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Carg00297 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg00297
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionNDR1/HIN1-like protein 12
Genome locationCarg_Chr04:6477139..6477744
RNA-Seq ExpressionCarg00297
SyntenyCarg00297
Gene Ontology termsGO:0006886 - intracellular protein transport (biological process)
GO:0006898 - receptor-mediated endocytosis (biological process)
GO:0005794 - Golgi apparatus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0030124 - AP-4 adaptor complex (cellular component)
GO:0140312 - cargo adaptor activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7024719.1 hypothetical protein SDJN02_13537, partial [Cucurbita argyrosperma subsp. argyrosperma]4.6e-10393.53Show/hide
Query:  MPPNFLSSLKRHTHPLIWIAGIICAAIALAVIIAGIVIFIGYVTIRPRVPTISVTDGHLDRIRSSRTGLLEVQMKIVVRAENQNARAHASFSHTDFVLIF
        MPPNFLSSLKRHTHPLIWIAGIICA IA+AVIIAGIVIFIGYVTIRP VP+ISVTDGHLDRIR+SR GLLEVQMKIVVRAENQNARA ASFSHTDFVLIF
Subjt:  MPPNFLSSLKRHTHPLIWIAGIICAAIALAVIIAGIVIFIGYVTIRPRVPTISVTDGHLDRIRSSRTGLLEVQMKIVVRAENQNARAHASFSHTDFVLIF

Query:  DGIEIASLVAHRPFKVNKMSYLDLHFLVESSAIPLNPTQMQHLGWSLKRNLMQFDLKGSSRTRWRVGVLGPLKFWCRLNCHLRFYPRNGSYIPAPCSSRD
        DGIEIASLVAHRPFKVNKMSYLDLHFLVESSAIPLNP QMQHL WSL RNLMQFDLKGSSRTRWRVGVLGPLKFWC+LNC LRFYPRNGSYIPAPCSS+D
Subjt:  DGIEIASLVAHRPFKVNKMSYLDLHFLVESSAIPLNPTQMQHLGWSLKRNLMQFDLKGSSRTRWRVGVLGPLKFWCRLNCHLRFYPRNGSYIPAPCSSRD

Query:  K
        K
Subjt:  K

XP_022135525.1 uncharacterized protein LOC111007456 [Momordica charantia]1.0e-10293.03Show/hide
Query:  MPPNFLSSLKRHTHPLIWIAGIICAAIALAVIIAGIVIFIGYVTIRPRVPTISVTDGHLDRIRSSRTGLLEVQMKIVVRAENQNARAHASFSHTDFVLIF
        MPP FLSSLKRHTHPLIWIAGIICA IALAVII GIVIFIGYVTIRPRVP+ISVTDGHLDRIRSSRTGLLEVQMKIVVRAENQNA+AHASFS TDFVLIF
Subjt:  MPPNFLSSLKRHTHPLIWIAGIICAAIALAVIIAGIVIFIGYVTIRPRVPTISVTDGHLDRIRSSRTGLLEVQMKIVVRAENQNARAHASFSHTDFVLIF

Query:  DGIEIASLVAHRPFKVNKMSYLDLHFLVESSAIPLNPTQMQHLGWSLKRNLMQFDLKGSSRTRWRVGVLGPLKFWCRLNCHLRFYPRNGSYIPAPCSSRD
        DGIEIASLVA RPFKV+KMSYLDLHFLVESSAIPLNPTQM HL WSLKRNLMQFDLKGSSRTRWRVGVLGPLKFWCRLNCHLRF+PRNGSY+PAPCSS+ 
Subjt:  DGIEIASLVAHRPFKVNKMSYLDLHFLVESSAIPLNPTQMQHLGWSLKRNLMQFDLKGSSRTRWRVGVLGPLKFWCRLNCHLRFYPRNGSYIPAPCSSRD

