; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg00276 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg00276
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionserine/arginine-rich SC35-like splicing factor SCL30
Genome locationCarg_Chr04:6323123..6327623
RNA-Seq ExpressionCarg00276
SyntenyCarg00276
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601004.1 Serine/arginine-rich SC35-like splicing factor SCL30, partial [Cucurbita argyrosperma subsp. sororia]2.0e-15597.63Show/hide
Query:  FLVFPLFSSGRNMRRYSPPYHSPPRRGYGGRGRSPPGRGY-----GGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGQP
        FLVFPLFSSGRNMRRYSPPYHSPPRRGYGGRGRSPPGRGY     GGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGQP
Subjt:  FLVFPLFSSGRNMRRYSPPYHSPPRRGYGGRGRSPPGRGY-----GGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGQP

Query:  RGFAFVEFVDPYEASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSRSYSPAPRWR
        RGFAFVEFVDPYEASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSRSYSPAPRWR
Subjt:  RGFAFVEFVDPYEASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSRSYSPAPRWR

Query:  GDYSVSPSRRHADYPRSPRGAARERDGERSRQVYSPGYDNADGPDVD--GNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPRH
        GDYSVSPSRRHADYPRSPRGAARERDGERSRQVYSPGYDNADGPDVD  GNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPRH
Subjt:  GDYSVSPSRRHADYPRSPRGAARERDGERSRQVYSPGYDNADGPDVD--GNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPRH

KAG7031619.1 Serine/arginine-rich SC35-like splicing factor SCL30, partial [Cucurbita argyrosperma subsp. argyrosperma]2.7e-168100Show/hide
Query:  EYQESDRGEILSAHFLVFPLFSSGRNMRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYI
        EYQESDRGEILSAHFLVFPLFSSGRNMRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYI
Subjt:  EYQESDRGEILSAHFLVFPLFSSGRNMRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYI

Query:  PKDYYTGQPRGFAFVEFVDPYEASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSR
        PKDYYTGQPRGFAFVEFVDPYEASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSR
Subjt:  PKDYYTGQPRGFAFVEFVDPYEASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSR

Query:  SYSPAPRWRGDYSVSPSRRHADYPRSPRGAARERDGERSRQVYSPGYDNADGPDVDGNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASP
        SYSPAPRWRGDYSVSPSRRHADYPRSPRGAARERDGERSRQVYSPGYDNADGPDVDGNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASP
Subjt:  SYSPAPRWRGDYSVSPSRRHADYPRSPRGAARERDGERSRQVYSPGYDNADGPDVDGNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASP

Query:  RHGR
        RHGR
Subjt:  RHGR

XP_022957588.1 serine/arginine-rich SC35-like splicing factor SCL30 [Cucurbita moschata]1.2e-15098.93Show/hide
Query:  MRRYSPPYHSPPRRGYGGRGRSPPGRGY--GGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVDPYEAS
        MRRYSPPYHSPPRRGYGGRGRSPPGRGY  GGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVDPYEAS
Subjt:  MRRYSPPYHSPPRRGYGGRGRSPPGRGY--GGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVDPYEAS

Query:  EAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSRSYSPAPRWRGDYSVSPSRRHADYP
        EAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSRSYSPAPRWRGDYSVSPSRRHADYP
Subjt:  EAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSRSYSPAPRWRGDYSVSPSRRHADYP

Query:  RSPRGAARERDGERSRQVYSPGYDNADGPDVDGNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPRHGR
        RSPRGAARERDGER+RQVYSPGYDNADGPDVDGNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPRHGR
Subjt:  RSPRGAARERDGERSRQVYSPGYDNADGPDVDGNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPRHGR

XP_022987464.1 serine/arginine-rich SC35-like splicing factor SCL30 [Cucurbita maxima]2.0e-15097.54Show/hide
Query:  MRRYSPPYHSPPRRGYGGRGRSPPGRGY-------GGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVD
        MRRYSPPYHSPPRRGYGGRGRSPPGRGY       GGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVD
Subjt:  MRRYSPPYHSPPRRGYGGRGRSPPGRGY-------GGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVD

