; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg00147 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg00147
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionbinding partner of ACD11 1-like
Genome locationCarg_Chr04:5598676..5601287
RNA-Seq ExpressionCarg00147
SyntenyCarg00147
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022942419.1 binding partner of ACD11 1-like isoform X1 [Cucurbita moschata]2.0e-14199.28Show/hide
Query:  MSMRTVKVSNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGDLFVSITLVENYHLPPEAMSSILDKRKTATGIA
        MSMRTVKVSNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGDLFVSITLVENYHLPPEAMSSILDKRKTAT IA
Subjt:  MSMRTVKVSNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGDLFVSITLVENYHLPPEAMSSILDKRKTATGIA

Query:  PNQAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKASNAGTALMS
        P+QAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKASNAGTALMS
Subjt:  PNQAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKASNAGTALMS

Query:  NYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESIYHERTGIINNFAEFHLDEPLPGEPAIVPVNSADR
        NYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESIYHERTGIINNFAEFHLDEPLPGEPAIVPVNSADR
Subjt:  NYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESIYHERTGIINNFAEFHLDEPLPGEPAIVPVNSADR

XP_022942420.1 binding partner of ACD11 1-like isoform X2 [Cucurbita moschata]1.7e-14099.28Show/hide
Query:  MRTVKVSNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGDLFVSITLVENYHLPPEAMSSILDKRKTATGIAPN
        MRTVKVSNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGDLFVSITLVENYHLPPEAMSSILDKRKTAT IAP+
Subjt:  MRTVKVSNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGDLFVSITLVENYHLPPEAMSSILDKRKTATGIAPN

Query:  QAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKASNAGTALMSNY
        QAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKASNAGTALMSNY
Subjt:  QAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKASNAGTALMSNY

Query:  YVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESIYHERTGIINNFAEFHLDEPLPGEPAIVPVNSADR
        YVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESIYHERTGIINNFAEFHLDEPLPGEPAIVPVNSADR
Subjt:  YVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESIYHERTGIINNFAEFHLDEPLPGEPAIVPVNSADR

XP_022990263.1 binding partner of ACD11 1-like [Cucurbita maxima]6.2e-143100Show/hide
Query:  MSMRTVKVSNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGDLFVSITLVENYHLPPEAMSSILDKRKTATGIA
        MSMRTVKVSNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGDLFVSITLVENYHLPPEAMSSILDKRKTATGIA
Subjt:  MSMRTVKVSNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGDLFVSITLVENYHLPPEAMSSILDKRKTATGIA

Query:  PNQAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKASNAGTALMS
        PNQAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKASNAGTALMS
Subjt:  PNQAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKASNAGTALMS

Query:  NYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESIYHERTGIINNFAEFHLDEPLPGEPAIVPVNSADR
        NYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESIYHERTGIINNFAEFHLDEPLPGEPAIVPVNSADR
Subjt:  NYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESIYHERTGIINNFAEFHLDEPLPGEPAIVPVNSADR

XP_023537354.1 binding partner of ACD11 1-like isoform X1 [Cucurbita pepo subsp. pepo]1.4e-14299.64Show/hide
Query:  MSMRTVKVSNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGDLFVSITLVENYHLPPEAMSSILDKRKTATGIA
        MSMRTVKVSNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGDLFVSITLVENYHLPPEAMSSILDKRKTATGIA
Subjt:  MSMRTVKVSNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGDLFVSITLVENYHLPPEAMSSILDKRKTATGIA

Query:  PNQAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKASNAGTALMS
        PNQAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKASNAGTALMS
Subjt:  PNQAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKASNAGTALMS

Query:  NYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESIYHERTGIINNFAEFHLDEPLPGEPAIVPVNSADR
        NYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKA+EEKEESIYHERTGIINNFAEFHLDEPLPGEPAIVPVNSADR
Subjt:  NYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESIYHERTGIINNFAEFHLDEPLPGEPAIVPVNSADR

XP_023537363.1 binding partner of ACD11 1-like isoform X2 [Cucurbita pepo subsp. pepo]1.2e-14199.64Show/hide
Query:  MRTVKVSNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGDLFVSITLVENYHLPPEAMSSILDKRKTATGIAPN
        MRTVKVSNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGDLFVSITLVENYHLPPEAMSSILDKRKTATGIAPN
Subjt:  MRTVKVSNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGDLFVSITLVENYHLPPEAMSSILDKRKTATGIAPN

