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Carg00115 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg00115
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionmyb-related transcription factor, partner of profilin-like
Genome locationCarg_Chr04:5417223..5417597
RNA-Seq ExpressionCarg00115
SyntenyCarg00115
Gene Ontology termsGO:0016020 - membrane (cellular component)
GO:0016740 - transferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600825.1 hypothetical protein SDJN03_06058, partial [Cucurbita argyrosperma subsp. sororia]2.9e-6099.19Show/hide
Query:  MCIQTRPRYALFIFSFLFVLSINVVLTHGFLSSKKLDESTGGDDPRVKCTPCTHNPPPPPPPPKKPSPAYCPPPPPPPSSFIYILGPPGNLYPIDRDFAG
        MCIQTRPRYALFIFSF FVLSINVVLTHGFLSSKKLDESTGGDDPRVKCTPCTHNPPPPPPPPKKPSPAYCPPPPPPPSSFIYILGPPGNLYPIDRDFAG
Subjt:  MCIQTRPRYALFIFSFLFVLSINVVLTHGFLSSKKLDESTGGDDPRVKCTPCTHNPPPPPPPPKKPSPAYCPPPPPPPSSFIYILGPPGNLYPIDRDFAG

Query:  ADRRRVVVELSAVALFGLIGFLGV
        ADRRRVVVELSAVALFGLIGFLGV
Subjt:  ADRRRVVVELSAVALFGLIGFLGV

KAG7031461.1 hypothetical protein SDJN02_05501, partial [Cucurbita argyrosperma subsp. argyrosperma]1.0e-60100Show/hide
Query:  MCIQTRPRYALFIFSFLFVLSINVVLTHGFLSSKKLDESTGGDDPRVKCTPCTHNPPPPPPPPKKPSPAYCPPPPPPPSSFIYILGPPGNLYPIDRDFAG
        MCIQTRPRYALFIFSFLFVLSINVVLTHGFLSSKKLDESTGGDDPRVKCTPCTHNPPPPPPPPKKPSPAYCPPPPPPPSSFIYILGPPGNLYPIDRDFAG
Subjt:  MCIQTRPRYALFIFSFLFVLSINVVLTHGFLSSKKLDESTGGDDPRVKCTPCTHNPPPPPPPPKKPSPAYCPPPPPPPSSFIYILGPPGNLYPIDRDFAG

Query:  ADRRRVVVELSAVALFGLIGFLGV
        ADRRRVVVELSAVALFGLIGFLGV
Subjt:  ADRRRVVVELSAVALFGLIGFLGV

KGN50831.1 hypothetical protein Csa_004723 [Cucumis sativus]2.3e-3365.32Show/hide
Query:  MCIQTRPRYALFIFSFLFVLSINVVLTHGFLSSKKLDESTGGDDPRVKCTPCTHNPPPPPPPPKKPSPAYCPPPPPPPSSFIYILGPPGNLYPIDRDFAG
        MCIQ  P Y+L I  F  +LSIN+   HGF+SSKKLDE     D  VKCTPCT   PPPPPPPKKP P YCPPPP PPSSFIY+LGPP NLYPI+ DFA 
Subjt:  MCIQTRPRYALFIFSFLFVLSINVVLTHGFLSSKKLDESTGGDDPRVKCTPCTHNPPPPPPPPKKPSPAYCPPPPPPPSSFIYILGPPGNLYPIDRDFAG

Query:  ADRRRVVVELSAVALFGLIGFLGV
        ADRR V +EL  VA FGLIG + +
Subjt:  ADRRRVVVELSAVALFGLIGFLGV

XP_022942055.1 probable glycosyltransferase 4 [Cucurbita moschata]7.5e-5694.4Show/hide
Query:  MCIQTRPRYALFIFS-FLFVLSINVVLTHGFLSSKKLDESTGGDDPRVKCTPCTHNPPPPPPPPKKPSPAYCPPPPPPPSSFIYILGPPGNLYPIDRDFA
        MCIQTRPRYALFI S F F LS NVVLTHGFLSSKKLDESTGGDDP VKCTPCTHNPPPPPPPPKKPSPAYCPPPPPPPSSFIYILGPPGNLYPIDRDFA
Subjt:  MCIQTRPRYALFIFS-FLFVLSINVVLTHGFLSSKKLDESTGGDDPRVKCTPCTHNPPPPPPPPKKPSPAYCPPPPPPPSSFIYILGPPGNLYPIDRDFA

