
Query:  MKRVFDEISDDEWSNHSFKPSRVFSKPQTQPPIPPPIESFAYQPPSLYISDDSGDDCVVVMESSKNFKESLEDDDVEVEGVKSSTAMSRGRRFVVDDEDE
        MKRVFDEISDDEWSNHSFKPSRVFSKPQTQPPIPPPIESFAY+PPSLYISDDSGDDCVVVMESSKNFKESLEDDDVEVEGVKSSTAMSRGRRFVVDDEDE
Subjt:  MKRVFDEISDDEWSNHSFKPSRVFSKPQTQPPIPPPIESFAYQPPSLYISDDSGDDCVVVMESSKNFKESLEDDDVEVEGVKSSTAMSRGRRFVVDDEDE

Query:  ESEKELTEVCDVRSTSEEEEEE
        ESEKELTEVCDVRSTSEEEEEE
Subjt:  ESEKELTEVCDVRSTSEEEEEE

XP_022991239.1 protein CHROMATIN REMODELING 19 [Cucurbita maxima]5.1e-5898.36Show/hide
Query:  MKRVFDEISDDEWSNHSFKPSRVFSKPQTQPPIPPPIESFAYQPPSLYISDDSGDDCVVVMESSKNFKESLEDDDVEVEGVKSSTAMSRGRRFVVDDEDE
        MKRVFDEISDDEWSNHSFKPSRVFSKPQTQPPIPPPIESFAY+PPSLYISDDSGDDCVVVMESSKNFKESLEDDDVEVEGVKSST MSRGRRFVVDDEDE
Subjt:  MKRVFDEISDDEWSNHSFKPSRVFSKPQTQPPIPPPIESFAYQPPSLYISDDSGDDCVVVMESSKNFKESLEDDDVEVEGVKSSTAMSRGRRFVVDDEDE

Query:  ESEKELTEVCDVRSTSEEEEEE
        ESEKELTEVCDVRSTSEEEEEE
Subjt:  ESEKELTEVCDVRSTSEEEEEE

XP_023545956.1 LOW QUALITY PROTEIN: protein CHROMATIN REMODELING 19 [Cucurbita pepo subsp. pepo]1.7e-5895.52Show/hide
Query:  MKRVFDEISDDEWSNHSFKPSRVFSKPQTQPPIPPPIESFAYQPPSLYISDDSGDDCVVVMESSKNFKESLEDDDVEVEGVKSSTAMSRGRRFVVDDEDE
        MKRVFDEISDDEWSNHSFKPSRVFSKPQTQPPIPPPIESFAYQPPSLYISDDSGDDCVVVMESSKNFKESLEDDDVEVEGVKSST MSRGRRFVVDDEDE
Subjt:  MKRVFDEISDDEWSNHSFKPSRVFSKPQTQPPIPPPIESFAYQPPSLYISDDSGDDCVVVMESSKNFKESLEDDDVEVEGVKSSTAMSRGRRFVVDDEDE

Query:  ESEKELTEVCDVRSTSEEEEEEGGGGGGGGGGQG
        ESEKELTEVCDVRSTS   EE GGGGGGGGG QG
Subjt:  ESEKELTEVCDVRSTSEEEEEEGGGGGGGGGGQG

TrEMBL top hitse value%identityAlignment
A0A0A0KQW9 Uncharacterized protein1.6e-4983.74Show/hide
Query:  MKRVFDEISDDEWSNHSFKPSRVFSKPQTQPPIPPPIESFAYQPPSLYISDDSGDDCVVVMESSKNFKESLEDDDVEVEGVKSSTAMSRGRRFVVDDEDE
        MKRVF+EISD+EWSNHSFKPSRVF+KPQT+P IPPPIESFAY+P  LYISD+S DDCVVVMESSKN++E+LED+DVEVEGVKS+TA+SRGRRFVVDDED+
Subjt:  MKRVFDEISDDEWSNHSFKPSRVFSKPQTQPPIPPPIESFAYQPPSLYISDDSGDDCVVVMESSKNFKESLEDDDVEVEGVKSSTAMSRGRRFVVDDEDE

