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Carg00263 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg00263
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionprotein INVOLVED IN DE NOVO 2-like
Genome locationCarg_Chr04:6258324..6258931
RNA-Seq ExpressionCarg00263
SyntenyCarg00263
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7031606.1 hypothetical protein SDJN02_05647, partial [Cucurbita argyrosperma subsp. argyrosperma]1.4e-56100Show/hide
Query:  MRAYDIHHLLLLALAYQIADPAQAPVRLCRISPCLSFFYCPNSVLTPTPVLGFALNSRIQFPFSLPAQRTTTRLFFCARRLSILRLSSGLAAINGVSFPP
        MRAYDIHHLLLLALAYQIADPAQAPVRLCRISPCLSFFYCPNSVLTPTPVLGFALNSRIQFPFSLPAQRTTTRLFFCARRLSILRLSSGLAAINGVSFPP
Subjt:  MRAYDIHHLLLLALAYQIADPAQAPVRLCRISPCLSFFYCPNSVLTPTPVLGFALNSRIQFPFSLPAQRTTTRLFFCARRLSILRLSSGLAAINGVSFPP

Query:  FTWKCDLANIF
        FTWKCDLANIF
Subjt:  FTWKCDLANIF
XP_022139001.1 protein INVOLVED IN DE NOVO 2-like [Momordica charantia]3.2e-0559.57Show/hide
Query:  FFYCPNSVLTPTPVLGFALNSRIQFPFSLPAQRTTTRLFFCARRLSI
        F +CP+S+L PTP L FALNSRIQFPFS   +      FFC RRL I
Subjt:  FFYCPNSVLTPTPVLGFALNSRIQFPFSLPAQRTTTRLFFCARRLSI
TrEMBL top hitse value%identityAlignment
A0A6J1CCT0 protein INVOLVED IN DE NOVO 2-like1.5e-0559.57Show/hide
Query:  FFYCPNSVLTPTPVLGFALNSRIQFPFSLPAQRTTTRLFFCARRLSI
        F +CP+S+L PTP L FALNSRIQFPFS   +      FFC RRL I
Subjt:  FFYCPNSVLTPTPVLGFALNSRIQFPFSLPAQRTTTRLFFCARRLSI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGCGCGTACGATATTCATCATCTTTTGCTCTTAGCCTTAGCGTACCAAATCGCGGACCCCGCGCAGGCCCCAGTTCGACTTTGTCGCATTTCCCCGTGTCTCAGCTT
TTTCTACTGTCCAAACTCGGTCCTCACTCCAACCCCAGTTCTTGGATTCGCTCTCAATTCGCGAATTCAATTCCCCTTTTCTCTCCCAGCTCAGAGAACCACCACTCGTT
TGTTTTTCTGCGCCAGACGCCTCTCGATTCTCCGATTGTCGTCAGGTTTAGCTGCCATTAATGGAGTTTCTTTTCCTCCTTTCACGTGGAAGTGTGATTTAGCTAACATT
TTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGCGCGCGTACGATATTCATCATCTTTTGCTCTTAGCCTTAGCGTACCAAATCGCGGACCCCGCGCAGGCCCCAGTTCGACTTTGTCGCATTTCCCCGTGTCTCAGCTT
TTTCTACTGTCCAAACTCGGTCCTCACTCCAACCCCAGTTCTTGGATTCGCTCTCAATTCGCGAATTCAATTCCCCTTTTCTCTCCCAGCTCAGAGAACCACCACTCGTT
TGTTTTTCTGCGCCAGACGCCTCTCGATTCTCCGATTGTCGTCAGGTTTAGCTGCCATTAATGGAGTTTCTTTTCCTCCTTTCACGTGGAAGTGTGATTTAGCTAACATT
TTCTAG
Protein sequenceShow/hide protein sequence
MRAYDIHHLLLLALAYQIADPAQAPVRLCRISPCLSFFYCPNSVLTPTPVLGFALNSRIQFPFSLPAQRTTTRLFFCARRLSILRLSSGLAAINGVSFPPFTWKCDLANI
F