Query:  GADRRRVVVELSAVALFGLIGFLGV
        GADRRRV VELSAVALFGLIGFLGV
Subjt:  GADRRRVVVELSAVALFGLIGFLGV

XP_023546806.1 formin-like protein 20 [Cucurbita pepo subsp. pepo]2.3e-5796Show/hide
Query:  MCIQTRPRYALFIFS-FLFVLSINVVLTHGFLSSKKLDESTGGDDPRVKCTPCTHNPPPPPPPPKKPSPAYCPPPPPPPSSFIYILGPPGNLYPIDRDFA
        MCIQTRPRYALFIFS F+F LSINVVLTHGFLSSKKLDESTGGDDP VKCTPCTHNPPPPPPPPKKPSPAYCPPPPPPPSSFIYILGPPGNLYPIDRDFA
Subjt:  MCIQTRPRYALFIFS-FLFVLSINVVLTHGFLSSKKLDESTGGDDPRVKCTPCTHNPPPPPPPPKKPSPAYCPPPPPPPSSFIYILGPPGNLYPIDRDFA

Query:  GADRRRVVVELSAVALFGLIGFLGV
        GADRRRV VELSAVALFGLIGFLGV
Subjt:  GADRRRVVVELSAVALFGLIGFLGV

TrEMBL top hitse value%identityAlignment
A0A0A0KSV7 Uncharacterized protein1.1e-3365.32Show/hide
Query:  MCIQTRPRYALFIFSFLFVLSINVVLTHGFLSSKKLDESTGGDDPRVKCTPCTHNPPPPPPPPKKPSPAYCPPPPPPPSSFIYILGPPGNLYPIDRDFAG
        MCIQ  P Y+L I  F  +LSIN+   HGF+SSKKLDE     D  VKCTPCT   PPPPPPPKKP P YCPPPP PPSSFIY+LGPP NLYPI+ DFA 
Subjt:  MCIQTRPRYALFIFSFLFVLSINVVLTHGFLSSKKLDESTGGDDPRVKCTPCTHNPPPPPPPPKKPSPAYCPPPPPPPSSFIYILGPPGNLYPIDRDFAG

Query:  ADRRRVVVELSAVALFGLIGFLGV
        ADRR V +EL  VA FGLIG + +
Subjt:  ADRRRVVVELSAVALFGLIGFLGV

A0A5C7HJP2 Uncharacterized protein2.0e-1451.75Show/hide
Query:  HGFLSSKKLDESTGGDDPRVKCTPC---THNPPPPPPPPKKPSPAYCPPPPPPPS--------------SFIYILGPPGNLYPIDRDFAGADRRRVVVEL
        +G   S+KLDESTGG D  VKCTP    T +PPPP PPP  P P   PPPPPPP+              SFIY+ GPPG+LYPID DF+GA RR++   +
Subjt:  HGFLSSKKLDESTGGDDPRVKCTPC---THNPPPPPPPPKKPSPAYCPPPPPPPS--------------SFIYILGPPGNLYPIDRDFAGADRRRVVVEL

Query:  SAVALFGLIGFLGV
        S++ L G +G LGV
Subjt:  SAVALFGLIGFLGV

A0A6J1DRJ1 acrosin-like4.0e-3167.46Show/hide
Query:  MCIQTRPRYALFIFSFLFVLSINVVLTHGFLSSKKLDESTGGDDPRVKCTPCT--HNPPPPPPPPKKPSPAYCPPPPPPPSSFIYILGPPGNLYPIDRDF
        M IQT+      I + L +LSINVV  HG +SS KLD STGGD   VKCTPCT  + PPPPPPPPKKP  +YCPPPPPPPSSFIY+LGPPGNLYPI +DF
Subjt:  MCIQTRPRYALFIFSFLFVLSINVVLTHGFLSSKKLDESTGGDDPRVKCTPCT--HNPPPPPPPPKKPSPAYCPPPPPPPSSFIYILGPPGNLYPIDRDF

Query:  AGADRRRVVVELSAVALFGLIGFLGV
        AG  RRRV VEL  VAL GL+GF+ V
Subjt:  AGADRRRVVVELSAVALFGLIGFLGV

A0A6J1FVH5 probable glycosyltransferase 43.6e-5694.4Show/hide
Query:  MCIQTRPRYALFIFS-FLFVLSINVVLTHGFLSSKKLDESTGGDDPRVKCTPCTHNPPPPPPPPKKPSPAYCPPPPPPPSSFIYILGPPGNLYPIDRDFA
        MCIQTRPRYALFI S F F LS NVVLTHGFLSSKKLDESTGGDDP VKCTPCTHNPPPPPPPPKKPSPAYCPPPPPPPSSFIYILGPPGNLYPIDRDFA
Subjt:  MCIQTRPRYALFIFS-FLFVLSINVVLTHGFLSSKKLDESTGGDDPRVKCTPCTHNPPPPPPPPKKPSPAYCPPPPPPPSSFIYILGPPGNLYPIDRDFA

Query:  GADRRRVVVELSAVALFGLIGFLGV
        GADRRRV VELSAVALFGLIGFLGV
Subjt:  GADRRRVVVELSAVALFGLIGFLGV

A5B8N9 Uncharacterized protein4.5e-1452.38Show/hide
Query:  SSKKLDES--TGGDDPRVKC-------TPCTHNPPP-----PPPPPKKPSPAYCPPPPPPPSSFIYILGPPGNLYPIDRDFAGADRRRVVVELSAVALFG
        +S+KLDES  +G  D  VKC        PC  +PPP     PPPPPKKP   YCPPPPPPP+SF+Y+ GPPG LYPID+D+ GA  R  +V L  +A  G
Subjt:  SSKKLDES--TGGDDPRVKC-------TPCTHNPPP-----PPPPPKKPSPAYCPPPPPPPSSFIYILGPPGNLYPIDRDFAGADRRRVVVELSAVALFG