Query:  PYEASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSRSYSPAPRWRGDYSVSPSRR
        PYEASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSRSYSPAPRWRGDYSVSPSRR
Subjt:  PYEASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSRSYSPAPRWRGDYSVSPSRR

Query:  HADYPRSPRGAARERDGERSRQVYSPGYDNADGPDVDGNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPRHGR
        HADYPRSPRGAARERDGERSRQVYSPGYDNADGPDVDGNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPRHGR
Subjt:  HADYPRSPRGAARERDGERSRQVYSPGYDNADGPDVDGNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPRHGR

XP_023549438.1 serine/arginine-rich SC35-like splicing factor SCL30 [Cucurbita pepo subsp. pepo]2.9e-14997.89Show/hide
Query:  MRRYSPPYHSPPRRGYGGRGRSPPGRGY----GGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVDPYE
        MRRYSPPYHSPPRRGYGGRGRSPPGRGY    GGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVDPYE
Subjt:  MRRYSPPYHSPPRRGYGGRGRSPPGRGY----GGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVDPYE

Query:  ASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSRSYSPAPRWRGDYSVSPSRRHAD
        ASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSRSYSPAPRWRGDYSVSPSRRHAD
Subjt:  ASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSRSYSPAPRWRGDYSVSPSRRHAD

Query:  YPRSPRGAARERDGERSRQVYSPGYDNADGPDVD--GNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPRHGR
        YPRSPRGAARERDGERSRQVYSPGYDNADGPDVD  GNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPRHGR
Subjt:  YPRSPRGAARERDGERSRQVYSPGYDNADGPDVD--GNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPRHGR

TrEMBL top hitse value%identityAlignment
A0A1S3CFP8 serine/arginine-rich SC35-like splicing factor SCL306.0e-13791.84Show/hide
Query:  MRRYSPPYHSPPRRGYGGRGRSPPGRGY----GGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVDPYE
        MRRYSPPYHSPPRRGYGGRGRSPPGRGY    GGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTG+PRGFAFVEFVDPYE
Subjt:  MRRYSPPYHSPPRRGYGGRGRSPPGRGY----GGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVDPYE

Query:  ASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSRSYSPAPRWRGDYSVSPSRRHAD
        ASEAQYHMNGKKFAGREI VVLAAESRKRPEQMRQRSRRGPS YGGRRS+YGRSRSRSVSRSRSPRHPSGSRSR+RSRSYSPAPRWRGDYSVSP RRHAD
Subjt:  ASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSRSYSPAPRWRGDYSVSPSRRHAD

Query:  YPRSPRGAARERDGERSRQVYSPGYDNADGPDVDGNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPRHGR
        YP SPRGA RERD ERSRQVYSPGYDNAD  + D NGNGYHDK  FEGEDAR NWR SP RTSRSPSGSRSRSADASPRHGR
Subjt:  YPRSPRGAARERDGERSRQVYSPGYDNADGPDVDGNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPRHGR

A0A6J1CBL6 serine/arginine-rich SC35-like splicing factor SCL301.4e-13389.24Show/hide
Query:  MRRYSPPYHSPPRRGYGGRGRSPPGRGY----GGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVDPYE
        MRRYSPPYHSPPRRGYGGRGRSPPGRGY    GGGGGYGRRREQ HGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYY+G+PRGFAFVEFVDPYE
Subjt:  MRRYSPPYHSPPRRGYGGRGRSPPGRGY----GGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVDPYE

Query:  ASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSRSYSPAPRWRGDYSVSPSRRHAD
        ASEAQYHMNGKKFAGREI VVLAAESRKRPEQMRQRSRRGPS YGGRRSYYGRSRSRSVSRSRSP HPSGSRSR+RSRSYSPAPRWRGDYSVSPSRRHAD
Subjt:  ASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSRSYSPAPRWRGDYSVSPSRRHAD

Query:  YPRSPRGAARERDGERSRQVYSPGYDNADGPDVDGNGNGYHDKPAFEGEDARANW------RPSPDRTSRSPSGSRSRSADASPRHGR
        YPRSPRGA  ERDGERS+Q YSPGYDNADG D D  GNGYHDK AFEG D RANW      R SP R SRSPSGSRSRSADASPRHGR
Subjt:  YPRSPRGAARERDGERSRQVYSPGYDNADGPDVDGNGNGYHDKPAFEGEDARANW------RPSPDRTSRSPSGSRSRSADASPRHGR