Query:  K
        K
Subjt:  K

XP_022937013.1 uncharacterized protein LOC111443437 [Cucurbita moschata]5.9e-10393.53Show/hide
Query:  MPPNFLSSLKRHTHPLIWIAGIICAAIALAVIIAGIVIFIGYVTIRPRVPTISVTDGHLDRIRSSRTGLLEVQMKIVVRAENQNARAHASFSHTDFVLIF
        MPPNFLSSLKRHTHPLIWIAGIICA IA+AVIIAGIVIFIGYVTIRP VP+ISVTDGHLDRIR+SR GLLEVQMKIVVRAENQNARA ASFSHTDFVLIF
Subjt:  MPPNFLSSLKRHTHPLIWIAGIICAAIALAVIIAGIVIFIGYVTIRPRVPTISVTDGHLDRIRSSRTGLLEVQMKIVVRAENQNARAHASFSHTDFVLIF

Query:  DGIEIASLVAHRPFKVNKMSYLDLHFLVESSAIPLNPTQMQHLGWSLKRNLMQFDLKGSSRTRWRVGVLGPLKFWCRLNCHLRFYPRNGSYIPAPCSSRD
        DGIEIASLVAHRPFKVNKMSYLDLHFLVESSAIPLNP QMQHL WSL RNLMQFDLKGSSRTRWRVGVLGPLKFWC LNC LRFYPRNGSYIPAPCSS+D
Subjt:  DGIEIASLVAHRPFKVNKMSYLDLHFLVESSAIPLNPTQMQHLGWSLKRNLMQFDLKGSSRTRWRVGVLGPLKFWCRLNCHLRFYPRNGSYIPAPCSSRD

Query:  K
        K
Subjt:  K

XP_022940744.1 uncharacterized protein LOC111446247 [Cucurbita moschata]1.0e-110100Show/hide
Query:  MPPNFLSSLKRHTHPLIWIAGIICAAIALAVIIAGIVIFIGYVTIRPRVPTISVTDGHLDRIRSSRTGLLEVQMKIVVRAENQNARAHASFSHTDFVLIF
        MPPNFLSSLKRHTHPLIWIAGIICAAIALAVIIAGIVIFIGYVTIRPRVPTISVTDGHLDRIRSSRTGLLEVQMKIVVRAENQNARAHASFSHTDFVLIF
Subjt:  MPPNFLSSLKRHTHPLIWIAGIICAAIALAVIIAGIVIFIGYVTIRPRVPTISVTDGHLDRIRSSRTGLLEVQMKIVVRAENQNARAHASFSHTDFVLIF

Query:  DGIEIASLVAHRPFKVNKMSYLDLHFLVESSAIPLNPTQMQHLGWSLKRNLMQFDLKGSSRTRWRVGVLGPLKFWCRLNCHLRFYPRNGSYIPAPCSSRD
        DGIEIASLVAHRPFKVNKMSYLDLHFLVESSAIPLNPTQMQHLGWSLKRNLMQFDLKGSSRTRWRVGVLGPLKFWCRLNCHLRFYPRNGSYIPAPCSSRD
Subjt:  DGIEIASLVAHRPFKVNKMSYLDLHFLVESSAIPLNPTQMQHLGWSLKRNLMQFDLKGSSRTRWRVGVLGPLKFWCRLNCHLRFYPRNGSYIPAPCSSRD

Query:  K
        K
Subjt:  K

XP_038896622.1 uncharacterized protein LOC120084885 [Benincasa hispida]2.6e-10695.52Show/hide
Query:  MPPNFLSSLKRHTHPLIWIAGIICAAIALAVIIAGIVIFIGYVTIRPRVPTISVTDGHLDRIRSSRTGLLEVQMKIVVRAENQNARAHASFSHTDFVLIF
        MPPNFLSS+KRHTHPLIWIAGIICA IALAVIIAGIVIFIGYVTIRPRVP+ISVTDGHLDRIRSSRTGLLEVQMKIVVRAENQNARAHASFS TDFVL+F
Subjt:  MPPNFLSSLKRHTHPLIWIAGIICAAIALAVIIAGIVIFIGYVTIRPRVPTISVTDGHLDRIRSSRTGLLEVQMKIVVRAENQNARAHASFSHTDFVLIF

