; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg00130 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg00130
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionubiquitin-conjugating enzyme E2 variant 1B-like
Genome locationCarg_Chr04:5501515..5505682
RNA-Seq ExpressionCarg00130
SyntenyCarg00130
Gene Ontology termsGO:0006301 - postreplication repair (biological process)
GO:0070534 - protein K63-linked ubiquitination (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR000608 - Ubiquitin-conjugating enzyme E2
IPR016135 - Ubiquitin-conjugating enzyme/RWD-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008464712.1 PREDICTED: ubiquitin-conjugating enzyme E2 variant 1B-like [Cucumis melo]1.4e-8698.11Show/hide
Query:  MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVE
        MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETG+VE
Subjt:  MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVE

Query:  RNLLPMLAKWQREYTMEDILTQLKKEMMSSQNRKLAQPPEGNEEGRTEQKGLVLKCCIL
        +NLLPMLAKWQREYTMEDILTQLKKEMMSS NRKLAQPPEGNEEGRTEQKGLVLKCCIL
Subjt:  RNLLPMLAKWQREYTMEDILTQLKKEMMSSQNRKLAQPPEGNEEGRTEQKGLVLKCCIL

XP_011655947.1 ubiquitin-conjugating enzyme E2 variant 1B [Cucumis sativus]6.8e-8696.86Show/hide
Query:  MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVE
        MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDD LMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETG+VE
Subjt:  MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVE

Query:  RNLLPMLAKWQREYTMEDILTQLKKEMMSSQNRKLAQPPEGNEEGRTEQKGLVLKCCIL
        +N+LPMLAKWQREYTMEDILTQLKKEMMSS NRKLAQPPEGNEEGRTEQKGLVLKCCIL
Subjt:  RNLLPMLAKWQREYTMEDILTQLKKEMMSSQNRKLAQPPEGNEEGRTEQKGLVLKCCIL

XP_022157781.1 ubiquitin-conjugating enzyme E2 variant 1B [Momordica charantia]1.8e-8698.11Show/hide
Query:  MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVE
        MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETG+VE
Subjt:  MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVE

Query:  RNLLPMLAKWQREYTMEDILTQLKKEMMSSQNRKLAQPPEGNEEGRTEQKGLVLKCCIL
        RNLLPMLAKWQREYTMEDILTQLKKEM SSQNRKL QPPEGNEEGRTEQKGLVLKCCIL
Subjt:  RNLLPMLAKWQREYTMEDILTQLKKEMMSSQNRKLAQPPEGNEEGRTEQKGLVLKCCIL

XP_022942022.1 ubiquitin-conjugating enzyme E2 variant 1B-like [Cucurbita moschata]5.6e-88100Show/hide
Query:  MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVE
        MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVE
Subjt:  MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVE

Query:  RNLLPMLAKWQREYTMEDILTQLKKEMMSSQNRKLAQPPEGNEEGRTEQKGLVLKCCIL
        RNLLPMLAKWQREYTMEDILTQLKKEMMSSQNRKLAQPPEGNEEGRTEQKGLVLKCCIL
Subjt:  RNLLPMLAKWQREYTMEDILTQLKKEMMSSQNRKLAQPPEGNEEGRTEQKGLVLKCCIL

XP_022990687.1 ubiquitin-conjugating enzyme E2 variant 1B-like [Cucurbita maxima]1.6e-8799.37Show/hide
Query:  MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVE
        MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVE
Subjt:  MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVE

Query:  RNLLPMLAKWQREYTMEDILTQLKKEMMSSQNRKLAQPPEGNEEGRTEQKGLVLKCCIL
        RNLLPMLAKWQREYTMEDILTQLKKEMMSSQNRKL QPPEGNEEGRTEQKGLVLKCCIL
Subjt:  RNLLPMLAKWQREYTMEDILTQLKKEMMSSQNRKLAQPPEGNEEGRTEQKGLVLKCCIL

TrEMBL top hitse value%identityAlignment
A0A1S3CM86 ubiquitin-conjugating enzyme E2 variant 1B-like6.7e-8798.11Show/hide
Query:  MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVE
        MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETG+VE
Subjt:  MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVE

Query:  RNLLPMLAKWQREYTMEDILTQLKKEMMSSQNRKLAQPPEGNEEGRTEQKGLVLKCCIL
        +NLLPMLAKWQREYTMEDILTQLKKEMMSS NRKLAQPPEGNEEGRTEQKGLVLKCCIL
Subjt:  RNLLPMLAKWQREYTMEDILTQLKKEMMSSQNRKLAQPPEGNEEGRTEQKGLVLKCCIL

A0A6J1DZ79 ubiquitin-conjugating enzyme E2 variant 1B8.7e-8798.11Show/hide
Query:  MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVE
        MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETG+VE
Subjt:  MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVE

Query:  RNLLPMLAKWQREYTMEDILTQLKKEMMSSQNRKLAQPPEGNEEGRTEQKGLVLKCCIL
        RNLLPMLAKWQREYTMEDILTQLKKEM SSQNRKL QPPEGNEEGRTEQKGLVLKCCIL
Subjt:  RNLLPMLAKWQREYTMEDILTQLKKEMMSSQNRKLAQPPEGNEEGRTEQKGLVLKCCIL

A0A6J1FP33 ubiquitin-conjugating enzyme E2 variant 1B-like2.7e-88100Show/hide
Query:  MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVE
        MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVE
Subjt:  MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVE

Query:  RNLLPMLAKWQREYTMEDILTQLKKEMMSSQNRKLAQPPEGNEEGRTEQKGLVLKCCIL
        RNLLPMLAKWQREYTMEDILTQLKKEMMSSQNRKLAQPPEGNEEGRTEQKGLVLKCCIL
Subjt:  RNLLPMLAKWQREYTMEDILTQLKKEMMSSQNRKLAQPPEGNEEGRTEQKGLVLKCCIL

A0A6J1JJH8 ubiquitin-conjugating enzyme E2 variant 1B-like7.9e-8899.37Show/hide
Query:  MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVE
        MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVE
Subjt:  MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVE

Query:  RNLLPMLAKWQREYTMEDILTQLKKEMMSSQNRKLAQPPEGNEEGRTEQKGLVLKCCIL
        RNLLPMLAKWQREYTMEDILTQLKKEMMSSQNRKL QPPEGNEEGRTEQKGLVLKCCIL
Subjt:  RNLLPMLAKWQREYTMEDILTQLKKEMMSSQNRKLAQPPEGNEEGRTEQKGLVLKCCIL

A0A6J1JTK4 ubiquitin-conjugating enzyme E2 variant 1B-like1.3e-8597.48Show/hide
Query:  MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVE
        MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINM+CVNPETGMVE
Subjt:  MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVE

Query:  RNLLPMLAKWQREYTMEDILTQLKKEMMSSQNRKLAQPPEGNEEGRTEQKGLVLKCCIL
        RNLLPMLAKWQREYTMEDILTQLKKEMMSS NRKL QP EGNEEGRTEQKGLVLKCCIL
Subjt:  RNLLPMLAKWQREYTMEDILTQLKKEMMSSQNRKLAQPPEGNEEGRTEQKGLVLKCCIL

SwissProt top hitse value%identityAlignment
Q5F3Z3 Ubiquitin-conjugating enzyme E2 variant 23.3e-4356.93Show/hide
Query:  GSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVERNLL
        GS V VPRNFRLLEELE G+KG+GDGTVS+G++D +D+ +  WTG IIGPP T +E RIY LK+ CG  YP+ PP VRF ++INM  +N   GMV+   +
Subjt:  GSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVERNLL

Query:  PMLAKWQREYTMEDILTQLKKEMMSSQNRKLAQPPEG
        P+LAKWQ  Y+++ +L +L++ MMS +N KL QPPEG
Subjt:  PMLAKWQREYTMEDILTQLKKEMMSSQNRKLAQPPEG

Q93YP0 Ubiquitin-conjugating enzyme E2 variant 1A4.2e-7076.1Show/hide
Query:  MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVE
        M SE ++VVVPRNFRLLEELERGEKGIGDGTVSYGMDD DD+ MQSWTGTI+GPPNT +EG+I+QLKLFCGK+YP++PP VRFQ+RINM CVNPETG+VE
Subjt:  MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVE

Query:  RNLLPMLAKWQREYTMEDILTQLKKEMMSSQNRKLAQPPEGNEEGRTEQKGLVLKCCIL
         +L PML  W+REYTMEDIL +LKKEMM+S NRKLAQPPEGNEE R + KG   KCC++
Subjt:  RNLLPMLAKWQREYTMEDILTQLKKEMMSSQNRKLAQPPEGNEEGRTEQKGLVLKCCIL

Q9CAB6 Ubiquitin-conjugating enzyme E2 variant 1B6.9e-7378.62Show/hide
Query:  MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVE
        MGSE  +VVVPRNFRLLEELERGEKGIGDGTVSYGMDD DD+LMQSWTGTI+GP NT +EG+I+QLKLFCGKDYP++PP VRFQSRINM CVNPE G+V+
Subjt:  MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVE

Query:  RNLLPMLAKWQREYTMEDILTQLKKEMMSSQNRKLAQPPEGNEEGRTEQKGLVLKCCIL
         +  PML+ W+RE+TMED+L QLKKEMMSSQNRKLAQP EGNEEGRT+ KGLV+KCC++
Subjt:  RNLLPMLAKWQREYTMEDILTQLKKEMMSSQNRKLAQPPEGNEEGRTEQKGLVLKCCIL

Q9SJ44 Ubiquitin-conjugating enzyme E2 variant 1C7.9e-6180.29Show/hide
Query:  GSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVERNLL
        GS VVVPRNFRLLEELERGEKGIGDGTVSYGMDD DD+ M+SWTGTIIGP NTVHEGRIYQLKLFC KDYP+ PP VRF SRINMTCVN +TG+V+    
Subjt:  GSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVERNLL

Query:  PMLAKWQREYTMEDILTQLKKEMMSSQNRKLAQPPEG
         +LA WQR+YTMEDILTQLKKEM +S NRKL QPPEG
Subjt:  PMLAKWQREYTMEDILTQLKKEMMSSQNRKLAQPPEG

Q9SVD7 Ubiquitin-conjugating enzyme E2 variant 1D1.6e-6178.72Show/hide
Query:  MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVE
        +GS GS VVVPRNFRLLEELERGEKGIGDGTVSYGMDD DD+ M+SWTGTIIGP NTVHEGRIYQLKLFC KDYP+ PP VRF SR+NM CVN ETG+V+
Subjt:  MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVE

Query:  RNLLPMLAKWQREYTMEDILTQLKKEMMSSQNRKLAQPPEG
             +LA WQREYTMEDIL QLKKEM +S NRKL QPPEG
Subjt:  RNLLPMLAKWQREYTMEDILTQLKKEMMSSQNRKLAQPPEG

Arabidopsis top hitse value%identityAlignment
AT1G23260.1 MMS ZWEI homologue 13.0e-7176.1Show/hide
Query:  MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVE
        M SE ++VVVPRNFRLLEELERGEKGIGDGTVSYGMDD DD+ MQSWTGTI+GPPNT +EG+I+QLKLFCGK+YP++PP VRFQ+RINM CVNPETG+VE
Subjt:  MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVE

Query:  RNLLPMLAKWQREYTMEDILTQLKKEMMSSQNRKLAQPPEGNEEGRTEQKGLVLKCCIL
         +L PML  W+REYTMEDIL +LKKEMM+S NRKLAQPPEGNEE R + KG   KCC++
Subjt:  RNLLPMLAKWQREYTMEDILTQLKKEMMSSQNRKLAQPPEGNEEGRTEQKGLVLKCCIL

AT1G70650.2 Ran BP2/NZF zinc finger-like superfamily protein3.9e-7177.27Show/hide
Query:  SRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVERNLLP
        + ++VPRNFRLLEELERGEKGIGDGTVSYGMDD DD+LMQSWTGTI+GP NT +EG+I+QLKLFCGKDYP++PP VRFQSRINM CVNPE G+V+ +  P
Subjt:  SRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVERNLLP

Query:  MLAKWQREYTMEDILTQLKKEMMSSQNRKLAQPPEGNEEGRTEQKGLVLKCCIL
        ML+ W+RE+TMED+L QLKKEMMSSQNRKLAQP EGNEEGRT+ KGLV+KCC++
Subjt:  MLAKWQREYTMEDILTQLKKEMMSSQNRKLAQPPEGNEEGRTEQKGLVLKCCIL

AT1G70660.1 MMS ZWEI homologue 24.9e-7478.62Show/hide
Query:  MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVE
        MGSE  +VVVPRNFRLLEELERGEKGIGDGTVSYGMDD DD+LMQSWTGTI+GP NT +EG+I+QLKLFCGKDYP++PP VRFQSRINM CVNPE G+V+
Subjt:  MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVE

Query:  RNLLPMLAKWQREYTMEDILTQLKKEMMSSQNRKLAQPPEGNEEGRTEQKGLVLKCCIL
         +  PML+ W+RE+TMED+L QLKKEMMSSQNRKLAQP EGNEEGRT+ KGLV+KCC++
Subjt:  RNLLPMLAKWQREYTMEDILTQLKKEMMSSQNRKLAQPPEGNEEGRTEQKGLVLKCCIL

AT1G70660.2 MMS ZWEI homologue 22.9e-6679.86Show/hide
Query:  MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVE
        MGSE  +VVVPRNFRLLEELERGEKGIGDGTVSYGMDD DD+LMQSWTGTI+GP NT +EG+I+QLKLFCGKDYP++PP VRFQSRINM CVNPE G+V+
Subjt:  MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVE

Query:  RNLLPMLAKWQREYTMEDILTQLKKEMMSSQNRKLAQPPEGNEE
         +  PML+ W+RE+TMED+L QLKKEMMSSQNRKLAQP EGNEE
Subjt:  RNLLPMLAKWQREYTMEDILTQLKKEMMSSQNRKLAQPPEGNEE

AT3G52560.1 ubiquitin E2 variant 1D-41.1e-6278.72Show/hide
Query:  MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVE
        +GS GS VVVPRNFRLLEELERGEKGIGDGTVSYGMDD DD+ M+SWTGTIIGP NTVHEGRIYQLKLFC KDYP+ PP VRF SR+NM CVN ETG+V+
Subjt:  MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVE

Query:  RNLLPMLAKWQREYTMEDILTQLKKEMMSSQNRKLAQPPEG
             +LA WQREYTMEDIL QLKKEM +S NRKL QPPEG
Subjt:  RNLLPMLAKWQREYTMEDILTQLKKEMMSSQNRKLAQPPEG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCTCTGAAGGATCCAGGGTGGTTGTTCCTAGGAATTTTAGATTATTGGAAGAGCTCGAGCGAGGTGAAAAGGGGATTGGGGATGGAACTGTCAGCTATGGCATGGA
TGATCCAGATGATTTGCTCATGCAATCTTGGACTGGTACCATTATAGGTCCACCTAATACTGTTCATGAAGGGCGAATCTACCAATTGAAACTATTTTGTGGAAAGGATT
ATCCAGATAATCCACCAGCCGTCAGATTCCAAAGTAGGATAAACATGACATGTGTCAATCCCGAAACTGGAATGGTTGAAAGGAACCTCCTTCCCATGCTTGCAAAATGG
CAAAGGGAATACACAATGGAGGATATATTAACTCAATTGAAGAAAGAAATGATGTCCTCACAAAATAGGAAGCTGGCTCAGCCTCCTGAAGGGAACGAAGAGGGAAGGAC
AGAACAAAAGGGGCTAGTCCTGAAATGTTGCATTCTTTGA
mRNA sequenceShow/hide mRNA sequence
GCCGCTTGGGCTTAATATCACTACTCACCCGTTTCTCAAACCCAACTCTTTTACTTTCTCCATCTCTCTCTCCTCCCTCTTTCTTAATTCTTTCGTTCATCTAGAAACTT
TCTAAACCTCTCTCTCTCTCTCTCTCTCTCTCTGTTATTCTATGCTTCATGGGCTCTGAAGGATCCAGGGTGGTTGTTCCTAGGAATTTTAGATTATTGGAAGAGCTCGA
GCGAGGTGAAAAGGGGATTGGGGATGGAACTGTCAGCTATGGCATGGATGATCCAGATGATTTGCTCATGCAATCTTGGACTGGTACCATTATAGGTCCACCTAATACTG
TTCATGAAGGGCGAATCTACCAATTGAAACTATTTTGTGGAAAGGATTATCCAGATAATCCACCAGCCGTCAGATTCCAAAGTAGGATAAACATGACATGTGTCAATCCC
GAAACTGGAATGGTTGAAAGGAACCTCCTTCCCATGCTTGCAAAATGGCAAAGGGAATACACAATGGAGGATATATTAACTCAATTGAAGAAAGAAATGATGTCCTCACA
AAATAGGAAGCTGGCTCAGCCTCCTGAAGGGAACGAAGAGGGAAGGACAGAACAAAAGGGGCTAGTCCTGAAATGTTGCATTCTTTGATTCGGGTGAGAATTTGTTTCCC
GAAAAAGTTTAGGGACTAAATTTGTGATAAGACCGAGCTATTACAATAATATCATAAGCTGAACTCGTGCAGATTTTGGGCGTACAGGGAGAATAAGATTGGTGAATGCT
GAAGGCTTCTAAGATAGTTTAGCAATTTGAATTTGGCAAGCTCCCAATAAGGAGCTTAGTTTTCTGAAGTAAATGATGTGTGTTATGTAAGGATGAAGCTTTGAAGATGG
ATATTCTCAGTGTAAATGAATTCTTCTATATCATCAACGTTTAAGCTATAAATGTACTTAAAATATATGAGTTTGGTTATGGGTTTTTTACCAAATGAACAACAAACCAT
AAGTACGCATTGATATTGTTATATTAAAATTCGAAGCGTATGATATCCCATTTGCATATCGACACTCGAACCATATTGGTCAAGTCATTTCG
Protein sequenceShow/hide protein sequence
MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVERNLLPMLAKW
QREYTMEDILTQLKKEMMSSQNRKLAQPPEGNEEGRTEQKGLVLKCCIL