A0A6J1FWZ5 serine/arginine-rich SC35-like splicing factor SCL306.2e-13491.76Show/hide
Query:  MRRYSPPYHSPPRRGYGGRGRSPPGRGY-GGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVDPYEASE
        MRRYSPPYHSPPRRGYGGRGRSPPGRGY GGGGGYGR+REQ HGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTG PRGFAFVEFVDPYEASE
Subjt:  MRRYSPPYHSPPRRGYGGRGRSPPGRGY-GGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVDPYEASE

Query:  AQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSRSYSPAPRWRGDYSVSPSRRHADYPR
        AQYHMNGKKFAGREI VVLAAESRKRPEQMRQRSRRGPS YGGRRSYYGRSRSRSVSRSRSP  PSGS SR+RSRSYSPAPRWRG+YS+SP RRHADYPR
Subjt:  AQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSRSYSPAPRWRGDYSVSPSRRHADYPR

Query:  SPRGAARERDGERSRQVYSPGYDNADGPDVDGNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPRHGR
        SPRGA RERDGERS QVYSPGYDNA G D D  GNGYHDKPAFEGEDARA+WR SP RTSRSPSGSRSRSADASPRHGR
Subjt:  SPRGAARERDGERSRQVYSPGYDNADGPDVDGNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPRHGR

A0A6J1H0N2 serine/arginine-rich SC35-like splicing factor SCL305.6e-15198.93Show/hide
Query:  MRRYSPPYHSPPRRGYGGRGRSPPGRGY--GGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVDPYEAS
        MRRYSPPYHSPPRRGYGGRGRSPPGRGY  GGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVDPYEAS
Subjt:  MRRYSPPYHSPPRRGYGGRGRSPPGRGY--GGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVDPYEAS

Query:  EAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSRSYSPAPRWRGDYSVSPSRRHADYP
        EAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSRSYSPAPRWRGDYSVSPSRRHADYP
Subjt:  EAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSRSYSPAPRWRGDYSVSPSRRHADYP

Query:  RSPRGAARERDGERSRQVYSPGYDNADGPDVDGNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPRHGR
        RSPRGAARERDGER+RQVYSPGYDNADGPDVDGNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPRHGR
Subjt:  RSPRGAARERDGERSRQVYSPGYDNADGPDVDGNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPRHGR

A0A6J1JIZ1 serine/arginine-rich SC35-like splicing factor SCL309.6e-15197.54Show/hide
Query:  MRRYSPPYHSPPRRGYGGRGRSPPGRGY-------GGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVD
        MRRYSPPYHSPPRRGYGGRGRSPPGRGY       GGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVD
Subjt:  MRRYSPPYHSPPRRGYGGRGRSPPGRGY-------GGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVD

Query:  PYEASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSRSYSPAPRWRGDYSVSPSRR
        PYEASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSRSYSPAPRWRGDYSVSPSRR
Subjt:  PYEASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSRSYSPAPRWRGDYSVSPSRR

Query:  HADYPRSPRGAARERDGERSRQVYSPGYDNADGPDVDGNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPRHGR
        HADYPRSPRGAARERDGERSRQVYSPGYDNADGPDVDGNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPRHGR
Subjt:  HADYPRSPRGAARERDGERSRQVYSPGYDNADGPDVDGNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPRHGR

SwissProt top hitse value%identityAlignment
Q1PDV2 Serine/arginine-rich SC35-like splicing factor SCL281.9e-2342.31Show/hide
Query:  RGRSPP--GRGYGGGGGYGRRREQPHGS-----LLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVDPYEASEAQYHMNGKKFAG
        R RSPP   +GY       R   + H S     LL+RN+P+D RP +LR  FERFG ++D+Y+P++YYTG+PRGF FV++    +A+EA   MN K   G
Subjt:  RGRSPP--GRGYGGGGGYGRRREQPHGS-----LLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVDPYEASEAQYHMNGKKFAG

Query:  REIAVVLAAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSRSYSPAPRWRGDYSVSPSRRHADYPRSPRGAARERDGE
        REIA+V A E+RK P++M  R+  G S   GR   Y R+  RS  R    R+ S SRSR   R  S   + R D   SP RR     RSP    R     
Subjt:  REIAVVLAAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSRSYSPAPRWRGDYSVSPSRRHADYPRSPRGAARERDGE

Query:  RSRQVYSP
        +SR   SP
Subjt:  RSRQVYSP

Q8L3X8 Serine/arginine-rich SC35-like splicing factor SCL307.2e-7964.31Show/hide
Query:  MRRYSPPYHSPPRRGYGGRGRS----PPGRGYGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVDPYE
        MRRYSPPY+SPPRRGYGGRGRS    PP RGYGGGGG G RR   HGSLLVRNIP+DCRPEELR PFERFG VRDVYIP+DYY+GQPRGFAFVEFVD Y+
Subjt:  MRRYSPPYHSPPRRGYGGRGRS----PPGRGYGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVDPYE

Query:  ASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRSR-RGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSRSYSPAPRWRGDYSVSPSRRHA
        A EAQ  MN + FAGREI VV+A+ESRKRPE+MR ++R R     G R   +GRSRSRS+SRSRSPR PS SRSR+RSRSYSPAPR RG           
Subjt:  ASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRSR-RGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSRSYSPAPRWRGDYSVSPSRRHA

Query:  DYPRSPRGAARERDGERSRQVYSPGYDN--ADGPDVDGNG-NGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPR
             PRG   E D   SR+ YSPGY+   A  PD D NG N   +KP +E ED R   R      SRSPSGSRSRS + SPR
Subjt:  DYPRSPRGAARERDGERSRQVYSPGYDN--ADGPDVDGNG-NGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPR

Q8WXF0 Serine/arginine-rich splicing factor 122.4e-1837.29Show/hide
Query:  RRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVDPYEASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRSRR
        R    P+ SL +RN+    RPE+LR  F R+G + DVYIP D+YT +PRGFA+V+F D  +A +A Y++N K   GR+I +  A   RK P QM+ + R 
Subjt:  RRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVDPYEASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRSRR

Query:  --GPSDYGGRRS-YYGRSRSRSVSRSRSPRH-PSGSRSRHRSRSYSPA-PRWRGDYSVSPSRRHADYPRSPRGA-ARERDGERSRQVYSPGYDNADGPDV
           PSD+   RS    R+RSRS S  R+ R   S   SRHR  SYS +  R +     S S R +  PR   G+  R R     ++  S G   +  P  
Subjt:  --GPSDYGGRRS-YYGRSRSRSVSRSRSPRH-PSGSRSRHRSRSYSPA-PRWRGDYSVSPSRRHADYPRSPRGA-ARERDGERSRQVYSPGYDNADGPDV

Query:  DGNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGS
                 K    G  +R++ R S D  +RSP  S
Subjt:  DGNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGS

Q9LHP2 Serine/arginine-rich SC35-like splicing factor SCL30A3.0e-3241.64Show/hide
Query:  RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVDPYEASEAQ
        R Y+P   SPP RGYG RGRSP  RG  GG     R      SLLVRN+  DCR E+LR PFE+FG V+D+Y+P+DYYTG PRGF F++F+DP +A+EA+
Subjt:  RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVDPYEASEAQ

Query:  YHMNGKKFAGREIAVVLAAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSRSY-SPAPRWRGDYSVSPSRRHADYPRS
        + M+G    GRE+ VV A E+RK+P +MR R R      GGR + +   R      SRSP    G RSR RSR Y SP  +     SVSP  R  +  RS
Subjt:  YHMNGKKFAGREIAVVLAAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSRSY-SPAPRWRGDYSVSPSRRHADYPRS

Query:  -----PRGAARERDGERSRQVYSPGYDNADGPDVDGNGNGYHDKPAFEGEDARANWRPSPDRT-SRSPSGSRSRSADASPR
             P   +R R G       SPG   +            H +        R N   +P++  S+SP   +SRS    PR
Subjt:  -----PRGAARERDGERSRQVYSPGYDNADGPDVDGNGNGYHDKPAFEGEDARANWRPSPDRT-SRSPSGSRSRSADASPR