Query:  DGIEIASLVAHRPFKVNKMSYLDLHFLVESSAIPLNPTQMQHLGWSLKRNLMQFDLKGSSRTRWRVGVLGPLKFWCRLNCHLRFYPRNGSYIPAPCSSRD
        DGIEIASLVAHRPFKVNKMSYLDLHFLVESSAIPLNPTQMQHL WSLKR+LMQFDLKGSSRTRWRVG+LGPLKFWCRLNCHLRFYPRNGSYIPAPCSSR 
Subjt:  DGIEIASLVAHRPFKVNKMSYLDLHFLVESSAIPLNPTQMQHLGWSLKRNLMQFDLKGSSRTRWRVGVLGPLKFWCRLNCHLRFYPRNGSYIPAPCSSRD

Query:  K
        K
Subjt:  K

TrEMBL top hitse value%identityAlignment
A0A5D3BSN8 NDR1/HIN1-like protein 128.4e-10392.54Show/hide
Query:  MPPNFLSSLKRHTHPLIWIAGIICAAIALAVIIAGIVIFIGYVTIRPRVPTISVTDGHLDRIRSSRTGLLEVQMKIVVRAENQNARAHASFSHTDFVLIF
        MPPNFLSSLKRHTHPLIWIAGIICA IALAVI+AGIVIFIGYVTIRPRVP+ISVTDGHLDRIRSSRTGLLEVQMKIVVRAENQNA+AHASFS TDFVL+F
Subjt:  MPPNFLSSLKRHTHPLIWIAGIICAAIALAVIIAGIVIFIGYVTIRPRVPTISVTDGHLDRIRSSRTGLLEVQMKIVVRAENQNARAHASFSHTDFVLIF

Query:  DGIEIASLVAHRPFKVNKMSYLDLHFLVESSAIPLNPTQMQHLGWSLKRNLMQFDLKGSSRTRWRVGVLGPLKFWCRLNCHLRFYPRNGSYIPAPCSSRD
        DGIEIASLVAHRPFKVNKMSYLDLHFLVESSAIPL+ TQMQHL WSLKRNL+QFDLKGSSRTRWRVG+LGPLKFWCRLNCHLRF PRNGSYIP PCSS  
Subjt:  DGIEIASLVAHRPFKVNKMSYLDLHFLVESSAIPLNPTQMQHLGWSLKRNLMQFDLKGSSRTRWRVGVLGPLKFWCRLNCHLRFYPRNGSYIPAPCSSRD

Query:  K
        K
Subjt:  K

A0A6J1C199 uncharacterized protein LOC1110074564.9e-10393.03Show/hide
Query:  MPPNFLSSLKRHTHPLIWIAGIICAAIALAVIIAGIVIFIGYVTIRPRVPTISVTDGHLDRIRSSRTGLLEVQMKIVVRAENQNARAHASFSHTDFVLIF
        MPP FLSSLKRHTHPLIWIAGIICA IALAVII GIVIFIGYVTIRPRVP+ISVTDGHLDRIRSSRTGLLEVQMKIVVRAENQNA+AHASFS TDFVLIF
Subjt:  MPPNFLSSLKRHTHPLIWIAGIICAAIALAVIIAGIVIFIGYVTIRPRVPTISVTDGHLDRIRSSRTGLLEVQMKIVVRAENQNARAHASFSHTDFVLIF

Query:  DGIEIASLVAHRPFKVNKMSYLDLHFLVESSAIPLNPTQMQHLGWSLKRNLMQFDLKGSSRTRWRVGVLGPLKFWCRLNCHLRFYPRNGSYIPAPCSSRD
        DGIEIASLVA RPFKV+KMSYLDLHFLVESSAIPLNPTQM HL WSLKRNLMQFDLKGSSRTRWRVGVLGPLKFWCRLNCHLRF+PRNGSY+PAPCSS+ 
Subjt:  DGIEIASLVAHRPFKVNKMSYLDLHFLVESSAIPLNPTQMQHLGWSLKRNLMQFDLKGSSRTRWRVGVLGPLKFWCRLNCHLRFYPRNGSYIPAPCSSRD

