CuGenDBv2

Gene ID	Carg00300
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	protein MODIFYING WALL LIGNIN-2-like
Genome location	Carg_Chr04:6498093..6500059
RNA-Seq Expression	Carg00300
Synteny	Carg00300
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR009606 - Modifying wall lignin-1/2

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6608021.1 Protein MODIFYING WALL LIGNIN-1, partial [Cucurbita argyrosperma subsp. sororia]

1.7e-63

77.78

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Query:  MEKPPSSFFVIGFSIVATLTLASFASCMAAEFNRTSKKDLKLNGRFCFLPESEAFKLGVAAIGQRRIERVAVS-------------KGLSFQPPFSS---
        MEKPPSSFFVIGFSIVATLTLASFASCMAAEFNRTSKKDLKLNGRFCFLPESEAFKLGVA +    + ++  +             K  S + P  S   
Subjt:  MEKPPSSFFVIGFSIVATLTLASFASCMAAEFNRTSKKDLKLNGRFCFLPESEAFKLGVAAIGQRRIERVAVS-------------KGLSFQPPFSS---

Query:  -LGQASFGIAVVMMSGAISMSSRQEYGKGWVEGECYVVKDRIFVGAALLILINGASTIFSAAIARKSHPKGPTQINSQIR
         +  ASFGIAVVMMSGAISMSSRQEYGKGWVEGECYVVKDRIFVGAALLILINGASTIFSAAIARKSHPKGPTQINSQIR
Subjt:  -LGQASFGIAVVMMSGAISMSSRQEYGKGWVEGECYVVKDRIFVGAALLILINGASTIFSAAIARKSHPKGPTQINSQIR

KAG7031643.1 hypothetical protein SDJN02_05684, partial [Cucurbita argyrosperma subsp. argyrosperma]

1.2e-82

100

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Query:  MEKPPSSFFVIGFSIVATLTLASFASCMAAEFNRTSKKDLKLNGRFCFLPESEAFKLGVAAIGQRRIERVAVSKGLSFQPPFSSLGQASFGIAVVMMSGA
        MEKPPSSFFVIGFSIVATLTLASFASCMAAEFNRTSKKDLKLNGRFCFLPESEAFKLGVAAIGQRRIERVAVSKGLSFQPPFSSLGQASFGIAVVMMSGA
Subjt:  MEKPPSSFFVIGFSIVATLTLASFASCMAAEFNRTSKKDLKLNGRFCFLPESEAFKLGVAAIGQRRIERVAVSKGLSFQPPFSSLGQASFGIAVVMMSGA

Query:  ISMSSRQEYGKGWVEGECYVVKDRIFVGAALLILINGASTIFSAAIARKSHPKGPTQINSQIR
        ISMSSRQEYGKGWVEGECYVVKDRIFVGAALLILINGASTIFSAAIARKSHPKGPTQINSQIR
Subjt:  ISMSSRQEYGKGWVEGECYVVKDRIFVGAALLILINGASTIFSAAIARKSHPKGPTQINSQIR

XP_022937014.1 uncharacterized protein LOC111443438 [Cucurbita moschata]

1.4e-49

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Query:  MEKPPSSFFVIGFSIVATLTLASFASCMAAEFNRTSKKDLKLNGRFCFLPESEAFKLGVAAIGQRRIERVAVS-------------KGLSFQPPFSS---
        MEKPPSS FVI FSIVA LTLASFASCMAAEFNRT KKDLKLNGRFCFLPESEAFKLGVA I    +  +  +             K  S + P  S   
Subjt:  MEKPPSSFFVIGFSIVATLTLASFASCMAAEFNRTSKKDLKLNGRFCFLPESEAFKLGVAAIGQRRIERVAVS-------------KGLSFQPPFSS---