Q9SEU4 Serine/arginine-rich SC35-like splicing factor SCL334.1e-3446.21Show/hide
Query:  RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVDPYEASEAQ
        R Y+P   SPP RGYG RGRSP  RG  G    GR R+ P  SLLVRN+  DCR E+LR  FE+FG V+D+Y+P+DYYTG PRGF FV+F+DP +A++A+
Subjt:  RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVDPYEASEAQ

Query:  YHMNGKKFAGREIAVVLAAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSRSYSPAPRWRGDYSVSPSRRHADYPRSP
        +HM+G    GRE+ VV A E+RK+P +MR R R      GGR     R+  R  SRSRSP  P   RSR RS          GDY   P RRH  +PRS 
Subjt:  YHMNGKKFAGREIAVVLAAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSRSYSPAPRWRGDYSVSPSRRHADYPRSP

Query:  RGAARERDGERSRQVYSPGYDNADG---PDVDGNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPR
               DG RS    SP  D + G     V G        P       R +   SP R SRSPS  R+RS   SPR
Subjt:  RGAARERDGERSRQVYSPGYDNADG---PDVDGNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPR

Arabidopsis top hitse value%identityAlignment
AT1G55310.1 SC35-like splicing factor 332.9e-3546.21Show/hide
Query:  RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVDPYEASEAQ
        R Y+P   SPP RGYG RGRSP  RG  G    GR R+ P  SLLVRN+  DCR E+LR  FE+FG V+D+Y+P+DYYTG PRGF FV+F+DP +A++A+
Subjt:  RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVDPYEASEAQ

Query:  YHMNGKKFAGREIAVVLAAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSRSYSPAPRWRGDYSVSPSRRHADYPRSP
        +HM+G    GRE+ VV A E+RK+P +MR R R      GGR     R+  R  SRSRSP  P   RSR RS          GDY   P RRH  +PRS 
Subjt:  YHMNGKKFAGREIAVVLAAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSRSYSPAPRWRGDYSVSPSRRHADYPRSP

Query:  RGAARERDGERSRQVYSPGYDNADG---PDVDGNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPR
               DG RS    SP  D + G     V G        P       R +   SP R SRSPS  R+RS   SPR
Subjt:  RGAARERDGERSRQVYSPGYDNADG---PDVDGNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPR

AT1G55310.2 SC35-like splicing factor 333.5e-3649.55Show/hide
Query:  RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVDPYEASEAQ
        R Y+P   SPP RGYG RGRSP  RG  G    GR R+ P  SLLVRN+  DCR E+LR  FE+FG V+D+Y+P+DYYTG PRGF FV+F+DP +A++A+
Subjt:  RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVDPYEASEAQ

Query:  YHMNGKKFAGREIAVVLAAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSRS-YSPAPRWRGDYSVSPSRRHAD----
        +HM+G    GRE+ VV A E+RK+P +MR R R      GGR     R+  R  SRSRSP  P   RSR RS   YSP PR     S+SP     D    
Subjt:  YHMNGKKFAGREIAVVLAAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSRS-YSPAPRWRGDYSVSPSRRHAD----

Query:  YPRSPRGAARERDGERSRQV
        Y RSP       DG R R +
Subjt:  YPRSPRGAARERDGERSRQV

AT1G55310.3 SC35-like splicing factor 337.2e-3444.64Show/hide
Query:  RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTG------------QPRGFAFV
        R Y+P   SPP RGYG RGRSP  RG  G    GR R+ P  SLLVRN+  DCR E+LR  FE+FG V+D+Y+P+DYYTG             PRGF FV
Subjt:  RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTG------------QPRGFAFV

Query:  EFVDPYEASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSRSYSPAPRWRGDYSVS
        +F+DP +A++A++HM+G    GRE+ VV A E+RK+P +MR R R G S +  RR    R+  R  SRSRSP  P   RSR RS          GDY   
Subjt:  EFVDPYEASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSRSYSPAPRWRGDYSVS

Query:  PSRRHADYPRSPRGAARERDGERSRQVYSPGYDNADG---PDVDGNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPR
        P RRH  +PRS        DG RS    SP  D + G     V G        P       R +   SP R SRSPS  R+RS   SPR
Subjt:  PSRRHADYPRSPRGAARERDGERSRQVYSPGYDNADG---PDVDGNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPR

AT3G13570.1 SC35-like splicing factor 30A2.1e-3341.64Show/hide
Query:  RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVDPYEASEAQ
        R Y+P   SPP RGYG RGRSP  RG  GG     R      SLLVRN+  DCR E+LR PFE+FG V+D+Y+P+DYYTG PRGF F++F+DP +A+EA+
Subjt:  RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVDPYEASEAQ

Query:  YHMNGKKFAGREIAVVLAAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSRSY-SPAPRWRGDYSVSPSRRHADYPRS
        + M+G    GRE+ VV A E+RK+P +MR R R      GGR + +   R      SRSP    G RSR RSR Y SP  +     SVSP  R  +  RS
Subjt:  YHMNGKKFAGREIAVVLAAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSRSY-SPAPRWRGDYSVSPSRRHADYPRS

Query:  -----PRGAARERDGERSRQVYSPGYDNADGPDVDGNGNGYHDKPAFEGEDARANWRPSPDRT-SRSPSGSRSRSADASPR
             P   +R R G       SPG   +            H +        R N   +P++  S+SP   +SRS    PR
Subjt:  -----PRGAARERDGERSRQVYSPGYDNADGPDVDGNGNGYHDKPAFEGEDARANWRPSPDRT-SRSPSGSRSRSADASPR

AT3G55460.1 SC35-like splicing factor 305.1e-8064.31Show/hide
Query:  MRRYSPPYHSPPRRGYGGRGRS----PPGRGYGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVDPYE
        MRRYSPPY+SPPRRGYGGRGRS    PP RGYGGGGG G RR   HGSLLVRNIP+DCRPEELR PFERFG VRDVYIP+DYY+GQPRGFAFVEFVD Y+
Subjt:  MRRYSPPYHSPPRRGYGGRGRS----PPGRGYGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVDPYE

Query:  ASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRSR-RGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSRSYSPAPRWRGDYSVSPSRRHA
        A EAQ  MN + FAGREI VV+A+ESRKRPE+MR ++R R     G R   +GRSRSRS+SRSRSPR PS SRSR+RSRSYSPAPR RG           
Subjt:  ASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRSR-RGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSRSYSPAPRWRGDYSVSPSRRHA