Query:  K
        K
Subjt:  K

A0A6J1FEV3 uncharacterized protein LOC1114434372.9e-10393.53Show/hide
Query:  MPPNFLSSLKRHTHPLIWIAGIICAAIALAVIIAGIVIFIGYVTIRPRVPTISVTDGHLDRIRSSRTGLLEVQMKIVVRAENQNARAHASFSHTDFVLIF
        MPPNFLSSLKRHTHPLIWIAGIICA IA+AVIIAGIVIFIGYVTIRP VP+ISVTDGHLDRIR+SR GLLEVQMKIVVRAENQNARA ASFSHTDFVLIF
Subjt:  MPPNFLSSLKRHTHPLIWIAGIICAAIALAVIIAGIVIFIGYVTIRPRVPTISVTDGHLDRIRSSRTGLLEVQMKIVVRAENQNARAHASFSHTDFVLIF

Query:  DGIEIASLVAHRPFKVNKMSYLDLHFLVESSAIPLNPTQMQHLGWSLKRNLMQFDLKGSSRTRWRVGVLGPLKFWCRLNCHLRFYPRNGSYIPAPCSSRD
        DGIEIASLVAHRPFKVNKMSYLDLHFLVESSAIPLNP QMQHL WSL RNLMQFDLKGSSRTRWRVGVLGPLKFWC LNC LRFYPRNGSYIPAPCSS+D
Subjt:  DGIEIASLVAHRPFKVNKMSYLDLHFLVESSAIPLNPTQMQHLGWSLKRNLMQFDLKGSSRTRWRVGVLGPLKFWCRLNCHLRFYPRNGSYIPAPCSSRD

Query:  K
        K
Subjt:  K

A0A6J1FL61 uncharacterized protein LOC1114462474.9e-111100Show/hide
Query:  MPPNFLSSLKRHTHPLIWIAGIICAAIALAVIIAGIVIFIGYVTIRPRVPTISVTDGHLDRIRSSRTGLLEVQMKIVVRAENQNARAHASFSHTDFVLIF
        MPPNFLSSLKRHTHPLIWIAGIICAAIALAVIIAGIVIFIGYVTIRPRVPTISVTDGHLDRIRSSRTGLLEVQMKIVVRAENQNARAHASFSHTDFVLIF
Subjt:  MPPNFLSSLKRHTHPLIWIAGIICAAIALAVIIAGIVIFIGYVTIRPRVPTISVTDGHLDRIRSSRTGLLEVQMKIVVRAENQNARAHASFSHTDFVLIF

Query:  DGIEIASLVAHRPFKVNKMSYLDLHFLVESSAIPLNPTQMQHLGWSLKRNLMQFDLKGSSRTRWRVGVLGPLKFWCRLNCHLRFYPRNGSYIPAPCSSRD
        DGIEIASLVAHRPFKVNKMSYLDLHFLVESSAIPLNPTQMQHLGWSLKRNLMQFDLKGSSRTRWRVGVLGPLKFWCRLNCHLRFYPRNGSYIPAPCSSRD
Subjt:  DGIEIASLVAHRPFKVNKMSYLDLHFLVESSAIPLNPTQMQHLGWSLKRNLMQFDLKGSSRTRWRVGVLGPLKFWCRLNCHLRFYPRNGSYIPAPCSSRD

Query:  K
        K
Subjt:  K

A0A6J1IKM1 uncharacterized protein LOC1114771021.1e-10292.54Show/hide
Query:  MPPNFLSSLKRHTHPLIWIAGIICAAIALAVIIAGIVIFIGYVTIRPRVPTISVTDGHLDRIRSSRTGLLEVQMKIVVRAENQNARAHASFSHTDFVLIF
        MPPNFLSSLKRHTHPLIWIAGIICA IALAVIIAGIVIFIGYVT RP VP+ISVTDGHLDRIR+SR GLLEVQMK+VVRAENQNAR  A FSHTDFVLIF
Subjt:  MPPNFLSSLKRHTHPLIWIAGIICAAIALAVIIAGIVIFIGYVTIRPRVPTISVTDGHLDRIRSSRTGLLEVQMKIVVRAENQNARAHASFSHTDFVLIF

