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Carg00105 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg00105
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionProtein CLAVATA3/ESR-related 17
Genome locationCarg_Chr04:5331719..5332042
RNA-Seq ExpressionCarg00105
SyntenyCarg00105
Gene Ontology termsGO:0010078 - maintenance of root meristem identity (biological process)
GO:0010088 - phloem development (biological process)
GO:0045595 - regulation of cell differentiation (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR033249 - CLAVATA3/ESR (CLE)-related protein, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0063335.1 putative Clavata3/esr-related 16 [Cucumis melo var. makuwa]1.1e-3472.32Show/hide
Query:  MRVGVERGRNGGNGTKRQAGGAVVAAAIFFICLIFVLSRMTLSSAAVRGVNVPTLTKSATLHRKTHVFETEEVFKPPAGFKIHA-----DVADIVYEDDK
        MRVGVERGRNGG G KR+AG     AAIFFI LI ++SRM LSSAA++ VNV  L KS  LHRKTH+FETEEVFKPPAGFK+H      DV DIVYEDDK
Subjt:  MRVGVERGRNGGNGTKRQAGGAVVAAAIFFICLIFVLSRMTLSSAAVRGVNVPTLTKSATLHRKTHVFETEEVFKPPAGFKIHA-----DVADIVYEDDK

Query:  RVVHTGPNPLHN
        RV+HTGPNPLHN
Subjt:  RVVHTGPNPLHN

KAE8648231.1 hypothetical protein Csa_018474 [Cucumis sativus]7.0e-2669.61Show/hide
Query:  MRVGVERGRNGGNGTKRQAGGAVVAAAIFFICLIFVLSRMTLSSAAVRGVNVPTLTKSATLHRKTHVFETEEVFKPPAGFKIHA-----DVADIVYEDDK
        MRVGVERGRNGG G K +AG     AAIFFI LI V+SRM LSSAA + VN   LTKS  LHRKTH+FETEEVFKPPAGFK+H      DV DIVYEDDK
Subjt:  MRVGVERGRNGGNGTKRQAGGAVVAAAIFFICLIFVLSRMTLSSAAVRGVNVPTLTKSATLHRKTHVFETEEVFKPPAGFKIHA-----DVADIVYEDDK

Query:  RV
        R+
Subjt:  RV

KAF9842972.1 hypothetical protein H0E87_011785 [Populus deltoides]3.0e-0535.78Show/hide
Query:  RVGVERGRNGGNGTKRQAGGAVVAAAIFFICLIFVLSRMTLSSAAVRGVNVPTLTKSATLHRKTHVFETEEVFKPP---AGFKIHADVADIVYEDDKRVV
        +VGVE  R       R+  GA  AA IF   ++ +L+++ +        + P      +L RK  VFET  +   P       I     D +YEDDKR++
Subjt:  RVGVERGRNGGNGTKRQAGGAVVAAAIFFICLIFVLSRMTLSSAAVRGVNVPTLTKSATLHRKTHVFETEEVFKPP---AGFKIHADVADIVYEDDKRVV

Query:  HTGPNPLHN
        HTGPNPLHN
Subjt:  HTGPNPLHN

KAG6600814.1 CLAVATA3/ESR (CLE)-related protein 16, partial [Cucurbita argyrosperma subsp. sororia]1.3e-51100Show/hide
Query:  MRVGVERGRNGGNGTKRQAGGAVVAAAIFFICLIFVLSRMTLSSAAVRGVNVPTLTKSATLHRKTHVFETEEVFKPPAGFKIHADVADIVYEDDKRVVHT
        MRVGVERGRNGGNGTKRQAGGAVVAAAIFFICLIFVLSRMTLSSAAVRGVNVPTLTKSATLHRKTHVFETEEVFKPPAGFKIHADVADIVYEDDKRVVHT
Subjt:  MRVGVERGRNGGNGTKRQAGGAVVAAAIFFICLIFVLSRMTLSSAAVRGVNVPTLTKSATLHRKTHVFETEEVFKPPAGFKIHADVADIVYEDDKRVVHT

Query:  GPNPLHN
        GPNPLHN
Subjt:  GPNPLHN

PNT15890.1 hypothetical protein POPTR_010G111200 [Populus trichocarpa]2.3e-0537.61Show/hide
Query:  RVGVERGRNGGNGTKRQAGGAVVAAAIFFICLIFVLSRMTLSSAAVRGVNVPTLTKSATLHRKTHVFETEEVFKPP---AGFKIHADVADIVYEDDKRVV
        +VGVE  R       R+  GA  AA IF   ++ +L+++ +        + P      +L RK  VFET  V   P       I     D VYEDDKR +
Subjt:  RVGVERGRNGGNGTKRQAGGAVVAAAIFFICLIFVLSRMTLSSAAVRGVNVPTLTKSATLHRKTHVFETEEVFKPP---AGFKIHADVADIVYEDDKRVV

