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Carg00158 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg00158
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr04:5674384..5674830
RNA-Seq ExpressionCarg00158
SyntenyCarg00158
Gene Ontology termsGO:0009507 - chloroplast (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011655051.1 uncharacterized protein LOC105435471 [Cucumis sativus]1.6e-4975.54Show/hide
Query:  VSASLITPPPSPPFFHRSSTVVFHKLRPISAISPSWLCRR--VAAAAPRCVSQGGWGGS--VAEPEIEEWLKLGRLEEKCGGGGKGVVELLECLEREAIM
        +SASLI+PPP PP  HR ST  F  LRP  ++S  WLC R   A A PRCVSQGGWG S  V E +IEEWLKLGRLEEKCGGGGKG+VELLECLE+EAIM
Subjt:  VSASLITPPPSPPFFHRSSTVVFHKLRPISAISPSWLCRR--VAAAAPRCVSQGGWGGS--VAEPEIEEWLKLGRLEEKCGGGGKGVVELLECLEREAIM

Query:  GEDEGREPTDYNRRAKIFSTSSEVFQALKQHSDAAPDPP
        GEDEGR+PTDYNRRAKIFSTSSEVFQALKQHSDA   PP
Subjt:  GEDEGREPTDYNRRAKIFSTSSEVFQALKQHSDAAPDPP

XP_022942933.1 uncharacterized protein LOC111447817 [Cucurbita moschata]9.8e-79100Show/hide
Query:  MQVVSASLITPPPSPPFFHRSSTVVFHKLRPISAISPSWLCRRVAAAAPRCVSQGGWGGSVAEPEIEEWLKLGRLEEKCGGGGKGVVELLECLEREAIMG
        MQVVSASLITPPPSPPFFHRSSTVVFHKLRPISAISPSWLCRRVAAAAPRCVSQGGWGGSVAEPEIEEWLKLGRLEEKCGGGGKGVVELLECLEREAIMG
Subjt:  MQVVSASLITPPPSPPFFHRSSTVVFHKLRPISAISPSWLCRRVAAAAPRCVSQGGWGGSVAEPEIEEWLKLGRLEEKCGGGGKGVVELLECLEREAIMG

Query:  EDEGREPTDYNRRAKIFSTSSEVFQALKQHSDAAPDPPPGLNLDGSSQ
        EDEGREPTDYNRRAKIFSTSSEVFQALKQHSDAAPDPPPGLNLDGSSQ
Subjt:  EDEGREPTDYNRRAKIFSTSSEVFQALKQHSDAAPDPPPGLNLDGSSQ

XP_022988679.1 uncharacterized protein LOC111485933 [Cucurbita maxima]8.6e-6794.16Show/hide
Query:  MQVVSASLITPPPSPPFFHRSSTVVFHKLRPISAISPSWLCRRVAAAAPRCVSQGGWGGSVAEPEIEEWLKLGRLEEKCGGGGKGVVELLECLEREAIMG
        MQVVSASLI PPPSP FFHRSSTVVF K+RPISAISP W CRRVAAAAPRCVSQGGWGGSVAE EIEEWLKLGRL+EKCGGGGKGVVELLECLEREAIMG
Subjt:  MQVVSASLITPPPSPPFFHRSSTVVFHKLRPISAISPSWLCRRVAAAAPRCVSQGGWGGSVAEPEIEEWLKLGRLEEKCGGGGKGVVELLECLEREAIMG

Query:  EDEGREPTDYNRRAKIFSTSSEVFQALKQHSDAAPDP
        EDEGREPTDYNRRAKIFSTSSEVFQALKQHSDAAPDP
Subjt:  EDEGREPTDYNRRAKIFSTSSEVFQALKQHSDAAPDP

XP_023547061.1 uncharacterized protein LOC111805978 [Cucurbita pepo subsp. pepo]1.6e-6595.49Show/hide
Query:  SASLITPPPSPPFFHRSSTVVFHKLRPISAISPSWLCRRVAAAAPRCVSQGGWGGSVAEPEIEEWLKLGRLEEKCGGGGKGVVELLECLEREAIMGEDEG
        SASLI PPPSPPF HRSSTV F KLRPISAISP W CRRVAAAAPRCVSQGGWGGSVAEPEIEEWLKLGRLEEKCGGGGKGVVELLECLEREAIMGEDEG
Subjt:  SASLITPPPSPPFFHRSSTVVFHKLRPISAISPSWLCRRVAAAAPRCVSQGGWGGSVAEPEIEEWLKLGRLEEKCGGGGKGVVELLECLEREAIMGEDEG

Query:  REPTDYNRRAKIFSTSSEVFQALKQHSDAAPDP
        REPTDYNRRAKIFSTSSEVFQALKQHSDAAPDP
Subjt:  REPTDYNRRAKIFSTSSEVFQALKQHSDAAPDP

XP_038892559.1 uncharacterized protein LOC120081603 [Benincasa hispida]6.4e-5479.41Show/hide
Query:  VSASLITPPPSPPFFHRSSTVVFHKLRPISAISPSWLCRRVAAAAPRCVSQGGWGGSVAEPEIEEWLKLGRLEEKCGGGGKGVVELLECLEREAIMGEDE
        VSASLI PPP PP FHR ST VF K RP   IS  WL  R  A  PRCVSQGGWGGSVAE +IEEWLK G+LEEKCGGGGKGVVELLECLE+EAIMGEDE
Subjt:  VSASLITPPPSPPFFHRSSTVVFHKLRPISAISPSWLCRRVAAAAPRCVSQGGWGGSVAEPEIEEWLKLGRLEEKCGGGGKGVVELLECLEREAIMGEDE

Query:  GREPTDYNRRAKIFSTSSEVFQALKQHSDAAPDPPP
        G++PTDYNRRAKIFSTSS+VFQALKQHSDAA  PPP
Subjt:  GREPTDYNRRAKIFSTSSEVFQALKQHSDAAPDPPP

TrEMBL top hitse value%identityAlignment
A0A0A0KQQ4 Uncharacterized protein7.9e-5075.54Show/hide
Query:  VSASLITPPPSPPFFHRSSTVVFHKLRPISAISPSWLCRR--VAAAAPRCVSQGGWGGS--VAEPEIEEWLKLGRLEEKCGGGGKGVVELLECLEREAIM
        +SASLI+PPP PP  HR ST  F  LRP  ++S  WLC R   A A PRCVSQGGWG S  V E +IEEWLKLGRLEEKCGGGGKG+VELLECLE+EAIM
Subjt:  VSASLITPPPSPPFFHRSSTVVFHKLRPISAISPSWLCRR--VAAAAPRCVSQGGWGGS--VAEPEIEEWLKLGRLEEKCGGGGKGVVELLECLEREAIM

Query:  GEDEGREPTDYNRRAKIFSTSSEVFQALKQHSDAAPDPP
        GEDEGR+PTDYNRRAKIFSTSSEVFQALKQHSDA   PP
Subjt:  GEDEGREPTDYNRRAKIFSTSSEVFQALKQHSDAAPDPP

A0A1S3C540 uncharacterized protein LOC1034967601.8e-4673.91Show/hide
Query:  VSASLITPPPSPPFFHRSSTVVFHKLRPISAISPSWLCRRVAAAA--PRCVSQGGWGGSVAEPEIEEWLKLGRLEEKCGGGGKGVVELLECLEREAIMGE
        +SASLI PPP      R ST  F KLR   A+S  WL  R A A   PRCVSQGGWG SVAE +IEEWLKLGRLEEKCG GGKG+VELLECLE+EAIMGE
Subjt:  VSASLITPPPSPPFFHRSSTVVFHKLRPISAISPSWLCRRVAAAA--PRCVSQGGWGGSVAEPEIEEWLKLGRLEEKCGGGGKGVVELLECLEREAIMGE

Query:  DEGREPTDYNRRAKIFSTSSEVFQALKQHSDAAPDPPP
        DEGREPTDYNRRAKIFSTSSEVFQALKQH D    PPP
Subjt:  DEGREPTDYNRRAKIFSTSSEVFQALKQHSDAAPDPPP

A0A5D3DSR0 Uncharacterized protein1.8e-4673.91Show/hide
Query:  VSASLITPPPSPPFFHRSSTVVFHKLRPISAISPSWLCRRVAAAA--PRCVSQGGWGGSVAEPEIEEWLKLGRLEEKCGGGGKGVVELLECLEREAIMGE
        +SASLI PPP      R ST  F KLR   A+S  WL  R A A   PRCVSQGGWG SVAE +IEEWLKLGRLEEKCG GGKG+VELLECLE+EAIMGE
Subjt:  VSASLITPPPSPPFFHRSSTVVFHKLRPISAISPSWLCRRVAAAA--PRCVSQGGWGGSVAEPEIEEWLKLGRLEEKCGGGGKGVVELLECLEREAIMGE

Query:  DEGREPTDYNRRAKIFSTSSEVFQALKQHSDAAPDPPP
        DEGREPTDYNRRAKIFSTSSEVFQALKQH D    PPP
Subjt:  DEGREPTDYNRRAKIFSTSSEVFQALKQHSDAAPDPPP

A0A6J1FW01 uncharacterized protein LOC1114478174.8e-79100Show/hide
Query:  MQVVSASLITPPPSPPFFHRSSTVVFHKLRPISAISPSWLCRRVAAAAPRCVSQGGWGGSVAEPEIEEWLKLGRLEEKCGGGGKGVVELLECLEREAIMG
        MQVVSASLITPPPSPPFFHRSSTVVFHKLRPISAISPSWLCRRVAAAAPRCVSQGGWGGSVAEPEIEEWLKLGRLEEKCGGGGKGVVELLECLEREAIMG
Subjt:  MQVVSASLITPPPSPPFFHRSSTVVFHKLRPISAISPSWLCRRVAAAAPRCVSQGGWGGSVAEPEIEEWLKLGRLEEKCGGGGKGVVELLECLEREAIMG

Query:  EDEGREPTDYNRRAKIFSTSSEVFQALKQHSDAAPDPPPGLNLDGSSQ
        EDEGREPTDYNRRAKIFSTSSEVFQALKQHSDAAPDPPPGLNLDGSSQ
Subjt:  EDEGREPTDYNRRAKIFSTSSEVFQALKQHSDAAPDPPPGLNLDGSSQ

A0A6J1JM89 uncharacterized protein LOC1114859334.2e-6794.16Show/hide
Query:  MQVVSASLITPPPSPPFFHRSSTVVFHKLRPISAISPSWLCRRVAAAAPRCVSQGGWGGSVAEPEIEEWLKLGRLEEKCGGGGKGVVELLECLEREAIMG
        MQVVSASLI PPPSP FFHRSSTVVF K+RPISAISP W CRRVAAAAPRCVSQGGWGGSVAE EIEEWLKLGRL+EKCGGGGKGVVELLECLEREAIMG
Subjt:  MQVVSASLITPPPSPPFFHRSSTVVFHKLRPISAISPSWLCRRVAAAAPRCVSQGGWGGSVAEPEIEEWLKLGRLEEKCGGGGKGVVELLECLEREAIMG

Query:  EDEGREPTDYNRRAKIFSTSSEVFQALKQHSDAAPDP
        EDEGREPTDYNRRAKIFSTSSEVFQALKQHSDAAPDP
Subjt:  EDEGREPTDYNRRAKIFSTSSEVFQALKQHSDAAPDP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G05220.1 unknown protein4.6e-1845.3Show/hide
Query:  VFHKLRPISAISPSWLCRRVA----AAAPRCVSQGGWGGSVAEP-EIEEWLKLGRLEEKCGGG-GKGVVELLECLEREAIMGEDEGREPTDYNRRAKIFS
        ++    P++AI  + L  +V      AA RCV+ G    +  EP   EE  +L +    CGG   +GV ELLECLE+EAIMG D+GR+P DYNRRAKIF 
Subjt:  VFHKLRPISAISPSWLCRRVA----AAAPRCVSQGGWGGSVAEP-EIEEWLKLGRLEEKCGGG-GKGVVELLECLEREAIMGEDEGREPTDYNRRAKIFS

Query:  TSSEVFQALKQHSDAAP
         SS++F+ L +  D AP
Subjt:  TSSEVFQALKQHSDAAP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGTCGTCTCTGCATCTCTCATAACACCACCACCCTCGCCACCCTTCTTCCACCGCTCCTCCACCGTCGTCTTCCACAAGCTCAGGCCAATTTCAGCCATTTCCCC
ATCATGGCTCTGCCGTCGGGTTGCGGCGGCAGCGCCAAGATGTGTTAGTCAGGGTGGTTGGGGGGGCTCTGTGGCGGAGCCGGAGATAGAAGAGTGGCTGAAGCTAGGGA
GGTTGGAGGAGAAGTGTGGCGGAGGGGGGAAGGGAGTGGTGGAGCTGCTTGAATGTTTGGAAAGAGAAGCCATTATGGGGGAAGATGAAGGTAGAGAGCCTACAGATTAT
AATAGGAGGGCTAAGATTTTCAGTACCAGTTCTGAAGTGTTTCAAGCTCTCAAGCAACATTCTGATGCTGCTCCTGATCCCCCACCAGGCTTGAATCTTGATGGTTCATC
CCAATAA
mRNA sequenceShow/hide mRNA sequence
ATGCAAGTCGTCTCTGCATCTCTCATAACACCACCACCCTCGCCACCCTTCTTCCACCGCTCCTCCACCGTCGTCTTCCACAAGCTCAGGCCAATTTCAGCCATTTCCCC
ATCATGGCTCTGCCGTCGGGTTGCGGCGGCAGCGCCAAGATGTGTTAGTCAGGGTGGTTGGGGGGGCTCTGTGGCGGAGCCGGAGATAGAAGAGTGGCTGAAGCTAGGGA
GGTTGGAGGAGAAGTGTGGCGGAGGGGGGAAGGGAGTGGTGGAGCTGCTTGAATGTTTGGAAAGAGAAGCCATTATGGGGGAAGATGAAGGTAGAGAGCCTACAGATTAT
AATAGGAGGGCTAAGATTTTCAGTACCAGTTCTGAAGTGTTTCAAGCTCTCAAGCAACATTCTGATGCTGCTCCTGATCCCCCACCAGGCTTGAATCTTGATGGTTCATC
CCAATAA
Protein sequenceShow/hide protein sequence
MQVVSASLITPPPSPPFFHRSSTVVFHKLRPISAISPSWLCRRVAAAAPRCVSQGGWGGSVAEPEIEEWLKLGRLEEKCGGGGKGVVELLECLEREAIMGEDEGREPTDY
NRRAKIFSTSSEVFQALKQHSDAAPDPPPGLNLDGSSQ