Query:  DGIEIASLVAHRPFKVNKMSYLDLHFLVESSAIPLNPTQMQHLGWSLKRNLMQFDLKGSSRTRWRVGVLGPLKFWCRLNCHLRFYPRNGSYIPAPCSSRD
        DGIEIASLVAHRPFKVNKMSYLDLHFLVESSAIPLNP QMQHL WSL RNLMQFDLKGSSRTRWRVGVLGPLKFWC LNCHLRFYPRNGSYIPAPCSS+D
Subjt:  DGIEIASLVAHRPFKVNKMSYLDLHFLVESSAIPLNPTQMQHLGWSLKRNLMQFDLKGSSRTRWRVGVLGPLKFWCRLNCHLRFYPRNGSYIPAPCSSRD

Query:  K
        K
Subjt:  K

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G13050.1 unknown protein6.3e-1025.43Show/hide
Query:  RHTHPLIWIAGIICAAIALAVIIAGIVIFIGYVTIRPRVPTISVTDGHLDRIRSSRTGLLEVQMKIVVRAENQNARAHASFSHTDFVLIFDGIEIASLVA
        + T P+   A I CA + + +I++G+++ + Y+  RPR P   ++   L+        +L   + +VV   N + ++   FS+  F L F    IA+   
Subjt:  RHTHPLIWIAGIICAAIALAVIIAGIVIFIGYVTIRPRVPTISVTDGHLDRIRSSRTGLLEVQMKIVVRAENQNARAHASFSHTDFVLIFDGIEIASLVA

Query:  H-RPFKVNKMSYLDLHFLVESSAIPLNPTQMQHLGWSLKRNLMQFDLKGSSRTRWRVGVLGPLKFWCRLNCHL
        H  PF V K   +   F + SS + +   Q Q L   L    +  +L+G+   R  +G L    +W    C +
Subjt:  H-RPFKVNKMSYLDLHFLVESSAIPLNPTQMQHLGWSLKRNLMQFDLKGSSRTRWRVGVLGPLKFWCRLNCHL

AT1G13050.2 unknown protein7.0e-0925.61Show/hide
Query:  AGIICAAIALAVIIAGIVIFIGYVTIRPRVPTISVTDGHLDRIRSSRTGLLEVQMKIVVRAENQNARAHASFSHTDFVLIFDGIEIASLVAH-RPFKVNK
        A I CA + + +I++G+++ + Y+  RPR P   ++   L+        +L   + +VV   N + ++   FS+  F L F    IA+   H  PF V K
Subjt:  AGIICAAIALAVIIAGIVIFIGYVTIRPRVPTISVTDGHLDRIRSSRTGLLEVQMKIVVRAENQNARAHASFSHTDFVLIFDGIEIASLVAH-RPFKVNK

Query:  MSYLDLHFLVESSAIPLNPTQMQHLGWSLKRNLMQFDLKGSSRTRWRVGVLGPLKFWCRLNCHL
           +   F + SS + +   Q Q L   L    +  +L+G+   R  +G L    +W    C +
Subjt:  MSYLDLHFLVESSAIPLNPTQMQHLGWSLKRNLMQFDLKGSSRTRWRVGVLGPLKFWCRLNCHL

AT5G45320.1 FUNCTIONS IN: molecular_function unknown1.9e-5152.08Show/hide
Query:  RH-THPLIWIAGIICAAIALAVIIAGIVIFIGYVTIRPRVPTISVTDGHLDRIRSSRTGLLEVQMKIVVRAENQNARAHASFSHTDFVLIFDGIEIASLV
        RH T P IW A IICA I++ VI+ GI++F+GY+ I PRVP ISV D HLD ++    G+L+ Q+ IV+R EN NA+AHA F  T+F L ++G  IA L 
Subjt:  RH-THPLIWIAGIICAAIALAVIIAGIVIFIGYVTIRPRVPTISVTDGHLDRIRSSRTGLLEVQMKIVVRAENQNARAHASFSHTDFVLIFDGIEIASLV