Query:  HTGPNPLHN
        HTGPNPLHN
Subjt:  HTGPNPLHN

TrEMBL top hitse value%identityAlignment
A0A0A0KIX6 Uncharacterized protein1.3e-3372.32Show/hide
Query:  MRVGVERGRNGGNGTKRQAGGAVVAAAIFFICLIFVLSRMTLSSAAVRGVNVPTLTKSATLHRKTHVFETEEVFKPPAGFKIHA-----DVADIVYEDDK
        MRVGVERGRNGG G K +AG     AAIFFI LI V+SRM LSSAA + VN   LTKS  LHRKTH+FETEEVFKPPAGFK+H      DV DIVYEDDK
Subjt:  MRVGVERGRNGGNGTKRQAGGAVVAAAIFFICLIFVLSRMTLSSAAVRGVNVPTLTKSATLHRKTHVFETEEVFKPPAGFKIHA-----DVADIVYEDDK

Query:  RVVHTGPNPLHN
        RV+HTGPNPLHN
Subjt:  RVVHTGPNPLHN

A0A5A7VBQ7 Putative Clavata3/esr-related 165.2e-3572.32Show/hide
Query:  MRVGVERGRNGGNGTKRQAGGAVVAAAIFFICLIFVLSRMTLSSAAVRGVNVPTLTKSATLHRKTHVFETEEVFKPPAGFKIHA-----DVADIVYEDDK
        MRVGVERGRNGG G KR+AG     AAIFFI LI ++SRM LSSAA++ VNV  L KS  LHRKTH+FETEEVFKPPAGFK+H      DV DIVYEDDK
Subjt:  MRVGVERGRNGGNGTKRQAGGAVVAAAIFFICLIFVLSRMTLSSAAVRGVNVPTLTKSATLHRKTHVFETEEVFKPPAGFKIHA-----DVADIVYEDDK

Query:  RVVHTGPNPLHN
        RV+HTGPNPLHN
Subjt:  RVVHTGPNPLHN

A0A6A6LVR5 Uncharacterized protein2.5e-0535.85Show/hide
Query:  VERGRNGGNGTKRQAGGAVVAAAIFFICLIFVLSRMTLSSAAVRGVNVPTLTKSATLHRKTHVFETEEVFKPPAGFKIHADV---ADIVYEDDKRVVHTG
        V +G     G +R A G   AA +FF+ ++ +L ++ L  A    V+  T     +L RK    ET+     P+  +   D+   +D VY DDKR++HTG
Subjt:  VERGRNGGNGTKRQAGGAVVAAAIFFICLIFVLSRMTLSSAAVRGVNVPTLTKSATLHRKTHVFETEEVFKPPAGFKIHADV---ADIVYEDDKRVVHTG

Query:  PNPLHN
        PNPLHN
Subjt:  PNPLHN

B9HW54 Uncharacterized protein1.1e-0537.61Show/hide
Query:  RVGVERGRNGGNGTKRQAGGAVVAAAIFFICLIFVLSRMTLSSAAVRGVNVPTLTKSATLHRKTHVFETEEVFKPP---AGFKIHADVADIVYEDDKRVV
        +VGVE  R       R+  GA  AA IF   ++ +L+++ +        + P      +L RK  VFET  V   P       I     D VYEDDKR +
Subjt:  RVGVERGRNGGNGTKRQAGGAVVAAAIFFICLIFVLSRMTLSSAAVRGVNVPTLTKSATLHRKTHVFETEEVFKPP---AGFKIHADVADIVYEDDKRVV

Query:  HTGPNPLHN
        HTGPNPLHN
Subjt:  HTGPNPLHN

V4UGP5 Uncharacterized protein1.5e-0535.96Show/hide
Query:  MRVGVERGRNGGNGTKRQAGGAVVAAAIFFICLIFVLSRMTLSSAAVRGVNVPTLTKSATLHRKTHVFETEEVFKPP----AGFKIHADV---ADIVYED
        M++ V R      G +R+  GA  A+  F++ LIF L  +  +       +  T T S+   RKT  F TE  F  P    +G  +  +       VYED
Subjt:  MRVGVERGRNGGNGTKRQAGGAVVAAAIFFICLIFVLSRMTLSSAAVRGVNVPTLTKSATLHRKTHVFETEEVFKPP----AGFKIHADV---ADIVYED