Query:  QAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKASNAGTALMSNY
        QAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKASNAGTALMSNY
Subjt:  QAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKASNAGTALMSNY

Query:  YVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESIYHERTGIINNFAEFHLDEPLPGEPAIVPVNSADR
        YVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKA+EEKEESIYHERTGIINNFAEFHLDEPLPGEPAIVPVNSADR
Subjt:  YVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESIYHERTGIINNFAEFHLDEPLPGEPAIVPVNSADR

TrEMBL top hitse value%identityAlignment
A0A0A0KIR7 RRM domain-containing protein5.7e-13493.88Show/hide
Query:  MSMRTVKVSNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGDLFVSITLVENYHLPPEAMSSILDKRKTATGIA
        MSMRTVKVSNISK TSERDIKEF SFSG+ILYVEMQRE+ENTQVAYVTY+DSQGADTAILLTGAKIGDL V+ITLVENYHLPPEAMSSILDKR+T TGIA
Subjt:  MSMRTVKVSNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGDLFVSITLVENYHLPPEAMSSILDKRKTATGIA

Query:  PNQAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKASNAGTALMS
        PNQAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQV EKTKSALAVAEQKA++AGTALMS
Subjt:  PNQAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKASNAGTALMS

Query:  NYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESIYHERTGIINNFAEFHLDEPLPGEPAIVPVNSADR
        NYYVLTGAAWFSNAVTAVTKAAEEVTQMTK KVEKAEEEK+ESIY ERTGII+NFAE HLDEPLPGEPAIVPVNSADR
Subjt:  NYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESIYHERTGIINNFAEFHLDEPLPGEPAIVPVNSADR

A0A1S3BUX7 binding partner of ACD11 1-like isoform X13.3e-13493.88Show/hide
Query:  MSMRTVKVSNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGDLFVSITLVENYHLPPEAMSSILDKRKTATGIA
        MSMRTVKVSNISK TSERDIKEF SFSG+ILYVEMQRE+ENTQVAYVTY+DSQGADTAILLTGAKIGDL V+ITLVENYHLPPEAMSSILDKR+T TGIA
Subjt:  MSMRTVKVSNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGDLFVSITLVENYHLPPEAMSSILDKRKTATGIA

Query:  PNQAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKASNAGTALMS
        PNQAEDVVSTMLAKGFILGKDALNKAKAFDERLQ TSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKA++AGTALMS
Subjt:  PNQAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKASNAGTALMS

Query:  NYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESIYHERTGIINNFAEFHLDEPLPGEPAIVPVNSADR
        NYYVLTGAAWFSNAVTAVTKAAEEVTQMTK KVEKAEEEK+ESIY ERTGII+NFAE HLDEPLPGEPAIVPVNSADR
Subjt:  NYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESIYHERTGIINNFAEFHLDEPLPGEPAIVPVNSADR

A0A6J1FNT8 binding partner of ACD11 1-like isoform X28.2e-14199.28Show/hide
Query:  MRTVKVSNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGDLFVSITLVENYHLPPEAMSSILDKRKTATGIAPN
        MRTVKVSNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGDLFVSITLVENYHLPPEAMSSILDKRKTAT IAP+
Subjt:  MRTVKVSNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGDLFVSITLVENYHLPPEAMSSILDKRKTATGIAPN

Query:  QAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKASNAGTALMSNY
        QAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKASNAGTALMSNY
Subjt:  QAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKASNAGTALMSNY

Query:  YVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESIYHERTGIINNFAEFHLDEPLPGEPAIVPVNSADR
        YVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESIYHERTGIINNFAEFHLDEPLPGEPAIVPVNSADR
Subjt:  YVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESIYHERTGIINNFAEFHLDEPLPGEPAIVPVNSADR

A0A6J1FR87 binding partner of ACD11 1-like isoform X19.7e-14299.28Show/hide
Query:  MSMRTVKVSNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGDLFVSITLVENYHLPPEAMSSILDKRKTATGIA
        MSMRTVKVSNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGDLFVSITLVENYHLPPEAMSSILDKRKTAT IA
Subjt:  MSMRTVKVSNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGDLFVSITLVENYHLPPEAMSSILDKRKTATGIA

Query:  PNQAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKASNAGTALMS
        P+QAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKASNAGTALMS
Subjt:  PNQAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKASNAGTALMS

Query:  NYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESIYHERTGIINNFAEFHLDEPLPGEPAIVPVNSADR
        NYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESIYHERTGIINNFAEFHLDEPLPGEPAIVPVNSADR
Subjt:  NYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESIYHERTGIINNFAEFHLDEPLPGEPAIVPVNSADR

