; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg00291 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg00291
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description60S ribosomal protein L35
Genome locationCarg_Chr04:6413481..6414799
RNA-Seq ExpressionCarg00291
SyntenyCarg00291
Gene Ontology termsGO:0000463 - maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (biological process)
GO:0006412 - translation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001854 - Ribosomal protein L29/L35
IPR036049 - Ribosomal protein L29/L35 superfamily
IPR045059 - 60S ribosomal protein L35


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601021.1 Spliceosome-associated protein 130 B, partial [Cucurbita argyrosperma subsp. sororia]6.7e-6499.29Show/hide
Query:  RPPPNPKTPQPVSAYQILMARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLD
        +PPPNPKTPQPVSAYQILMARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLD
Subjt:  RPPPNPKTPQPVSAYQILMARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLD

Query:  LRPKKTRAIRRRLTKHQASLKTEREKKKEMYYPLRKYAIKV
        LRPKKTRAIRRRLTKHQASLKTEREKKKEMYYPLRKYAIKV
Subjt:  LRPKKTRAIRRRLTKHQASLKTEREKKKEMYYPLRKYAIKV

KAG7031634.1 60S ribosomal protein L35, partial [Cucurbita argyrosperma subsp. argyrosperma]5.9e-68100Show/hide
Query:  GCASCRPPPNPKTPQPVSAYQILMARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKK
        GCASCRPPPNPKTPQPVSAYQILMARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKK
Subjt:  GCASCRPPPNPKTPQPVSAYQILMARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKK

Query:  LLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKEMYYPLRKYAIKV
        LLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKEMYYPLRKYAIKV
Subjt:  LLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKEMYYPLRKYAIKV

XP_022134532.1 60S ribosomal protein L35 [Momordica charantia]4.5e-5297.56Show/hide
Query:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELRQKSKADLLTQLKDLKAEL+LLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTEREKKKEMYYPLRKYAIKV
        SLKTER+KKKEMY+PLRKYAIKV
Subjt:  SLKTEREKKKEMYYPLRKYAIKV

XP_022939961.1 60S ribosomal protein L35 [Cucurbita moschata]3.1e-53100Show/hide
Query:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTEREKKKEMYYPLRKYAIKV
        SLKTEREKKKEMYYPLRKYAIKV
Subjt:  SLKTEREKKKEMYYPLRKYAIKV

XP_023549703.1 60S ribosomal protein L35-like [Cucurbita pepo subsp. pepo]2.0e-5298.37Show/hide
Query:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELRQKSK DLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRR+LTKHQA
Subjt:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTEREKKKEMYYPLRKYAIKV
        SLKTEREKKKEMYYPLRKYAIKV
Subjt:  SLKTEREKKKEMYYPLRKYAIKV

TrEMBL top hitse value%identityAlignment
A0A0A0KQT2 Uncharacterized protein4.9e-5297.56Show/hide
Query:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELRQKSKADLL QLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTEREKKKEMYYPLRKYAIKV
        SLKTER+KKKEMY+PLRKYAIKV
Subjt:  SLKTEREKKKEMYYPLRKYAIKV

A0A6J1BZV3 60S ribosomal protein L352.2e-5297.56Show/hide
Query:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELRQKSKADLLTQLKDLKAEL+LLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTEREKKKEMYYPLRKYAIKV
        SLKTER+KKKEMY+PLRKYAIKV
Subjt:  SLKTEREKKKEMYYPLRKYAIKV

A0A6J1E5L3 60S ribosomal protein L35-like2.2e-5298.37Show/hide
Query:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTEREKKKEMYYPLRKYAIKV
        SL TER+KKKEMYYPLRKYAIKV
Subjt:  SLKTEREKKKEMYYPLRKYAIKV

A0A6J1FH81 60S ribosomal protein L351.5e-53100Show/hide
Query:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTEREKKKEMYYPLRKYAIKV
        SLKTEREKKKEMYYPLRKYAIKV
Subjt:  SLKTEREKKKEMYYPLRKYAIKV

A0A6J1JVN4 60S ribosomal protein L351.5e-53100Show/hide
Query:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTEREKKKEMYYPLRKYAIKV
        SLKTEREKKKEMYYPLRKYAIKV
Subjt:  SLKTEREKKKEMYYPLRKYAIKV

SwissProt top hitse value%identityAlignment
O80626 60S ribosomal protein L35-21.2e-5091.06Show/hide
Query:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELR+KSKADL  QLK+ KAEL+LLRVAKVTGGAPNKLSKIKVVR SIAQVLTVISQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTEREKKKEMYYPLRKYAIKV
        SLKTEREKKKEMY+P+RKYAIKV
Subjt:  SLKTEREKKKEMYYPLRKYAIKV

Q9LZ41 60S ribosomal protein L35-44.4e-5090.24Show/hide
Query:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELR KSK DL  QLK+ KAEL+LLRVAKVTGGAPNKLSKIKVVR SIAQVLTVISQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTEREKKKEMYYPLRKYAIKV
        SLKTEREKKKEMY+P+RKYAIKV
Subjt:  SLKTEREKKKEMYYPLRKYAIKV

Q9M3D2 60S ribosomal protein L35-31.3e-4989.43Show/hide
Query:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELR KSK+DL TQLK+LKAEL+ LRVAKVTGGAPNKLSKIKVVR SIAQVLTV SQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTEREKKKEMYYPLRKYAIKV
        SLKTEREKKK+MY+P+RKYAIKV
Subjt:  SLKTEREKKKEMYYPLRKYAIKV