Query:  DKRVVHTGPNPLHN
        DKR++HTGPNPLHN
Subjt:  DKRVVHTGPNPLHN

SwissProt top hitse value%identityAlignment
Q8S8M2 CLAVATA3/ESR (CLE)-related protein 161.3e-0639.76Show/hide
Query:  AAIFFICLIFVLSRMTLSSAAVRGV-NVPTLTKSATLHRKTHVFETEEVFKPPAGFKIHADVADIVYEDDKRVVHTGPNPLHN
        AA+FF C IFV ++  +SS+A+    + P+L + A    +   F+  +      G +   +  D VY+DDKR+VHTGPNPLHN
Subjt:  AAIFFICLIFVLSRMTLSSAAVRGV-NVPTLTKSATLHRKTHVFETEEVFKPPAGFKIHADVADIVYEDDKRVVHTGPNPLHN

Arabidopsis top hitse value%identityAlignment
AT1G70895.1 CLAVATA3/ESR-RELATED 179.5e-0535.64Show/hide
Query:  RNGGNGTKRQAGGAVVAAAIFFICLIFVLSRMTLSSAAVRGVNVPTLTKS--ATLHRKTHVFETEEVFKPPAGFKIHADVADIVYEDDKRVVHTGPNPLH
        R  G G KR+    +      F  + +V  ++ LSS+A  G +   L  S      RK   + T   F+ P          D +Y DDKRVVHTGPNPLH
Subjt:  RNGGNGTKRQAGGAVVAAAIFFICLIFVLSRMTLSSAAVRGVNVPTLTKS--ATLHRKTHVFETEEVFKPPAGFKIHADVADIVYEDDKRVVHTGPNPLH

Query:  N
        N
Subjt:  N

AT1G70895.2 CLAVATA3/ESR-RELATED 179.5e-0535.64Show/hide
Query:  RNGGNGTKRQAGGAVVAAAIFFICLIFVLSRMTLSSAAVRGVNVPTLTKS--ATLHRKTHVFETEEVFKPPAGFKIHADVADIVYEDDKRVVHTGPNPLH
        R  G G KR+    +      F  + +V  ++ LSS+A  G +   L  S      RK   + T   F+ P          D +Y DDKRVVHTGPNPLH
Subjt:  RNGGNGTKRQAGGAVVAAAIFFICLIFVLSRMTLSSAAVRGVNVPTLTKS--ATLHRKTHVFETEEVFKPPAGFKIHADVADIVYEDDKRVVHTGPNPLH

Query:  N
        N
Subjt:  N

AT2G01505.1 CLAVATA3/ESR-RELATED 169.1e-0839.76Show/hide
Query:  AAIFFICLIFVLSRMTLSSAAVRGV-NVPTLTKSATLHRKTHVFETEEVFKPPAGFKIHADVADIVYEDDKRVVHTGPNPLHN
        AA+FF C IFV ++  +SS+A+    + P+L + A    +   F+  +      G +   +  D VY+DDKR+VHTGPNPLHN
Subjt:  AAIFFICLIFVLSRMTLSSAAVRGV-NVPTLTKSATLHRKTHVFETEEVFKPPAGFKIHADVADIVYEDDKRVVHTGPNPLHN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGTGGGTGTAGAGAGAGGAAGAAACGGCGGTAACGGAACCAAGCGGCAGGCGGGAGGAGCAGTCGTCGCCGCCGCAATTTTCTTCATTTGTCTTATTTTCGTGCT
CTCTCGGATGACACTTTCCTCCGCTGCCGTTAGAGGTGTTAACGTCCCCACGTTAACTAAATCCGCCACCCTTCACCGGAAGACCCACGTTTTCGAAACGGAGGAGGTCT
TTAAACCACCGGCCGGTTTCAAAATCCACGCTGACGTTGCGGACATTGTATACGAGGATGATAAACGGGTGGTCCATACCGGCCCAAATCCGCTTCACAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGAGTGGGTGTAGAGAGAGGAAGAAACGGCGGTAACGGAACCAAGCGGCAGGCGGGAGGAGCAGTCGTCGCCGCCGCAATTTTCTTCATTTGTCTTATTTTCGTGCT
CTCTCGGATGACACTTTCCTCCGCTGCCGTTAGAGGTGTTAACGTCCCCACGTTAACTAAATCCGCCACCCTTCACCGGAAGACCCACGTTTTCGAAACGGAGGAGGTCT
TTAAACCACCGGCCGGTTTCAAAATCCACGCTGACGTTGCGGACATTGTATACGAGGATGATAAACGGGTGGTCCATACCGGCCCAAATCCGCTTCACAATTAG
Protein sequenceShow/hide protein sequence
MRVGVERGRNGGNGTKRQAGGAVVAAAIFFICLIFVLSRMTLSSAAVRGVNVPTLTKSATLHRKTHVFETEEVFKPPAGFKIHADVADIVYEDDKRVVHTGPNPLHN