Query:  ESEKELTEVCDVRSTSEEEEEEG
        ESE+ELTEVCDV+STSEEE EEG
Subjt:  ESEKELTEVCDVRSTSEEEEEEG

A0A1S3CC04 protein CHROMATIN REMODELING 19 isoform X11.3e-4681.97Show/hide
Query:  MKRVFDEISDDEWSNHSFKPSRVFSKPQTQPPIPPPIESFAYQPPSLYISDDSGDDCVVVMESSKNFKESLEDDDVEVEGVKSSTAMSRGRRFVVDDEDE
        MKRVFDEISD+EWSNHSFKPSRVF+KPQT P IPPPIESFAY+   LYISD+S DDCVVVMESSKN++E+LED+DVEVEGVKS+TA+SRGRRFVVDDEDE
Subjt:  MKRVFDEISDDEWSNHSFKPSRVFSKPQTQPPIPPPIESFAYQPPSLYISDDSGDDCVVVMESSKNFKESLEDDDVEVEGVKSSTAMSRGRRFVVDDEDE

Query:  ESEKELTEVCDVRSTSEEEEEE
        ESE+ELTEV DV+STS++E EE
Subjt:  ESEKELTEVCDVRSTSEEEEEE

A0A5A7VJ30 Protein CHROMATIN REMODELING 19 isoform X31.3e-4681.97Show/hide
Query:  MKRVFDEISDDEWSNHSFKPSRVFSKPQTQPPIPPPIESFAYQPPSLYISDDSGDDCVVVMESSKNFKESLEDDDVEVEGVKSSTAMSRGRRFVVDDEDE
        MKRVFDEISD+EWSNHSFKPSRVF+KPQT P IPPPIESFAY+   LYISD+S DDCVVVMESSKN++E+LED+DVEVEGVKS+TA+SRGRRFVVDDEDE
Subjt:  MKRVFDEISDDEWSNHSFKPSRVFSKPQTQPPIPPPIESFAYQPPSLYISDDSGDDCVVVMESSKNFKESLEDDDVEVEGVKSSTAMSRGRRFVVDDEDE

Query:  ESEKELTEVCDVRSTSEEEEEE
        ESE+ELTEV DV+STS++E EE
Subjt:  ESEKELTEVCDVRSTSEEEEEE

A0A6J1FXC0 protein CHROMATIN REMODELING 198.4e-5999.18Show/hide
Query:  MKRVFDEISDDEWSNHSFKPSRVFSKPQTQPPIPPPIESFAYQPPSLYISDDSGDDCVVVMESSKNFKESLEDDDVEVEGVKSSTAMSRGRRFVVDDEDE
        MKRVFDEISDDEWSNHSFKPSRVFSKPQTQPPIPPPIESFAY+PPSLYISDDSGDDCVVVMESSKNFKESLEDDDVEVEGVKSSTAMSRGRRFVVDDEDE
Subjt:  MKRVFDEISDDEWSNHSFKPSRVFSKPQTQPPIPPPIESFAYQPPSLYISDDSGDDCVVVMESSKNFKESLEDDDVEVEGVKSSTAMSRGRRFVVDDEDE

Query:  ESEKELTEVCDVRSTSEEEEEE
        ESEKELTEVCDVRSTSEEEEEE
Subjt:  ESEKELTEVCDVRSTSEEEEEE

A0A6J1JU99 protein CHROMATIN REMODELING 192.5e-5898.36Show/hide
Query:  MKRVFDEISDDEWSNHSFKPSRVFSKPQTQPPIPPPIESFAYQPPSLYISDDSGDDCVVVMESSKNFKESLEDDDVEVEGVKSSTAMSRGRRFVVDDEDE
        MKRVFDEISDDEWSNHSFKPSRVFSKPQTQPPIPPPIESFAY+PPSLYISDDSGDDCVVVMESSKNFKESLEDDDVEVEGVKSST MSRGRRFVVDDEDE
Subjt:  MKRVFDEISDDEWSNHSFKPSRVFSKPQTQPPIPPPIESFAYQPPSLYISDDSGDDCVVVMESSKNFKESLEDDDVEVEGVKSSTAMSRGRRFVVDDEDE

Query:  ESEKELTEVCDVRSTSEEEEEE
        ESEKELTEVCDVRSTSEEEEEE
Subjt:  ESEKELTEVCDVRSTSEEEEEE

SwissProt top hitse value%identityAlignment
Q9ZUL5 Protein CHROMATIN REMODELING 194.8e-1139.47Show/hide
Query:  MKRVFDEISDDEWSNHSFKPSRVFSKPQTQPPI------PPPIESFAYQPPSLYI---SDDSGDDCVVVMESSK--------NFKESLEDDDVEVEGVKS
        MKR FDEIS++EWS HSF  SRV  +P+T           P IESFA++ PS  +   S+ S  DCV + +           N ++ L +D+ EVE  K 
Subjt:  MKRVFDEISDDEWSNHSFKPSRVFSKPQTQPPI------PPPIESFAYQPPSLYI---SDDSGDDCVVVMESSK--------NFKESLEDDDVEVEGVKS