A0A6J1JSR7 binding partner of ACD11 1-like3.0e-143100Show/hide
Query:  MSMRTVKVSNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGDLFVSITLVENYHLPPEAMSSILDKRKTATGIA
        MSMRTVKVSNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGDLFVSITLVENYHLPPEAMSSILDKRKTATGIA
Subjt:  MSMRTVKVSNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGDLFVSITLVENYHLPPEAMSSILDKRKTATGIA

Query:  PNQAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKASNAGTALMS
        PNQAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKASNAGTALMS
Subjt:  PNQAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKASNAGTALMS

Query:  NYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESIYHERTGIINNFAEFHLDEPLPGEPAIVPVNSADR
        NYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESIYHERTGIINNFAEFHLDEPLPGEPAIVPVNSADR
Subjt:  NYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESIYHERTGIINNFAEFHLDEPLPGEPAIVPVNSADR

SwissProt top hitse value%identityAlignment
P87216 Protein vip11.7e-0526.57Show/hide
Query:  VKVSNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGDLFVSITLVENYHLPPEAMSSILDKRKTATGIAPNQAE
        V V+NIS   +E+ I +F SF G++  +  ++  E TQ A + +E      TA+LL  A +G   + IT  +         +S  D+       A  Q +
Subjt:  VKVSNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGDLFVSITLVENYHLPPEAMSSILDKRKTATGIAPNQAE

Query:  D----VVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVN------EKVREMDEMFQVTEK---TKSALAVAEQKA-
             ++S +L++G+ L    L K+   D+   ++S          +  GI E   +G   VN      EK  E+D  F +++K   T S ++    KA 
Subjt:  D----VVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVN------EKVREMDEMFQVTEK---TKSALAVAEQKA-

Query:  -SNAGTA
         + AGT+
Subjt:  -SNAGTA

Q9LFD5 Binding partner of ACD11 16.6e-5552.59Show/hide
Query:  MRTVKVSNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGDLFVSITLVENYHLPPEAMSSILDKRKTATGIAPN
        +R+VKV N+S   +E DIKEF SFSG++  +++Q    N   AYVT++++QGA+TA+LL+GA I D  V I L  NY  PP A  +  + + +       
Subjt:  MRTVKVSNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGDLFVSITLVENYHLPPEAMSSILDKRKTATGIAPN

Query:  QAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKASNAGTALMSNY
        +AEDVVS+MLAKGFILGKDA+ KAKAFDE+   TS A+A VAS+D+K+G+++K+TAGT++VNEK++ +D+ FQVTE+TKS  A AEQ  S+AG+A+M N 
Subjt:  QAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKASNAGTALMSNY

Query:  YVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVE
        YVLTG +W + A   V +AA EV Q TK KVE
Subjt:  YVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVE

Arabidopsis top hitse value%identityAlignment
AT1G67950.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.6e-6754.61Show/hide
Query:  MRTVKVSNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGDLFVSITLVENYHLPPEAMSSILDKRKTATGIAPN
        ++TVK+SN+S   S++D+KEF SFSG I YVEM+ ET+ +QVAYVT++DSQGA+TA+LLTGA I DL VSIT   NY LPPEA++  LD   +  G +  
Subjt:  MRTVKVSNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGDLFVSITLVENYHLPPEAMSSILDKRKTATGIAPN

Query:  QAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKASNAGTALMSNY
        +AEDVV+ M+ +G+ LGKDA+ KAKAFD+R  L SNASAT+AS+D KMG++EK++ GT VVNEK+R++DE +QV E TKSALA AE+ A +A TALM+N 
Subjt:  QAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKASNAGTALMSNY

Query:  YVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESIYHERTGIINNFAEFHLDEPLPGEPAIVPV
        YV +GA+WFSNA  AVTKA +E       KVE   E ++E I               LD   P  PA+VPV
Subjt:  YVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESIYHERTGIINNFAEFHLDEPLPGEPAIVPV

AT1G67950.2 RNA-binding (RRM/RBD/RNP motifs) family protein1.6e-6754.61Show/hide
Query:  MRTVKVSNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGDLFVSITLVENYHLPPEAMSSILDKRKTATGIAPN
        ++TVK+SN+S   S++D+KEF SFSG I YVEM+ ET+ +QVAYVT++DSQGA+TA+LLTGA I DL VSIT   NY LPPEA++  LD   +  G +  
Subjt:  MRTVKVSNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGDLFVSITLVENYHLPPEAMSSILDKRKTATGIAPN