Query:  AHRPFKVNKMSYLDLHFLVESSAIPLNPTQMQHLGWSLKRNLMQFDLKGSSRTRWRVGVLGPLKFWCRLNCHLRFYPRNGSYIPAPCSSRDK
        A   F+V K   + L +LV+S  IPLNPT MQ + +++K++++ F+LKG SRTRWRVG LG +KF C L+C LRF P + SYIP+PC+S  K
Subjt:  AHRPFKVNKMSYLDLHFLVESSAIPLNPTQMQHLGWSLKRNLMQFDLKGSSRTRWRVGVLGPLKFWCRLNCHLRFYPRNGSYIPAPCSSRDK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCACCAAATTTCCTATCCAGCCTAAAGCGGCATACTCATCCCCTGATTTGGATTGCCGGCATAATCTGTGCTGCCATAGCCCTAGCAGTTATAATCGCAGGCATCGT
CATCTTCATCGGCTATGTAACGATCCGCCCTAGGGTGCCTACAATCAGCGTAACCGACGGACATCTCGACAGAATCCGAAGCAGCAGAACCGGCTTGCTTGAAGTCCAGA
TGAAGATCGTCGTCCGAGCCGAGAATCAAAATGCTAGAGCACACGCAAGCTTCTCACATACCGATTTCGTCCTTATCTTCGACGGCATAGAAATCGCATCACTGGTGGCT
CACCGACCGTTCAAAGTGAACAAAATGAGTTACCTGGATTTGCACTTCTTAGTGGAATCGTCGGCGATTCCGCTAAATCCAACGCAGATGCAGCATCTAGGCTGGTCGCT
GAAGAGGAATCTGATGCAGTTCGATCTGAAAGGAAGCTCGAGAACTCGATGGAGAGTTGGAGTTCTTGGACCGCTGAAGTTTTGGTGCCGTTTGAACTGCCATCTCAGGT
TTTACCCGCGCAATGGAAGCTACATTCCCGCGCCCTGTTCTTCGAGGGATAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCACCAAATTTCCTATCCAGCCTAAAGCGGCATACTCATCCCCTGATTTGGATTGCCGGCATAATCTGTGCTGCCATAGCCCTAGCAGTTATAATCGCAGGCATCGT
CATCTTCATCGGCTATGTAACGATCCGCCCTAGGGTGCCTACAATCAGCGTAACCGACGGACATCTCGACAGAATCCGAAGCAGCAGAACCGGCTTGCTTGAAGTCCAGA
TGAAGATCGTCGTCCGAGCCGAGAATCAAAATGCTAGAGCACACGCAAGCTTCTCACATACCGATTTCGTCCTTATCTTCGACGGCATAGAAATCGCATCACTGGTGGCT
CACCGACCGTTCAAAGTGAACAAAATGAGTTACCTGGATTTGCACTTCTTAGTGGAATCGTCGGCGATTCCGCTAAATCCAACGCAGATGCAGCATCTAGGCTGGTCGCT
GAAGAGGAATCTGATGCAGTTCGATCTGAAAGGAAGCTCGAGAACTCGATGGAGAGTTGGAGTTCTTGGACCGCTGAAGTTTTGGTGCCGTTTGAACTGCCATCTCAGGT
TTTACCCGCGCAATGGAAGCTACATTCCCGCGCCCTGTTCTTCGAGGGATAAGTAA
Protein sequenceShow/hide protein sequence
MPPNFLSSLKRHTHPLIWIAGIICAAIALAVIIAGIVIFIGYVTIRPRVPTISVTDGHLDRIRSSRTGLLEVQMKIVVRAENQNARAHASFSHTDFVLIFDGIEIASLVA
HRPFKVNKMSYLDLHFLVESSAIPLNPTQMQHLGWSLKRNLMQFDLKGSSRTRWRVGVLGPLKFWCRLNCHLRFYPRNGSYIPAPCSSRDK