Query:  STAMSR-GRRFVVDDEDEESEKELTEVCDVRSTSEEEEEEGGGGGGGGGGQG
            +R GRRFV++DE+   + +     D   +S  E+E GGGGGG GG +G
Subjt:  STAMSR-GRRFVVDDEDEESEKELTEVCDVRSTSEEEEEEGGGGGGGGGGQG

Arabidopsis top hitse value%identityAlignment
AT2G02090.1 SNF2 domain-containing protein / helicase domain-containing protein3.4e-1239.47Show/hide
Query:  MKRVFDEISDDEWSNHSFKPSRVFSKPQTQPPI------PPPIESFAYQPPSLYI---SDDSGDDCVVVMESSK--------NFKESLEDDDVEVEGVKS
        MKR FDEIS++EWS HSF  SRV  +P+T           P IESFA++ PS  +   S+ S  DCV + +           N ++ L +D+ EVE  K 
Subjt:  MKRVFDEISDDEWSNHSFKPSRVFSKPQTQPPI------PPPIESFAYQPPSLYI---SDDSGDDCVVVMESSK--------NFKESLEDDDVEVEGVKS

Query:  STAMSR-GRRFVVDDEDEESEKELTEVCDVRSTSEEEEEEGGGGGGGGGGQG
            +R GRRFV++DE+   + +     D   +S  E+E GGGGGG GG +G
Subjt:  STAMSR-GRRFVVDDEDEESEKELTEVCDVRSTSEEEEEEGGGGGGGGGGQG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGCAGGGCTTAAGCTTCTGTTTGATTCTTCCCGCTTCCTTGATCGATTCCGTCTGTTCGTCTTCACTTCTGACTGTATTCTCTGCCGGGAATTTCTCGCAGGTCCT
CCATCACAGCATGAAGCGTGTCTTCGACGAAATTTCAGATGACGAGTGGTCGAATCACTCTTTTAAGCCCTCTCGTGTCTTCAGCAAGCCGCAGACTCAACCTCCGATCC
CTCCTCCGATTGAATCTTTTGCATACCAACCGCCGTCGCTGTATATTTCCGATGATAGCGGTGACGATTGTGTCGTAGTCATGGAAAGTTCCAAGAATTTCAAGGAAAGT
TTGGAGGATGACGATGTTGAGGTTGAGGGAGTGAAGTCCTCCACGGCGATGAGTCGTGGCCGTCGATTTGTGGTGGATGATGAAGATGAAGAAAGTGAGAAGGAATTGAC
CGAGGTTTGTGATGTAAGGTCGACGAGTGAGGAGGAGGAGGAGGAGGGAGGAGGAGGAGGAGGAGGAGGAGGAGGACAGGGAGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGCAGCAGGGCTTAAGCTTCTGTTTGATTCTTCCCGCTTCCTTGATCGATTCCGTCTGTTCGTCTTCACTTCTGACTGTATTCTCTGCCGGGAATTTCTCGCAGGTCCT
CCATCACAGCATGAAGCGTGTCTTCGACGAAATTTCAGATGACGAGTGGTCGAATCACTCTTTTAAGCCCTCTCGTGTCTTCAGCAAGCCGCAGACTCAACCTCCGATCC
CTCCTCCGATTGAATCTTTTGCATACCAACCGCCGTCGCTGTATATTTCCGATGATAGCGGTGACGATTGTGTCGTAGTCATGGAAAGTTCCAAGAATTTCAAGGAAAGT
TTGGAGGATGACGATGTTGAGGTTGAGGGAGTGAAGTCCTCCACGGCGATGAGTCGTGGCCGTCGATTTGTGGTGGATGATGAAGATGAAGAAAGTGAGAAGGAATTGAC
CGAGGTTTGTGATGTAAGGTCGACGAGTGAGGAGGAGGAGGAGGAGGGAGGAGGAGGAGGAGGAGGAGGAGGAGGACAGGGAGGATGA
Protein sequenceShow/hide protein sequence
MQQGLSFCLILPASLIDSVCSSSLLTVFSAGNFSQVLHHSMKRVFDEISDDEWSNHSFKPSRVFSKPQTQPPIPPPIESFAYQPPSLYISDDSGDDCVVVMESSKNFKES
LEDDDVEVEGVKSSTAMSRGRRFVVDDEDEESEKELTEVCDVRSTSEEEEEEGGGGGGGGGGQGG