Query:  QAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKASNAGTALMSNY
        +AEDVV+ M+ +G+ LGKDA+ KAKAFD+R  L SNASAT+AS+D KMG++EK++ GT VVNEK+R++DE +QV E TKSALA AE+ A +A TALM+N 
Subjt:  QAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKASNAGTALMSNY

Query:  YVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESIYHERTGIINNFAEFHLDEPLPGEPAIVPV
        YV +GA+WFSNA  AVTKA +E       KVE   E ++E I               LD   P  PA+VPV
Subjt:  YVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESIYHERTGIINNFAEFHLDEPLPGEPAIVPV

AT1G67950.3 RNA-binding (RRM/RBD/RNP motifs) family protein1.7e-6654.41Show/hide
Query:  MRTVKVSNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGDLFVSITLVENYHLPPEAMSSILDKRK-TATGIAP
        ++TVK+SN+S   S++D+KEF SFSG I YVEM+ ET+ +QVAYVT++DSQGA+TA+LLTGA I DL VSIT   NY LPPEA++  LD ++ +  G + 
Subjt:  MRTVKVSNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGDLFVSITLVENYHLPPEAMSSILDKRK-TATGIAP

Query:  NQAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKASNAGTALMSN
         +AEDVV+ M+ +G+ LGKDA+ KAKAFD+R  L SNASAT+AS+D KMG++EK++ GT VVNEK+R++DE +QV E TKSALA AE+ A +A TALM+N
Subjt:  NQAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKASNAGTALMSN

Query:  YYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESIYHERTGIINNFAEFHLDEPLPGEPAIVPV
         YV +GA+WFSNA  AVTKA +E       KVE   E ++E I               LD   P  PA+VPV
Subjt:  YYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESIYHERTGIINNFAEFHLDEPLPGEPAIVPV

AT4G17720.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.3e-6955.64Show/hide
Query:  MSMRTVKVSNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGDLFVSITLVENYHLPPEAMSSI----LDKRKTA
        M+M TVKVSN+S   ++RD+KEF SFSG ILY+E Q ETE T++AYVT++D QGA+TA+LL+GA I D  V +++  +Y L PEA++S+     +K   A
Subjt:  MSMRTVKVSNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGDLFVSITLVENYHLPPEAMSSI----LDKRKTA

Query:  TGIAPNQAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKASNAGT
              +AEDVVS+MLAKGFILGKDA+ KAK+ DE+ QLTS ASA VAS D+K+G T+KI  GT VV EKVRE+D+ +QV+EKTKSA+A AEQ  SNAG+
Subjt:  TGIAPNQAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKASNAGT

Query:  ALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESIYHERTGIINNFAEFHLDE
        A+M N YVLTGA W + A   V KAAEEV Q  K KV  AEEE       ++  +++ FA  HL E
Subjt:  ALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESIYHERTGIINNFAEFHLDE

AT5G46870.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.1e-6853.7Show/hide
Query:  MSMRTVKVSNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGDLFVSITLVENYHLPPEAMSSILDKRKTATGIA
        MSM TVKVSN+S   +ERD+KEF SFSG I Y+E Q E + +++AYVT++D QGA+TA+LLTG+ I D  V++T+  +Y LPP+A++SI   +++    +
Subjt:  MSMRTVKVSNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGDLFVSITLVENYHLPPEAMSSILDKRKTATGIA

Query:  P--------NQAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKAS
        P         +AEDVVS M++KGF+LGKDA+ KAK+ DE+ QLTS ASA V S D+++G TEKI  GT VV+EKV+E+D+ FQVTEKTKSA+A AEQ  S
Subjt:  P--------NQAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKAS

Query:  NAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESIYHERTGIINNFAEFHLDE
        NAG+A+M N YVLTGA W + A   V+KAAEEV Q  K KV  AEEE+E     E+  +++  A  HL E
Subjt:  NAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESIYHERTGIINNFAEFHLDE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGATGAGAACTGTCAAGGTCAGCAATATCTCAAAAGCTACTTCTGAGAGAGATATCAAAGAATTCCTTTCATTCTCTGGTCAAATCCTTTATGTTGAAATGCAAAG
AGAAACTGAAAATACTCAGGTTGCTTATGTTACATATGAGGATTCTCAAGGAGCAGATACTGCAATACTTTTGACTGGTGCAAAAATTGGTGATCTATTTGTATCAATTA
CTCTGGTTGAGAATTATCATCTTCCACCTGAAGCAATGTCATCAATCCTGGATAAAAGGAAAACTGCTACCGGGATTGCTCCGAATCAGGCTGAAGACGTTGTAAGTACA
ATGCTCGCGAAAGGCTTCATTTTGGGGAAGGATGCTCTGAACAAGGCAAAAGCGTTCGACGAACGACTCCAATTGACATCAAACGCTTCTGCAACTGTCGCTTCCATTGA
CCGGAAGATGGGTATAACTGAGAAAATAACTGCAGGCACAGCAGTGGTGAATGAAAAGGTCAGGGAGATGGATGAAATGTTCCAGGTTACGGAGAAGACGAAATCCGCTC
TAGCAGTTGCCGAGCAGAAGGCAAGCAACGCTGGAACCGCGCTCATGAGCAACTATTACGTGTTAACTGGAGCAGCTTGGTTTTCAAATGCTGTAACTGCAGTTACAAAA
GCTGCCGAGGAAGTGACCCAGATGACAAAGGCAAAAGTCGAGAAAGCCGAGGAGGAGAAAGAGGAGAGTATATACCACGAAAGAACCGGGATCATCAATAACTTCGCCGA
GTTCCATCTCGACGAGCCTTTACCGGGGGAGCCTGCTATTGTTCCAGTTAATTCAGCTGATAGATAG
mRNA sequenceShow/hide mRNA sequence
TACAAGAATTTCGTCTCTTCTCTTCTTCTCCTCTTCTCCCCGCCGCTTGATCTCATCAACCTATCATCTTCCGCTATCTCTAATTCCCTTCTCAACCATTCTTTTACCTT
TCAGAAATGTCGATGAGAACTGTCAAGGTCAGCAATATCTCAAAAGCTACTTCTGAGAGAGATATCAAAGAATTCCTTTCATTCTCTGGTCAAATCCTTTATGTTGAAAT
GCAAAGAGAAACTGAAAATACTCAGGTTGCTTATGTTACATATGAGGATTCTCAAGGAGCAGATACTGCAATACTTTTGACTGGTGCAAAAATTGGTGATCTATTTGTAT
CAATTACTCTGGTTGAGAATTATCATCTTCCACCTGAAGCAATGTCATCAATCCTGGATAAAAGGAAAACTGCTACCGGGATTGCTCCGAATCAGGCTGAAGACGTTGTA
AGTACAATGCTCGCGAAAGGCTTCATTTTGGGGAAGGATGCTCTGAACAAGGCAAAAGCGTTCGACGAACGACTCCAATTGACATCAAACGCTTCTGCAACTGTCGCTTC
CATTGACCGGAAGATGGGTATAACTGAGAAAATAACTGCAGGCACAGCAGTGGTGAATGAAAAGGTCAGGGAGATGGATGAAATGTTCCAGGTTACGGAGAAGACGAAAT
CCGCTCTAGCAGTTGCCGAGCAGAAGGCAAGCAACGCTGGAACCGCGCTCATGAGCAACTATTACGTGTTAACTGGAGCAGCTTGGTTTTCAAATGCTGTAACTGCAGTT
ACAAAAGCTGCCGAGGAAGTGACCCAGATGACAAAGGCAAAAGTCGAGAAAGCCGAGGAGGAGAAAGAGGAGAGTATATACCACGAAAGAACCGGGATCATCAATAACTT
CGCCGAGTTCCATCTCGACGAGCCTTTACCGGGGGAGCCTGCTATTGTTCCAGTTAATTCAGCTGATAGATAGACAGTAAGTTGTGAATCATACGCATGAAAACCTACAC
TTGTGAAATACATTGCTTTCCCCAATCAACTGTATGATATATACATTTTCATCTAGAGGTGCTCCAATTACAGGGTTTACTTCTTTATACACCTGCTCCTGTTGAAATGT
CATGACGTTCTTTTGAGTGAAAAATTCACTTTTTGAATACTTGATTATACAATGTTTCATTTAACTTCTATAATTCATAAATATACT
Protein sequenceShow/hide protein sequence
MSMRTVKVSNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGDLFVSITLVENYHLPPEAMSSILDKRKTATGIAPNQAEDVVST
MLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKASNAGTALMSNYYVLTGAAWFSNAVTAVTK
AAEEVTQMTKAKVEKAEEEKEESIYHERTGIINNFAEFHLDEPLPGEPAIVPVNSADR