Query:  DYPRSPRGAARERDGERSRQVYSPGYDN--ADGPDVDGNG-NGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPR
             PRG   E D   SR+ YSPGY+   A  PD D NG N   +KP +E ED R   R      SRSPSGSRSRS + SPR
Subjt:  DYPRSPRGAARERDGERSRQVYSPGYDN--ADGPDVDGNG-NGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GAGTATCAGGAATCAGATCGAGGGGAAATTCTCTCTGCGCATTTTCTTGTCTTCCCGCTCTTTTCTTCAGGTCGAAACATGAGAAGATACAGTCCACCATATCATAGCCC
TCCAAGAAGAGGATATGGTGGTCGTGGAAGAAGCCCCCCAGGAAGGGGTTATGGTGGTGGTGGTGGGTATGGAAGACGAAGGGAACAGCCTCATGGTAGCCTTTTGGTTA
GAAATATTCCTATGGATTGCAGGCCAGAGGAGCTTAGAGCGCCATTTGAGAGGTTTGGACTTGTTCGCGATGTGTATATTCCAAAGGACTATTACACAGGTCAGCCTCGA
GGATTTGCATTTGTGGAGTTTGTTGATCCTTACGAGGCTTCTGAAGCTCAGTACCATATGAATGGGAAGAAGTTTGCTGGTAGGGAGATTGCTGTGGTCCTTGCTGCAGA
ATCAAGGAAGAGGCCAGAACAGATGCGCCAAAGGAGTAGAAGGGGACCATCAGACTATGGTGGACGCCGTTCTTATTATGGGCGTTCTAGATCTCGTTCAGTATCCAGAT
CACGCTCCCCCCGTCATCCTTCAGGCTCAAGAAGTAGACACCGATCAAGATCCTATTCTCCTGCTCCAAGATGGCGAGGCGACTATTCTGTTTCCCCTAGTAGAAGGCAT
GCAGATTACCCCAGATCGCCGAGAGGTGCTGCTCGTGAGCGAGATGGTGAGAGGAGTCGACAAGTATATTCTCCAGGTTATGATAATGCTGATGGTCCTGATGTCGATGG
AAATGGAAATGGATATCATGACAAGCCTGCATTTGAAGGGGAGGATGCACGAGCTAATTGGAGGCCTTCTCCTGATAGAACATCAAGATCACCTTCGGGGTCTCGATCCC
GCTCTGCTGATGCGTCCCCAAGGCATGGTAGATGA
mRNA sequenceShow/hide mRNA sequence
GAGTATCAGGAATCAGATCGAGGGGAAATTCTCTCTGCGCATTTTCTTGTCTTCCCGCTCTTTTCTTCAGGTCGAAACATGAGAAGATACAGTCCACCATATCATAGCCC
TCCAAGAAGAGGATATGGTGGTCGTGGAAGAAGCCCCCCAGGAAGGGGTTATGGTGGTGGTGGTGGGTATGGAAGACGAAGGGAACAGCCTCATGGTAGCCTTTTGGTTA
GAAATATTCCTATGGATTGCAGGCCAGAGGAGCTTAGAGCGCCATTTGAGAGGTTTGGACTTGTTCGCGATGTGTATATTCCAAAGGACTATTACACAGGTCAGCCTCGA
GGATTTGCATTTGTGGAGTTTGTTGATCCTTACGAGGCTTCTGAAGCTCAGTACCATATGAATGGGAAGAAGTTTGCTGGTAGGGAGATTGCTGTGGTCCTTGCTGCAGA
ATCAAGGAAGAGGCCAGAACAGATGCGCCAAAGGAGTAGAAGGGGACCATCAGACTATGGTGGACGCCGTTCTTATTATGGGCGTTCTAGATCTCGTTCAGTATCCAGAT
CACGCTCCCCCCGTCATCCTTCAGGCTCAAGAAGTAGACACCGATCAAGATCCTATTCTCCTGCTCCAAGATGGCGAGGCGACTATTCTGTTTCCCCTAGTAGAAGGCAT
GCAGATTACCCCAGATCGCCGAGAGGTGCTGCTCGTGAGCGAGATGGTGAGAGGAGTCGACAAGTATATTCTCCAGGTTATGATAATGCTGATGGTCCTGATGTCGATGG
AAATGGAAATGGATATCATGACAAGCCTGCATTTGAAGGGGAGGATGCACGAGCTAATTGGAGGCCTTCTCCTGATAGAACATCAAGATCACCTTCGGGGTCTCGATCCC
GCTCTGCTGATGCGTCCCCAAGGCATGGTAGATGATGTGAAACTATGGTTTCTAAAATCTAACATTTGTTACTCTGAAGTTAGTATCCACTATCCGTTTTAAGATTGTAT
TTTGTATGATGCTCTTAGTGATCGGATTTTCTAGACAGGCAAATTGCTTTTCTTATATTTTTGAAGCTTAAAATTATTATGGTAGCCCACCAAACCTCTTGCTACTTTTC
TGGATTGTCAATGCTCTTCTTCTTCCTCATATGTCTATCTCATTTAGCACCATCGACAATACTGTGACCCTTCTCATTCATCTATTTGTTCTTCACTAGCAATTTAACTC
CATCATGTTTGGTGGAGAGAATGTGGTTACATTTGACAAGATAGAAATTAAAAATAAGCAAGGCCTCTCTGTTTCTGTTTGAAGTC
Protein sequenceShow/hide protein sequence
EYQESDRGEILSAHFLVFPLFSSGRNMRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGYGRRREQPHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGQPR
GFAFVEFVDPYEASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSRSYSPAPRWRGDYSVSPSRRH
ADYPRSPRGAARERDGERSRQVYSPGYDNADGPDVDGNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPRHGR