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Carg00294 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg00294
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptioncarbon catabolite repressor protein 4 homolog 4
Genome locationCarg_Chr04:6449738..6451464
RNA-Seq ExpressionCarg00294
SyntenyCarg00294
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7031637.1 Carbon catabolite repressor protein 4-like 4, partial [Cucurbita argyrosperma subsp. argyrosperma]3.8e-23100Show/hide
Query:  MSTVQSPKHPKFISEEGADIYSRSKPDARFKTSVSERFECTPSVPLAGDFNSNPGD
        MSTVQSPKHPKFISEEGADIYSRSKPDARFKTSVSERFECTPSVPLAGDFNSNPGD
Subjt:  MSTVQSPKHPKFISEEGADIYSRSKPDARFKTSVSERFECTPSVPLAGDFNSNPGD
KHN41755.1 Carbon catabolite repressor protein 4 like 4 [Glycine soja]5.9e-0848Show/hide
Query:  SPKHPKFISEEGADIYSRSKPD------------------------ARFKTSVSERFECTPSVPLAGDFNSNPGD
        SP  PKF+S EGADI+SR+KPD                        A+FKT +S+R+EC P V LAGDFNS PGD
Subjt:  SPKHPKFISEEGADIYSRSKPD------------------------ARFKTSVSERFECTPSVPLAGDFNSNPGD
XP_022976794.1 carbon catabolite repressor protein 4 homolog 4 isoform X2 [Cucurbita maxima]3.9e-0482.76Show/hide
Query:  ARFKTSVSERFECTPSVPLAGDFNSNPGD
        ARFKT VSE+FECTPS+ LAGDFNS PGD
Subjt:  ARFKTSVSERFECTPSVPLAGDFNSNPGD
XP_022981748.1 uncharacterized protein LOC111480806 isoform X1 [Cucurbita maxima]3.3e-1156.96Show/hide
Query:  MSTVQSPKHPKFISEEGADIYSRSKPD---------------------------------ARFKTSVSERFECTPSVPL
        MSTVQSPKHPKFISEEGADIYSRSKPD                                  RFKTSVSERFECTPSVPL
Subjt:  MSTVQSPKHPKFISEEGADIYSRSKPD---------------------------------ARFKTSVSERFECTPSVPL
XP_022981749.1 uncharacterized protein LOC111480806 isoform X2 [Cucurbita maxima]3.3e-1156.96Show/hide
Query:  MSTVQSPKHPKFISEEGADIYSRSKPD---------------------------------ARFKTSVSERFECTPSVPL
        MSTVQSPKHPKFISEEGADIYSRSKPD                                  RFKTSVSERFECTPSVPL
Subjt:  MSTVQSPKHPKFISEEGADIYSRSKPD---------------------------------ARFKTSVSERFECTPSVPL
TrEMBL top hitse value%identityAlignment
A0A6J1F8E0 carbon catabolite repressor protein 4 homolog 4 isoform X11.9e-0482.76Show/hide
Query:  ARFKTSVSERFECTPSVPLAGDFNSNPGD
        ARFKT VSE+FECTPS+ LAGDFNS PGD
Subjt:  ARFKTSVSERFECTPSVPLAGDFNSNPGD
A0A6J1F8E0 carbon catabolite repressor protein 4 homolog 4 isoform X11.8e-0275Show/hide
Query:  MSTVQSPKHPKFISEEGADIYSRSKPDA-RFK
        M+ VQ+PKHPKFIS EGADIYSRSK D  RF+
Subjt:  MSTVQSPKHPKFISEEGADIYSRSKPDA-RFK
A0A6J1IN76 carbon catabolite repressor protein 4 homolog 4 isoform X11.9e-0482.76Show/hide
Query:  ARFKTSVSERFECTPSVPLAGDFNSNPGD
        ARFKT VSE+FECTPS+ LAGDFNS PGD
Subjt:  ARFKTSVSERFECTPSVPLAGDFNSNPGD
A0A6J1IPN5 carbon catabolite repressor protein 4 homolog 4 isoform X21.9e-0482.76Show/hide
Query:  ARFKTSVSERFECTPSVPLAGDFNSNPGD
        ARFKT VSE+FECTPS+ LAGDFNS PGD
Subjt:  ARFKTSVSERFECTPSVPLAGDFNSNPGD
A0A6J1J2Q6 uncharacterized protein LOC111480806 isoform X21.6e-1156.96Show/hide
Query:  MSTVQSPKHPKFISEEGADIYSRSKPD---------------------------------ARFKTSVSERFECTPSVPL
        MSTVQSPKHPKFISEEGADIYSRSKPD                                  RFKTSVSERFECTPSVPL
Subjt:  MSTVQSPKHPKFISEEGADIYSRSKPD---------------------------------ARFKTSVSERFECTPSVPL
A0A6J1J2Y5 uncharacterized protein LOC111480806 isoform X11.6e-1156.96Show/hide
Query:  MSTVQSPKHPKFISEEGADIYSRSKPD---------------------------------ARFKTSVSERFECTPSVPL
        MSTVQSPKHPKFISEEGADIYSRSKPD                                  RFKTSVSERFECTPSVPL
Subjt:  MSTVQSPKHPKFISEEGADIYSRSKPD---------------------------------ARFKTSVSERFECTPSVPL
SwissProt top hitse value%identityAlignment
A8MS41 Carbon catabolite repressor protein 4 homolog 42.8e-0572.41Show/hide
Query:  ARFKTSVSERFECTPSVPLAGDFNSNPGD
        A+FKT +S+ FECTPS+ LAGDFNS PGD
Subjt:  ARFKTSVSERFECTPSVPLAGDFNSNPGD
Arabidopsis top hitse value%identityAlignment
AT1G31500.1 DNAse I-like superfamily protein2.0e-0672.41Show/hide
Query:  ARFKTSVSERFECTPSVPLAGDFNSNPGD
        A+FKT +S+ FECTPS+ LAGDFNS PGD
Subjt:  ARFKTSVSERFECTPSVPLAGDFNSNPGD
AT1G31500.2 DNAse I-like superfamily protein2.0e-0672.41Show/hide
Query:  ARFKTSVSERFECTPSVPLAGDFNSNPGD
        A+FKT +S+ FECTPS+ LAGDFNS PGD
Subjt:  ARFKTSVSERFECTPSVPLAGDFNSNPGD
AT1G31500.3 DNAse I-like superfamily protein2.0e-0672.41Show/hide
Query:  ARFKTSVSERFECTPSVPLAGDFNSNPGD
        A+FKT +S+ FECTPS+ LAGDFNS PGD
Subjt:  ARFKTSVSERFECTPSVPLAGDFNSNPGD
AT1G31500.4 DNAse I-like superfamily protein2.0e-0672.41Show/hide
Query:  ARFKTSVSERFECTPSVPLAGDFNSNPGD
        A+FKT +S+ FECTPS+ LAGDFNS PGD
Subjt:  ARFKTSVSERFECTPSVPLAGDFNSNPGD

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTACAGTACAATCACCAAAGCATCCGAAGTTTATTTCCGAGGAAGGGGCTGACATTTACTCTAGAAGTAAACCTGATGCTCGATTCAAGACATCAGTGTCTGAAAG
GTTTGAATGCACACCCTCAGTACCTTTGGCTGGTGACTTCAATTCAAACCCTGGGGAC
mRNA sequenceShow/hide mRNA sequence
TTTTTCTTCTTTTTACGTTCTATACTGCCAGAAATATCATACGTAACATGAGTACAGTACAATCACCAAAGCATCCGAAGTTTATTTCCGAGGAAGGGGCTGACATTTAC
TCTAGAAGTAAACCTGATGCTCGATTCAAGACATCAGTGTCTGAAAGGTTTGAATGCACACCCTCAGTACCTTTGGCTGGTGACTTCAATTCAAACCCTGGGGAC
Protein sequenceShow/hide protein sequence
MSTVQSPKHPKFISEEGADIYSRSKPDARFKTSVSERFECTPSVPLAGDFNSNPGD