Query:  LIGFL
        L+  L
Subjt:  LIGFL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G02405.1 proline-rich family protein5.4e-0445.78Show/hide
Query:  PRVKCTPCTHNPPPPPPPPKKPS--PAYCPPPPPPPSSFIYILGPPGNLYPIDRDFAGADRRRVVVELSAVA---LFGLIGFL
        P   CTP    PPP PPPPKK S  P+  PPPPPPP        PPG+LYPI+  +  A    V VE  +V    +FG++ FL
Subjt:  PRVKCTPCTHNPPPPPPPPKKPS--PAYCPPPPPPPSSFIYILGPPGNLYPIDRDFAGADRRRVVVELSAVA---LFGLIGFL

AT1G23040.1 hydroxyproline-rich glycoprotein family protein5.2e-1547.27Show/hide
Query:  LSSKKLDESTGGDDPRVKCTP-CTHNPPPPPPPPKKPSPAYCPP----------------PPPPPSSFIYILGPPGNLYPIDRDF-AGADRRRVVVELSA
        L ++KLDE     DP +KC+P C  NPPPP PPP  P P  CPP                PPPPP++F+YI GPPGNLYP+D  F A A +  +VV+LS 
Subjt:  LSSKKLDESTGGDDPRVKCTP-CTHNPPPPPPPPKKPSPAYCPP----------------PPPPPSSFIYILGPPGNLYPIDRDF-AGADRRRVVVELSA

Query:  VALFGLIGFL
        +  FG++ FL
Subjt:  VALFGLIGFL

AT1G70990.1 proline-rich family protein1.1e-1238.81Show/hide
Query:  QTRPRYALFIFSFLFVLSINVVLTHGFLSSKKLDESTGGDDPRVKCTPCTHN-PPPPPPPPKKPSPAY-CPPP------------PPPPSSFIYILGPPG
        +T+   A  + + +F+    ++      +++KL+E     DP +KCTPC  N PPP PPPP  P P+  CPPP            PPPPS++IY+ GPPG
Subjt:  QTRPRYALFIFSFLFVLSINVVLTHGFLSSKKLDESTGGDDPRVKCTPCTHN-PPPPPPPPKKPSPAY-CPPP------------PPPPSSFIYILGPPG

Query:  NLYPIDRDF-AGADRRRVVVELSAVALFGLIGFL
         LYPID+ F A   +   VV++S +  FG++ FL
Subjt:  NLYPIDRDF-AGADRRRVVVELSAVALFGLIGFL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCATCCAAACGAGGCCTCGTTATGCTCTGTTCATCTTCAGCTTCTTATTCGTTCTTTCAATCAATGTAGTACTCACCCATGGCTTCCTCTCTTCCAAGAAGCTTGA
TGAATCCACCGGCGGGGACGATCCCAGAGTCAAGTGTACACCCTGCACCCATAATCCGCCACCCCCACCGCCCCCACCGAAGAAACCGTCACCGGCCTACTGCCCTCCGC
CACCACCTCCTCCGTCGTCTTTCATTTACATACTCGGCCCCCCCGGAAACTTGTATCCCATTGACCGGGATTTCGCCGGTGCTGATCGAAGGAGGGTAGTCGTGGAGTTG
TCGGCGGTTGCTCTCTTTGGATTGATTGGTTTTCTTGGAGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGCATCCAAACGAGGCCTCGTTATGCTCTGTTCATCTTCAGCTTCTTATTCGTTCTTTCAATCAATGTAGTACTCACCCATGGCTTCCTCTCTTCCAAGAAGCTTGA
TGAATCCACCGGCGGGGACGATCCCAGAGTCAAGTGTACACCCTGCACCCATAATCCGCCACCCCCACCGCCCCCACCGAAGAAACCGTCACCGGCCTACTGCCCTCCGC
CACCACCTCCTCCGTCGTCTTTCATTTACATACTCGGCCCCCCCGGAAACTTGTATCCCATTGACCGGGATTTCGCCGGTGCTGATCGAAGGAGGGTAGTCGTGGAGTTG
TCGGCGGTTGCTCTCTTTGGATTGATTGGTTTTCTTGGAGTTTGA
Protein sequenceShow/hide protein sequence
MCIQTRPRYALFIFSFLFVLSINVVLTHGFLSSKKLDESTGGDDPRVKCTPCTHNPPPPPPPPKKPSPAYCPPPPPPPSSFIYILGPPGNLYPIDRDFAGADRRRVVVEL
SAVALFGLIGFLGV