Query:  -LGQASFGIAVVMMSGAISMSSRQEYGKGWVEGECYVVKDRIFVGAALLILINGASTIFSAAIARKSHPKGPTQINSQIR
         +   SFGIAV MM GA SMS RQEYGKGWVEGECY+VKD +FVGAALL+LING STI SAAI R+   KGP Q+++QIR
Subjt:  -LGQASFGIAVVMMSGAISMSSRQEYGKGWVEGECYVVKDRIFVGAALLILINGASTIFSAAIARKSHPKGPTQINSQIR

XP_022940987.1 uncharacterized protein LOC111446405 [Cucurbita moschata]

5.4e-62

76.11

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Query:  MEKPPSSFFVIGFSIVATLTLASFASCMAAEFNRTSKKDLKLNGRFCFLPESEAFKLGVAAIGQRRIERVAVS-------------KGLSFQPPFSS---
        MEKPPSSFFVIGFSIVATLTLASFASCMAAEFNRTSKKDLKLNGRFCFLPESEAFKLGVA +    + ++  +             K  S + P  S   
Subjt:  MEKPPSSFFVIGFSIVATLTLASFASCMAAEFNRTSKKDLKLNGRFCFLPESEAFKLGVAAIGQRRIERVAVS-------------KGLSFQPPFSS---

Query:  -LGQASFGIAVVMMSGAISMSSRQEYGKGWVEGECYVVKDRIFVGAALLILINGASTIFSAAIARKSHPKGPTQINSQIR
         +  ASFGIAVVMMSGAISMSSRQEYGKGWVEGECYVVKDRIFVGAALL+LINGASTI SAAI RKSHPKGPTQINSQIR
Subjt:  -LGQASFGIAVVMMSGAISMSSRQEYGKGWVEGECYVVKDRIFVGAALLILINGASTIFSAAIARKSHPKGPTQINSQIR

XP_023535227.1 uncharacterized protein LOC111796718 [Cucurbita pepo subsp. pepo]

5.2e-49

64.8

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Query:  MEKPPSSFFVIGFSIVATLTLASFASCMAAEFNRTSKKDLKLNGRFCFLPESEAFKLGVAAIGQRRIERVAVS-------------KGLSFQPPFSS---
        MEKPPSS FVI FSIVA LTLASFASCMAAEFNRT KKDLKLNGRFCFLPESEAFKLGVA I    +  +  +             K  S + P  S   
Subjt:  MEKPPSSFFVIGFSIVATLTLASFASCMAAEFNRTSKKDLKLNGRFCFLPESEAFKLGVAAIGQRRIERVAVS-------------KGLSFQPPFSS---

Query:  -LGQASFGIAVVMMSGAISMSSRQEYGKGWVEGECYVVKDRIFVGAALLILINGASTIFSAAIARKSHPKGPTQINSQI
         +   SFGIAV MM GA SMS RQEYGKGWVEGECY+VKD +FVGAALL+LING STI SAAI R+   KGP Q+++QI
Subjt:  -LGQASFGIAVVMMSGAISMSSRQEYGKGWVEGECYVVKDRIFVGAALLILINGASTIFSAAIARKSHPKGPTQINSQI

TrEMBL top hits

e value

%identity

Alignment

A0A6J1CC41 uncharacterized protein LOC111010123 isoform X1

4.8e-48

64.25

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Query:  MEKPPSSFFVIGFSIVATLTLASFASCMAAEFNRTSKKDLKLNGRFCFLPESEAFKLGVAAIGQRRIERVAVS-------------KGLSFQPPFSS---
        MEK PS  F I FSIVA LTL SFASCMAAEFNRT KKDLKL+GRFCFLPESEAFKLGVA++    + ++  +             K  S + P  S   
Subjt:  MEKPPSSFFVIGFSIVATLTLASFASCMAAEFNRTSKKDLKLNGRFCFLPESEAFKLGVAAIGQRRIERVAVS-------------KGLSFQPPFSS---

Query:  -LGQASFGIAVVMMSGAISMSSRQEYGKGWVEGECYVVKDRIFVGAALLILINGASTIFSAAIARKSHPKGPTQINSQI
         +   SFGIAV MMSGA SMS RQEYGKGWVEGECYVVKD IFVGAALL+LING STI SAAI R+SH  GP+QI++QI
Subjt:  -LGQASFGIAVVMMSGAISMSSRQEYGKGWVEGECYVVKDRIFVGAALLILINGASTIFSAAIARKSHPKGPTQINSQI

A0A6J1CD79 uncharacterized protein LOC111010123 isoform X2

1.2e-46

64.25

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Query:  MEKPPSSFFVIGFSIVATLTLASFASCMAAEFNRTSKKDLKLNGRFCFLPESEAFKLGVAAIGQRRIERVAVS-------------KGLSFQPPFSS---
        MEK PS  F I FSIVA LTL SFASCMAAEFNRT KKDLKL+GRFCFLPESEAFKLGVA++    + ++  +             K  S + P  S   
Subjt:  MEKPPSSFFVIGFSIVATLTLASFASCMAAEFNRTSKKDLKLNGRFCFLPESEAFKLGVAAIGQRRIERVAVS-------------KGLSFQPPFSS---

Query:  -LGQASFGIAVVMMSGAISMSSRQEYGKGWVEGECYVVKDRIFVGAALLILINGASTIFSAAIARKSHPKGPTQINSQI
         +   SFGIAV MMSGA SMS RQEYGKGWVEGECYVVKD IFVGAALL+LING STI SAAI R+SH  GP+QI++QI
Subjt:  -LGQASFGIAVVMMSGAISMSSRQEYGKGWVEGECYVVKDRIFVGAALLILINGASTIFSAAIARKSHPKGPTQINSQI

A0A6J1F9Y8 uncharacterized protein LOC111443438

6.7e-50

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Query:  MEKPPSSFFVIGFSIVATLTLASFASCMAAEFNRTSKKDLKLNGRFCFLPESEAFKLGVAAIGQRRIERVAVS-------------KGLSFQPPFSS---
        MEKPPSS FVI FSIVA LTLASFASCMAAEFNRT KKDLKLNGRFCFLPESEAFKLGVA I    +  +  +             K  S + P  S   
Subjt:  MEKPPSSFFVIGFSIVATLTLASFASCMAAEFNRTSKKDLKLNGRFCFLPESEAFKLGVAAIGQRRIERVAVS-------------KGLSFQPPFSS---

Query:  -LGQASFGIAVVMMSGAISMSSRQEYGKGWVEGECYVVKDRIFVGAALLILINGASTIFSAAIARKSHPKGPTQINSQIR
         +   SFGIAV MM GA SMS RQEYGKGWVEGECY+VKD +FVGAALL+LING STI SAAI R+   KGP Q+++QIR
Subjt:  -LGQASFGIAVVMMSGAISMSSRQEYGKGWVEGECYVVKDRIFVGAALLILINGASTIFSAAIARKSHPKGPTQINSQIR

A0A6J1FQT7 uncharacterized protein LOC111446405

2.6e-62

76.11

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Query:  MEKPPSSFFVIGFSIVATLTLASFASCMAAEFNRTSKKDLKLNGRFCFLPESEAFKLGVAAIGQRRIERVAVS-------------KGLSFQPPFSS---
        MEKPPSSFFVIGFSIVATLTLASFASCMAAEFNRTSKKDLKLNGRFCFLPESEAFKLGVA +    + ++  +             K  S + P  S   
Subjt:  MEKPPSSFFVIGFSIVATLTLASFASCMAAEFNRTSKKDLKLNGRFCFLPESEAFKLGVAAIGQRRIERVAVS-------------KGLSFQPPFSS---

Query:  -LGQASFGIAVVMMSGAISMSSRQEYGKGWVEGECYVVKDRIFVGAALLILINGASTIFSAAIARKSHPKGPTQINSQIR
         +  ASFGIAVVMMSGAISMSSRQEYGKGWVEGECYVVKDRIFVGAALL+LINGASTI SAAI RKSHPKGPTQINSQIR
Subjt:  -LGQASFGIAVVMMSGAISMSSRQEYGKGWVEGECYVVKDRIFVGAALLILINGASTIFSAAIARKSHPKGPTQINSQIR

A0A6J1II23 uncharacterized protein LOC111477105

1.3e-48

63.69

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Query:  MEKPPSSFFVIGFSIVATLTLASFASCMAAEFNRTSKKDLKLNGRFCFLPESEAFKLGVAAIGQRRIERVAVS-------------KGLSFQPPFSS---
        ME PPSS FVI FSIVA LTLASFASCMAAEFNRT KKDLKLNGRFCFLPESEAFKLGVA I    +  +  +             K  S + P  +   
Subjt:  MEKPPSSFFVIGFSIVATLTLASFASCMAAEFNRTSKKDLKLNGRFCFLPESEAFKLGVAAIGQRRIERVAVS-------------KGLSFQPPFSS---

Query:  LGQASFGIAVVMMSGAISMSSRQEYGKGWVEGECYVVKDRIFVGAALLILINGASTIFSAAIARKSHPKGPTQINSQIR
        +   SFGIAV M+ GA SMS RQEYGKGWVEGECY+VKD +FVGAALL+LING STI SAAI R+   KGP Q+++QIR
Subjt:  LGQASFGIAVVMMSGAISMSSRQEYGKGWVEGECYVVKDRIFVGAALLILINGASTIFSAAIARKSHPKGPTQINSQIR

SwissProt top hits

e value

%identity

Alignment

A2RVU1 Protein MODIFYING WALL LIGNIN-1

6.3e-13

31.33

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Query:  LASFASCMAAEFNRTSK----------KDLKLNGRFCFLPESEAFKLGVAAI----GQRRIERVAVSKGLS---------FQPPFSSLGQASFGIAVVMM
        LA+F  C++AEF +             KDLK +G  C+LPE+ AF LG+AA+      + +  V + +G +         F          +F +AV ++
Subjt:  LASFASCMAAEFNRTSK----------KDLKLNGRFCFLPESEAFKLGVAAI----GQRRIERVAVSKGLS---------FQPPFSSLGQASFGIAVVMM

Query:  SGAISMSSRQEYGKGWVEGECYVVKDRIFVGAALLILINGASTIFSAAIARK------SHPKGPTQ
        S   SM+  Q YGKGW+  ECY+VKD +F  +  L +   A+ + + A   K      +H K  TQ
Subjt:  SGAISMSSRQEYGKGWVEGECYVVKDRIFVGAALLILINGASTIFSAAIARK------SHPKGPTQ

O65708 Protein MODIFYING WALL LIGNIN-2

3.0e-15

35.44

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Query:  FSIVATLTLASFASCMAAEFNRTSKKDLKLN-GRFCFLPESEAFKLGVAAI-----------------GQRRIERVAVSK--GLSFQPPFSSLGQASFGI
        +S+V +L L SF +C AAEF RT K+D++ +  R C++P S AF LG AA+                  + R +R    K   L+       L  ++F +
Subjt:  FSIVATLTLASFASCMAAEFNRTSKKDLKLN-GRFCFLPESEAFKLGVAAI-----------------GQRRIERVAVSK--GLSFQPPFSSLGQASFGI

Query:  AVVMMSGAISMSSRQEYGKGWVEGECYVVKDRIFVGAALLILIN-GASTIFSAAIARK
         V+++S AISMS  Q YG+GW++ +CY+VKD +F  +  L ++  GA TI +  I  K
Subjt:  AVVMMSGAISMSSRQEYGKGWVEGECYVVKDRIFVGAALLILIN-GASTIFSAAIARK

Arabidopsis top hits

e value

%identity

Alignment

AT1G31720.1 Protein of unknown function (DUF1218)

2.0e-14

30.77

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Query:  PSSFFVIGFSIVATLTLASFASCMAAEFNRTSK----------KDLKLNGRFCFLPESEAFKLGVAAI----GQRRIERVAVSKGLS---------FQPP
        P SF  + F  +    LA+F  C++AEF +             KDLK +G  C+LPE+ AF LG+AA+      + +  V + +G +         F   
Subjt:  PSSFFVIGFSIVATLTLASFASCMAAEFNRTSK----------KDLKLNGRFCFLPESEAFKLGVAAI----GQRRIERVAVSKGLS---------FQPP

Query:  FSSLGQASFGIAVVMMSGAISMSSRQEYGKGWVEGECYVVKDRIFVGAALLILINGASTIFSAAIARK------SHPKGPTQ
               +F +AV ++S   SM+  Q YGKGW+  ECY+VKD +F  +  L +   A+ + + A   K      +H K  TQ
Subjt:  FSSLGQASFGIAVVMMSGAISMSSRQEYGKGWVEGECYVVKDRIFVGAALLILINGASTIFSAAIARK------SHPKGPTQ

AT4G19370.1 Protein of unknown function (DUF1218)

2.1e-16

35.44

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Query:  FSIVATLTLASFASCMAAEFNRTSKKDLKLN-GRFCFLPESEAFKLGVAAI-----------------GQRRIERVAVSK--GLSFQPPFSSLGQASFGI
        +S+V +L L SF +C AAEF RT K+D++ +  R C++P S AF LG AA+                  + R +R    K   L+       L  ++F +
Subjt:  FSIVATLTLASFASCMAAEFNRTSKKDLKLN-GRFCFLPESEAFKLGVAAI-----------------GQRRIERVAVSK--GLSFQPPFSSLGQASFGI

Query:  AVVMMSGAISMSSRQEYGKGWVEGECYVVKDRIFVGAALLILIN-GASTIFSAAIARK
         V+++S AISMS  Q YG+GW++ +CY+VKD +F  +  L ++  GA TI +  I  K
Subjt:  AVVMMSGAISMSSRQEYGKGWVEGECYVVKDRIFVGAALLILIN-GASTIFSAAIARK

Sequences

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CDS sequence

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ATGGAAAAGCCACCATCCAGCTTCTTCGTGATAGGGTTTTCCATTGTTGCAACCCTCACCCTCGCCTCCTTCGCGTCATGTATGGCTGCTGAATTCAACAGAACAAGTAA
AAAGGACCTGAAATTGAACGGCAGATTCTGCTTTCTGCCTGAAAGTGAAGCATTCAAATTGGGAGTCGCAGCTATTGGCCAAAGGAGAATAGAAAGAGTTGCAGTGTCAA
AAGGCCTCTCCTTTCAACCACCCTTCTCATCTCTTGGTCAGGCCAGCTTTGGAATTGCGGTGGTAATGATGAGTGGAGCCATCAGCATGAGCAGCAGACAAGAGTATGGG
AAGGGGTGGGTGGAAGGAGAATGCTATGTGGTGAAAGACCGAATATTTGTTGGCGCGGCCCTATTGATTCTCATTAATGGGGCCTCCACCATATTCTCCGCCGCCATTGC
AAGGAAGAGCCACCCTAAAGGGCCCACTCAAATAAATTCACAAATTAGATAA

mRNA sequence

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Protein sequence

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MEKPPSSFFVIGFSIVATLTLASFASCMAAEFNRTSKKDLKLNGRFCFLPESEAFKLGVAAIGQRRIERVAVSKGLSFQPPFSSLGQASFGIAVVMMSGAISMSSRQEYG
KGWVEGECYVVKDRIFVGAALLILINGASTIFSAAIARKSHPKGPTQINSQIR

Carg00300 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome