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Carg00172 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg00172
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr04:5726021..5727336
RNA-Seq ExpressionCarg00172
SyntenyCarg00172
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7031517.1 hypothetical protein SDJN02_05557, partial [Cucurbita argyrosperma subsp. argyrosperma]1.6e-63100Show/hide
Query:  MMSNITPSSSQLTEIIEAVEHRFQRTIAKRISGAELDKRPAHTCHATIADFQHIWICPRTHGKMGIRDQLREQMDEVEWVSNTINLIPFQPPGPAYSAHL
        MMSNITPSSSQLTEIIEAVEHRFQRTIAKRISGAELDKRPAHTCHATIADFQHIWICPRTHGKMGIRDQLREQMDEVEWVSNTINLIPFQPPGPAYSAHL
Subjt:  MMSNITPSSSQLTEIIEAVEHRFQRTIAKRISGAELDKRPAHTCHATIADFQHIWICPRTHGKMGIRDQLREQMDEVEWVSNTINLIPFQPPGPAYSAHL

Query:  SLISAILVMLQPKQKTIFFEVH
        SLISAILVMLQPKQKTIFFEVH
Subjt:  SLISAILVMLQPKQKTIFFEVH
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGTCAAATATAACTCCAAGTTCAAGCCAGCTTACGGAGATCATTGAAGCAGTTGAACATCGATTCCAAAGAACAATAGCCAAGCGAATCTCAGGTGCAGAACTTGA
TAAGAGACCTGCCCACACCTGTCATGCCACCATTGCCGACTTCCAACATATCTGGATCTGTCCACGCACACATGGTAAGATGGGAATTAGAGATCAACTTAGAGAACAAA
TGGATGAAGTTGAATGGGTTTCAAACACAATCAATCTCATACCATTCCAACCACCAGGTCCTGCATACTCTGCCCACTTATCATTGATATCTGCAATTCTAGTCATGCTT
CAACCAAAACAAAAAACAATTTTTTTTGAAGTTCATTAA
mRNA sequenceShow/hide mRNA sequence
ATGATGTCAAATATAACTCCAAGTTCAAGCCAGCTTACGGAGATCATTGAAGCAGTTGAACATCGATTCCAAAGAACAATAGCCAAGCGAATCTCAGGTGCAGAACTTGA
TAAGAGACCTGCCCACACCTGTCATGCCACCATTGCCGACTTCCAACATATCTGGATCTGTCCACGCACACATGGTAAGATGGGAATTAGAGATCAACTTAGAGAACAAA
TGGATGAAGTTGAATGGGTTTCAAACACAATCAATCTCATACCATTCCAACCACCAGGTCCTGCATACTCTGCCCACTTATCATTGATATCTGCAATTCTAGTCATGCTT
CAACCAAAACAAAAAACAATTTTTTTTGAAGTTCATTAA
Protein sequenceShow/hide protein sequence
MMSNITPSSSQLTEIIEAVEHRFQRTIAKRISGAELDKRPAHTCHATIADFQHIWICPRTHGKMGIRDQLREQMDEVEWVSNTINLIPFQPPGPAYSAHLSLISAILVML
QPKQKTIFFEVH