Q9M5L0 60S ribosomal protein L351.8e-5191.87Show/hide
Query:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELRQK+KA+LL QLKDLKAEL+LLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQK ALREAYK KK LPLDLRPKKTRAIRRRLTKHQ 
Subjt:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTEREKKKEMYYPLRKYAIKV
        SLKTEREKKKEMY+P+RKYAIKV
Subjt:  SLKTEREKKKEMYYPLRKYAIKV

Q9SF53 60S ribosomal protein L35-12.6e-5090.24Show/hide
Query:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELR+KSK+DL  QLK+LKAEL+LLRVAKVTGGAPNKLSKIKVVR SIAQVLTV SQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTEREKKKEMYYPLRKYAIKV
        SLKTEREKKKEMY+P+RKYAIKV
Subjt:  SLKTEREKKKEMYYPLRKYAIKV

Arabidopsis top hitse value%identityAlignment
AT2G39390.1 Ribosomal L29 family protein8.2e-5291.06Show/hide
Query:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELR+KSKADL  QLK+ KAEL+LLRVAKVTGGAPNKLSKIKVVR SIAQVLTVISQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTEREKKKEMYYPLRKYAIKV
        SLKTEREKKKEMY+P+RKYAIKV
Subjt:  SLKTEREKKKEMYYPLRKYAIKV

AT3G09500.1 Ribosomal L29 family protein1.8e-5190.24Show/hide
Query:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELR+KSK+DL  QLK+LKAEL+LLRVAKVTGGAPNKLSKIKVVR SIAQVLTV SQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTEREKKKEMYYPLRKYAIKV
        SLKTEREKKKEMY+P+RKYAIKV
Subjt:  SLKTEREKKKEMYYPLRKYAIKV

AT3G55170.1 Ribosomal L29 family protein9.1e-5189.43Show/hide
Query:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELR KSK+DL TQLK+LKAEL+ LRVAKVTGGAPNKLSKIKVVR SIAQVLTV SQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTEREKKKEMYYPLRKYAIKV
        SLKTEREKKK+MY+P+RKYAIKV
Subjt:  SLKTEREKKKEMYYPLRKYAIKV

AT3G55170.2 Ribosomal L29 family protein9.1e-5189.43Show/hide
Query:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELR KSK+DL TQLK+LKAEL+ LRVAKVTGGAPNKLSKIKVVR SIAQVLTV SQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTEREKKKEMYYPLRKYAIKV
        SLKTEREKKK+MY+P+RKYAIKV
Subjt:  SLKTEREKKKEMYYPLRKYAIKV

AT5G02610.1 Ribosomal L29 family protein3.1e-5190.24Show/hide
Query:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELR KSK DL  QLK+ KAEL+LLRVAKVTGGAPNKLSKIKVVR SIAQVLTVISQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTEREKKKEMYYPLRKYAIKV
        SLKTEREKKKEMY+P+RKYAIKV
Subjt:  SLKTEREKKKEMYYPLRKYAIKV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GGTTGTGCTAGTTGCAGACCTCCGCCAAATCCCAAAACACCACAGCCGGTCTCTGCTTATCAGATTCTAATGGCGAGAATTAAGGTTCACGAGCTTAGACAGAAGTCTAA
GGCGGATCTTTTGACCCAGCTTAAGGACCTTAAGGCGGAGCTTTCTCTGCTCCGTGTCGCTAAGGTCACTGGTGGTGCTCCTAACAAGCTCTCCAAAATTAAGGTTGTGA
GGTTATCAATCGCTCAGGTGTTGACAGTGATTTCTCAGAAACAAAAGGCAGCTCTTAGGGAAGCTTACAAGAAGAAGAAGCTTTTGCCTCTTGATTTACGTCCCAAGAAG
ACCAGGGCCATTCGTAGAAGGCTTACCAAGCACCAAGCATCTCTAAAGACGGAGCGAGAGAAGAAGAAAGAAATGTACTACCCATTGAGGAAGTACGCTATTAAGGTGTA
G
mRNA sequenceShow/hide mRNA sequence
GGTTGTGCTAGTTGCAGACCTCCGCCAAATCCCAAAACACCACAGCCGGTCTCTGCTTATCAGATTCTAATGGCGAGAATTAAGGTTCACGAGCTTAGACAGAAGTCTAA
GGCGGATCTTTTGACCCAGCTTAAGGACCTTAAGGCGGAGCTTTCTCTGCTCCGTGTCGCTAAGGTCACTGGTGGTGCTCCTAACAAGCTCTCCAAAATTAAGGTTGTGA
GGTTATCAATCGCTCAGGTGTTGACAGTGATTTCTCAGAAACAAAAGGCAGCTCTTAGGGAAGCTTACAAGAAGAAGAAGCTTTTGCCTCTTGATTTACGTCCCAAGAAG
ACCAGGGCCATTCGTAGAAGGCTTACCAAGCACCAAGCATCTCTAAAGACGGAGCGAGAGAAGAAGAAAGAAATGTACTACCCATTGAGGAAGTACGCTATTAAGGTGTA
G
Protein sequenceShow/hide protein sequence
GCASCRPPPNPKTPQPVSAYQILMARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKK
TRAIRRRLTKHQASLKTEREKKKEMYYPLRKYAIKV