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Carg00146 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg00146
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionB box-type domain-containing protein
Genome locationCarg_Chr04:5596049..5597484
RNA-Seq ExpressionCarg00146
SyntenyCarg00146
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600856.1 hypothetical protein SDJN03_06089, partial [Cucurbita argyrosperma subsp. sororia]4.6e-7982.26Show/hide
Query:  MFVYQTRGTNIVNNTVSIFSLIFVFLFVLPPVAELNPIYPLLLLRSCTGFSRSVRSPIGRICYNY------QMETDCLDTLLNTKFFTPCNLHPSLQTYK
        MFVYQTRGTNIVNNTVSIFSLIFVFLFVLPPVAELNPIYPLLLLRSCTGFSRSVRSPIGRICYNY      QMETDCLDTLLNTKFFTPCNLHPSLQTYK
Subjt:  MFVYQTRGTNIVNNTVSIFSLIFVFLFVLPPVAELNPIYPLLLLRSCTGFSRSVRSPIGRICYNY------QMETDCLDTLLNTKFFTPCNLHPSLQTYK

Query:  FCIDCSVSFCTNCTVRNLHG---------------------------QSYRVNGEIAVHLNSPGQPVDTKSPKRKFGHFCEDCGRS
        FCIDCSVSFCTNCTVRNLHG                           QSYRVNGEIAVHLNSPGQPVDTKSPKRKFGHFCEDCGRS
Subjt:  FCIDCSVSFCTNCTVRNLHG---------------------------QSYRVNGEIAVHLNSPGQPVDTKSPKRKFGHFCEDCGRS

KAG7031491.1 hypothetical protein SDJN02_05531, partial [Cucurbita argyrosperma subsp. argyrosperma]1.9e-85100Show/hide
Query:  MFVYQTRGTNIVNNTVSIFSLIFVFLFVLPPVAELNPIYPLLLLRSCTGFSRSVRSPIGRICYNYQMETDCLDTLLNTKFFTPCNLHPSLQTYKFCIDCS
        MFVYQTRGTNIVNNTVSIFSLIFVFLFVLPPVAELNPIYPLLLLRSCTGFSRSVRSPIGRICYNYQMETDCLDTLLNTKFFTPCNLHPSLQTYKFCIDCS
Subjt:  MFVYQTRGTNIVNNTVSIFSLIFVFLFVLPPVAELNPIYPLLLLRSCTGFSRSVRSPIGRICYNYQMETDCLDTLLNTKFFTPCNLHPSLQTYKFCIDCS

Query:  VSFCTNCTVRNLHGQSYRVNGEIAVHLNSPGQPVDTKSPKRKFGHFCEDCGRS
        VSFCTNCTVRNLHGQSYRVNGEIAVHLNSPGQPVDTKSPKRKFGHFCEDCGRS
Subjt:  VSFCTNCTVRNLHGQSYRVNGEIAVHLNSPGQPVDTKSPKRKFGHFCEDCGRS

XP_023537392.1 uncharacterized protein LOC111798456 isoform X2 [Cucurbita pepo subsp. pepo]3.3e-5389.26Show/hide
Query:  MFVYQTRGTNIVNNTVSIFSLIFVFLFVLPPVAELNPIYPLLLLRSCTGFSRSVRSPIGRICYNY------QMETDCLDTLLNTKFFTPCNLHPSLQTYK
        MFVYQTRGTNIV NTVSIFSLIFVFL VLPPVAELNPIYPLLLLRSCTG S SVRSPIGRICYNY      QMETDCLDTLLNTKFFTPCNLHPSLQTYK
Subjt:  MFVYQTRGTNIVNNTVSIFSLIFVFLFVLPPVAELNPIYPLLLLRSCTGFSRSVRSPIGRICYNY------QMETDCLDTLLNTKFFTPCNLHPSLQTYK

Query:  FCIDCSVSFCTNCTVRNLHGQ
        FCIDCSVSFCTNCTV N H Q
Subjt:  FCIDCSVSFCTNCTVRNLHGQ

XP_023537410.1 uncharacterized protein LOC111798456 isoform X4 [Cucurbita pepo subsp. pepo]3.4e-5083.08Show/hide
Query:  MFVYQTRGTNIVNNTVSIFSLIFVFLFVLPPVAELNPIYPLLLLRSCTGFSRSVRSPIGRI---C----YNY------QMETDCLDTLLNTKFFTPCNLH
        MFVYQTRGTNIV NTVSIFSLIFVFL VLPPVAELNPIYPLLLLRSCTG S SVRSPIGRI   C    YNY      QMETDCLDTLLNTKFFTPCNLH
Subjt:  MFVYQTRGTNIVNNTVSIFSLIFVFLFVLPPVAELNPIYPLLLLRSCTGFSRSVRSPIGRI---C----YNY------QMETDCLDTLLNTKFFTPCNLH

Query:  PSLQTYKFCIDCSVSFCTNCTVRNLHGQSY
        PSLQTYKFCIDCSVSFCTNCTV N H Q +
Subjt:  PSLQTYKFCIDCSVSFCTNCTVRNLHGQSY

XP_023537426.1 uncharacterized protein LOC111798456 isoform X6 [Cucurbita pepo subsp. pepo]6.9e-5183.21Show/hide
Query:  MFVYQTRGTNIVNNTVSIFSLIFVFLFVLPPVAELNPIYPLLLLRSCTGFSRSVRSPIGRI---C----YNY------QMETDCLDTLLNTKFFTPCNLH
        MFVYQTRGTNIV NTVSIFSLIFVFL VLPPVAELNPIYPLLLLRSCTG S SVRSPIGRI   C    YNY      QMETDCLDTLLNTKFFTPCNLH
Subjt:  MFVYQTRGTNIVNNTVSIFSLIFVFLFVLPPVAELNPIYPLLLLRSCTGFSRSVRSPIGRI---C----YNY------QMETDCLDTLLNTKFFTPCNLH

Query:  PSLQTYKFCIDCSVSFCTNCTVRNLHGQSYR
        PSLQTYKFCIDCSVSFCTNCTV N H Q +R
Subjt:  PSLQTYKFCIDCSVSFCTNCTVRNLHGQSYR

TrEMBL top hitse value%identityAlignment
A0A0A0KL89 Uncharacterized protein4.7e-2148.28Show/hide
Query:  METDCLDTLLNTKFFTPCNLHPSL---QTYKFCIDCSVSFCTNCTVRNLHGQ---------------------------SYRVNGEIAVHLNSPGQPVDT
        ME++ L TLLNTKF+T C+LHP+L   +  +FCIDCSVSFC NCT+ +LH Q                            Y+VNG++AVH+NS GQ VDT
Subjt:  METDCLDTLLNTKFFTPCNLHPSL---QTYKFCIDCSVSFCTNCTVRNLHGQ---------------------------SYRVNGEIAVHLNSPGQPVDT

Query:  KSPKRKFGHFCEDCGR
        KSPKRK  + CE+CG+
Subjt:  KSPKRKFGHFCEDCGR

A0A6J1D096 uncharacterized protein LOC111015876 isoform X11.2e-2150.86Show/hide
Query:  METDCLDTLLNTKFFTPCNLHPSL---QTYKFCIDCSVSFCTNCTVRNLHGQ---------------------------SYRVNGEIAVHLNSPGQPVDT
        METD + TLLNTKFFT C+LHP+L   +  KFCIDCS+SFC NC V +LH Q                           +Y+VNGE++VHLNS  Q VDT
Subjt:  METDCLDTLLNTKFFTPCNLHPSL---QTYKFCIDCSVSFCTNCTVRNLHGQ---------------------------SYRVNGEIAVHLNSPGQPVDT

Query:  KSPKRKFGHFCEDCGR
        KSPK K    CEDCGR
Subjt:  KSPKRKFGHFCEDCGR

A0A6J1D0E9 uncharacterized protein LOC111015876 isoform X24.8e-2666.29Show/hide
Query:  METDCLDTLLNTKFFTPCNLHPSL---QTYKFCIDCSVSFCTNCTVRNLHGQSYRVNGEIAVHLNSPGQPVDTKSPKRKFGHFCEDCGR
        METD + TLLNTKFFT C+LHP+L   +  KFCIDCS+SFC NC V +LH Q+Y+VNGE++VHLNS  Q VDTKSPK K    CEDCGR
Subjt:  METDCLDTLLNTKFFTPCNLHPSL---QTYKFCIDCSVSFCTNCTVRNLHGQSYRVNGEIAVHLNSPGQPVDTKSPKRKFGHFCEDCGR

A0A6J1FR06 uncharacterized protein LOC1114476626.5e-2353.45Show/hide
Query:  METDCLDTLLNTKFFTPCNLHPSL---QTYKFCIDCSVSFCTNCTVRNLHGQ---------------------------SYRVNGEIAVHLNSPGQPVDT
        METD L TLLNTKFF  C+LHP+L   +  KFCIDCSVSFC NCTV +LH Q                           +Y+VNGEI+VHLNS GQ VD 
Subjt:  METDCLDTLLNTKFFTPCNLHPSL---QTYKFCIDCSVSFCTNCTVRNLHGQ---------------------------SYRVNGEIAVHLNSPGQPVDT

Query:  KSPKRKFGHFCEDCGR
        K PK K G  CEDCGR
Subjt:  KSPKRKFGHFCEDCGR

A0A6J1K8W8 uncharacterized protein LOC1114917316.5e-2353.45Show/hide
Query:  METDCLDTLLNTKFFTPCNLHPSL---QTYKFCIDCSVSFCTNCTVRNLHGQ---------------------------SYRVNGEIAVHLNSPGQPVDT
        METD L TLLNTKFF  C+LHP+L   +  KFCIDCSVSFC NCTV +LH Q                           +Y+VNGEI+VHLNS GQ VD 
Subjt:  METDCLDTLLNTKFFTPCNLHPSL---QTYKFCIDCSVSFCTNCTVRNLHGQ---------------------------SYRVNGEIAVHLNSPGQPVDT

Query:  KSPKRKFGHFCEDCGR
        K PK K G  CEDCGR
Subjt:  KSPKRKFGHFCEDCGR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G01818.1 PLATZ transcription factor family protein4.5e-0833.33Show/hide
Query:  LDTLLNTKFFTPCNLHPSLQTYK---FCIDCSVSFCTNC--TVRNLHG------------------------------QSYRVNGEIAVHLNSPGQPVDT
        ++TLLN++FF  C  H  L+  +   FCIDC+V  C +C  TV + H                               Q+Y++NGE A+HLNS  Q  D 
Subjt:  LDTLLNTKFFTPCNLHPSLQTYK---FCIDCSVSFCTNC--TVRNLHG------------------------------QSYRVNGEIAVHLNSPGQPVDT

Query:  K-SPKRKFGHFCEDCGR
        + S K K G  C  C R
Subjt:  K-SPKRKFGHFCEDCGR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCGTTTATCAAACAAGAGGAACGAATATCGTAAACAATACTGTTTCCATTTTCAGTTTAATCTTCGTCTTTCTTTTCGTTCTTCCTCCAGTTGCAGAGCTTAATCC
AATTTATCCGCTGCTTCTTCTGCGTTCTTGTACTGGTTTCAGTCGTTCTGTTCGCTCTCCAATCGGAAGAATCTGTTATAATTATCAAATGGAAACGGACTGTCTTGATA
CGCTTTTGAATACAAAATTCTTCACTCCTTGCAATCTTCATCCTAGTCTCCAGACATATAAATTCTGCATTGATTGTAGTGTTAGCTTCTGCACGAATTGTACAGTCCGT
AATCTTCATGGGCAGTCATATCGAGTCAATGGTGAAATAGCTGTTCATCTAAACTCCCCTGGTCAACCCGTCGACACCAAATCACCAAAGCGGAAGTTTGGTCATTTTTG
TGAAGATTGTGGCAGAAGT
mRNA sequenceShow/hide mRNA sequence
CAAAAGATGTTCGTTTATCAAACAAGAGGAACGAATATCGTAAACAATACTGTTTCCATTTTCAGTTTAATCTTCGTCTTTCTTTTCGTTCTTCCTCCAGTTGCAGAGCT
TAATCCAATTTATCCGCTGCTTCTTCTGCGTTCTTGTACTGGTTTCAGTCGTTCTGTTCGCTCTCCAATCGGAAGAATCTGTTATAATTATCAAATGGAAACGGACTGTC
TTGATACGCTTTTGAATACAAAATTCTTCACTCCTTGCAATCTTCATCCTAGTCTCCAGACATATAAATTCTGCATTGATTGTAGTGTTAGCTTCTGCACGAATTGTACA
GTCCGTAATCTTCATGGGCAGTCATATCGAGTCAATGGTGAAATAGCTGTTCATCTAAACTCCCCTGGTCAACCCGTCGACACCAAATCACCAAAGCGGAAGTTTGGTCA
TTTTTGTGAAGATTGTGGCAGAAGT
Protein sequenceShow/hide protein sequence
MFVYQTRGTNIVNNTVSIFSLIFVFLFVLPPVAELNPIYPLLLLRSCTGFSRSVRSPIGRICYNYQMETDCLDTLLNTKFFTPCNLHPSLQTYKFCIDCSVSFCTNCTVR
NLHGQSYRVNGEIAVHLNSPGQPVDTKSPKRKFGHFCEDCGRS