; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg00323 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg00323
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionExtensin-like protein
Genome locationCarg_Chr04:6594754..6595242
RNA-Seq ExpressionCarg00323
SyntenyCarg00323
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608039.1 hypothetical protein SDJN03_01381, partial [Cucurbita argyrosperma subsp. sororia]2.6e-85100Show/hide
Query:  MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLHPFPTHSPQQHKKLKPPPAVTATQFHRSSNSLRTRSDRWVSSQSKLAEPEQVSVGCFSSPLPNRKASKIV
        MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLHPFPTHSPQQHKKLKPPPAVTATQFHRSSNSLRTRSDRWVSSQSKLAEPEQVSVGCFSSPLPNRKASKIV
Subjt:  MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLHPFPTHSPQQHKKLKPPPAVTATQFHRSSNSLRTRSDRWVSSQSKLAEPEQVSVGCFSSPLPNRKASKIV

Query:  NRKPEPDCASELETLPRWSVSSKKSISPFRNSVSSSPSSSLSSYQSSPRPTSDSEWAGFGLF
        NRKPEPDCASELETLPRWSVSSKKSISPFRNSVSSSPSSSLSSYQSSPRPTSDSEWAGFGLF
Subjt:  NRKPEPDCASELETLPRWSVSSKKSISPFRNSVSSSPSSSLSSYQSSPRPTSDSEWAGFGLF

XP_022940016.1 uncharacterized protein LOC111445775 [Cucurbita moschata]4.8e-7995.68Show/hide
Query:  MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLHPFPTHSPQQHKKLKPPPAVTATQFHRSSNSLRTRSDRWVSSQSKLAEPEQVSVGCFSSPLPNRKASKIV
        MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLH FPTHSPQQHKKLKPPPAVTATQFHRSSNSLRTRSDRW S+QSKLAEPEQVSVGCFSSPLPNRKASKIV
Subjt:  MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLHPFPTHSPQQHKKLKPPPAVTATQFHRSSNSLRTRSDRWVSSQSKLAEPEQVSVGCFSSPLPNRKASKIV

Query:  NRKPEPDCASELETLPRWSVSSKKSISPFRNSVSSSPSSSLSSYQSSPRPTSDSEWAGFGLF
        NRKPEPD ASELETLPRWSVSSKKSISPFRNSVS   SSSLSSYQSSPRPTSDSEWAGFGLF
Subjt:  NRKPEPDCASELETLPRWSVSSKKSISPFRNSVSSSPSSSLSSYQSSPRPTSDSEWAGFGLF

XP_022981067.1 uncharacterized protein LOC111480325 [Cucurbita maxima]3.0e-8196.32Show/hide
Query:  MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLHPFPTHSPQQHKKLKPPPAVTATQFHRSSNSLRTRSDRWVSSQSKLAEPEQVSVGCFSSPLPNRKASKIV
        MDVDEFYRQPAAVPFKWEIKPGVPRNHH LHPFPTHSPQQHKKLKPPPAVTATQFHRSSNSLRTRSDRW SSQSKLAEPEQVSVGCFSSPLPNRKA+KI+
Subjt:  MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLHPFPTHSPQQHKKLKPPPAVTATQFHRSSNSLRTRSDRWVSSQSKLAEPEQVSVGCFSSPLPNRKASKIV

Query:  NRKPEPDCASELETLPRWSVSSKKSISPFRNSVSSSPS-SSLSSYQSSPRPTSDSEWAGFGLF
        NRKPEPDCASELETLPRWS+SSKKSISPFRNSVSSSPS SSLSSYQSSPRPTSDSEWAGFGLF
Subjt:  NRKPEPDCASELETLPRWSVSSKKSISPFRNSVSSSPS-SSLSSYQSSPRPTSDSEWAGFGLF

XP_023525665.1 uncharacterized protein LOC111789202 [Cucurbita pepo subsp. pepo]6.7e-8195.68Show/hide
Query:  MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLHPFPTHSPQQHKKLKPPPAVTATQFHRSSNSLRTRSDRWVSSQSKLAEPEQVSVGCFSSPLPNRKASKIV
        MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLHPFPTHSPQQHKKLKPPPAVTATQFHRSSNSLRTRSDRW S+QSKLA+PEQV VGCFSSPLPNRKA+KIV
Subjt:  MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLHPFPTHSPQQHKKLKPPPAVTATQFHRSSNSLRTRSDRWVSSQSKLAEPEQVSVGCFSSPLPNRKASKIV

Query:  NRKPEPDCASELETLPRWSVSSKKSISPFRNSVSSSPSSSLSSYQSSPRPTSDSEWAGFGLF
        NRKPEPD ASELETLPRWSVSSKKSISPFRNSVSSSPSSS SSYQSSPRPTSDSEWAGFGLF
Subjt:  NRKPEPDCASELETLPRWSVSSKKSISPFRNSVSSSPSSSLSSYQSSPRPTSDSEWAGFGLF

XP_038899347.1 uncharacterized protein LOC120086669 [Benincasa hispida]2.0e-5371.86Show/hide
Query:  MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLHPFPTHS-PQQHKKLKPPPAVTATQFHRSSNSL----RTRSDRWVSSQSKLAEPEQVSVGCFSSPLPNRK
        MDVDEFYRQPAAVPFKWEIKPGVP+NHHRL   PTHS PQ H+KLKPPP+V  + F   SNSL    RTRSDRW     + ++PEQVS GCF SPLPNRK
Subjt:  MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLHPFPTHS-PQQHKKLKPPPAVTATQFHRSSNSL----RTRSDRWVSSQSKLAEPEQVSVGCFSSPLPNRK

Query:  ASKIVNRKPEPDCASELETLPRWSVSSKKSISPFRNSVSSSPSSSLSSYQSSPRPTSDSEWAGFGLF
        ++K ++R PEPD +S LE+L RWSVSS+KSISPFR SVSSSP SS SSY SSPRPTSD+EWAGFGLF
Subjt:  ASKIVNRKPEPDCASELETLPRWSVSSKKSISPFRNSVSSSPSSSLSSYQSSPRPTSDSEWAGFGLF

TrEMBL top hitse value%identityAlignment
A0A1S3BAM4 uncharacterized protein LOC1034876071.3e-5070Show/hide
Query:  MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLHPFPTHSPQQH--KKLKPPPAVTATQFHRSSNSL----RTRSDRWVSSQSKLAEPEQV-SVGCFSSPLPN
        MD DEFYR+PAAVPFKWEIKPGVPRNHHR    PTHSP QH  +KLKPPPAV  + F   SNSL    RTRSDRW     +    EQV S GCF SPLPN
Subjt:  MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLHPFPTHSPQQH--KKLKPPPAVTATQFHRSSNSL----RTRSDRWVSSQSKLAEPEQV-SVGCFSSPLPN

Query:  RKASKIVNRK-PEPDCASELETLPRWSVSSKKSISPFRNSVSSSPSSSLSSYQSSPRPTSDSEWAGFGLF
        RK+ K ++RK PEPD +S+L+TL RWSVSS+KSISPFR SVSSS  SS SSYQSSPRPTSD+EWAGFGLF
Subjt:  RKASKIVNRK-PEPDCASELETLPRWSVSSKKSISPFRNSVSSSPSSSLSSYQSSPRPTSDSEWAGFGLF

A0A6J1BQH3 uncharacterized protein DKFZp434B061-like4.6e-5169.19Show/hide
Query:  MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLHPFPTHSPQQHKKLKPPPAVTATQFHRSS--------NSLRTRSDRWVSSQSKLAEPEQVS--VGCFSSP
        MD DEFYR+PAAVPFKWEIKPGVPR HHRL P P+  PQ   KLKPPP V  + F R S        +S RTRSDRW  ++S LAEP QVS   GCF SP
Subjt:  MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLHPFPTHSPQQHKKLKPPPAVTATQFHRSS--------NSLRTRSDRWVSSQSKLAEPEQVS--VGCFSSP

Query:  LPNRKASKIVNRKPEPDCASELETLPRWSVSSKKSISPFRNSVSSSPSSSLSSYQSSPRPTSDSEWAGFGLF
         PNRK+ K +NRKPEP+  +ELETL RWSVSS+KSISPFR+SVSSSP SS SSYQSSPRPTSD+EWAGFGLF
Subjt:  LPNRKASKIVNRKPEPDCASELETLPRWSVSSKKSISPFRNSVSSSPSSSLSSYQSSPRPTSDSEWAGFGLF

A0A6J1FHC7 uncharacterized protein LOC1114457752.3e-7995.68Show/hide
Query:  MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLHPFPTHSPQQHKKLKPPPAVTATQFHRSSNSLRTRSDRWVSSQSKLAEPEQVSVGCFSSPLPNRKASKIV
        MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLH FPTHSPQQHKKLKPPPAVTATQFHRSSNSLRTRSDRW S+QSKLAEPEQVSVGCFSSPLPNRKASKIV
Subjt:  MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLHPFPTHSPQQHKKLKPPPAVTATQFHRSSNSLRTRSDRWVSSQSKLAEPEQVSVGCFSSPLPNRKASKIV

Query:  NRKPEPDCASELETLPRWSVSSKKSISPFRNSVSSSPSSSLSSYQSSPRPTSDSEWAGFGLF
        NRKPEPD ASELETLPRWSVSSKKSISPFRNSVS   SSSLSSYQSSPRPTSDSEWAGFGLF
Subjt:  NRKPEPDCASELETLPRWSVSSKKSISPFRNSVSSSPSSSLSSYQSSPRPTSDSEWAGFGLF

A0A6J1ISY3 uncharacterized protein LOC1114803251.5e-8196.32Show/hide
Query:  MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLHPFPTHSPQQHKKLKPPPAVTATQFHRSSNSLRTRSDRWVSSQSKLAEPEQVSVGCFSSPLPNRKASKIV
        MDVDEFYRQPAAVPFKWEIKPGVPRNHH LHPFPTHSPQQHKKLKPPPAVTATQFHRSSNSLRTRSDRW SSQSKLAEPEQVSVGCFSSPLPNRKA+KI+
Subjt:  MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLHPFPTHSPQQHKKLKPPPAVTATQFHRSSNSLRTRSDRWVSSQSKLAEPEQVSVGCFSSPLPNRKASKIV

Query:  NRKPEPDCASELETLPRWSVSSKKSISPFRNSVSSSPS-SSLSSYQSSPRPTSDSEWAGFGLF
        NRKPEPDCASELETLPRWS+SSKKSISPFRNSVSSSPS SSLSSYQSSPRPTSDSEWAGFGLF
Subjt:  NRKPEPDCASELETLPRWSVSSKKSISPFRNSVSSSPS-SSLSSYQSSPRPTSDSEWAGFGLF

A0A7J7DRX3 B-like cyclin1.2e-3049.73Show/hide
Query:  DVDEFYRQPAAVPFKWEIKPGVPR---NHHRLHPFPT------------HS-PQQHKKLKPPPAVTA------TQFHRSSNSLRTRSDRWVSSQSKLAEP
        D D   ++P AVPFKWEI+PGVP+   +HH+  P P             HS P   +KLKPPPAV +       +     ++ RTRS+ W   Q     P
Subjt:  DVDEFYRQPAAVPFKWEIKPGVPR---NHHRLHPFPT------------HS-PQQHKKLKPPPAVTA------TQFHRSSNSLRTRSDRWVSSQSKLAEP

Query:  EQVSVGCFSSPLPNRKASKIVNRKP----EPDCASELETLPRWSVSSKKSISPFRNSVSSSPSSSLSSYQSSPRPTSDSEWAGFGLF
        + VS GCF SPL  RK +K   RKP    EPDC SELETL RWSVSS+K+ SPFR+S     +SS S YQSSPRP SD+EWAGFGLF
Subjt:  EQVSVGCFSSPLPNRKASKIVNRKP----EPDCASELETLPRWSVSSKKSISPFRNSVSSSPSSSLSSYQSSPRPTSDSEWAGFGLF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G77400.1 CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 (InterPro:IPR007789)6.0e-1128.63Show/hide
Query:  MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLHPFPTHSPQQHKKLKP-------------PPAVTATQFHRSSNSL-------------------------
        +DVD+ +++P  +PF WEI+PGVP+      P  T   Q  KKL P             PPA++       SNS                          
Subjt:  MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLHPFPTHSPQQHKKLKP-------------PPAVTATQFHRSSNSL-------------------------

Query:  -----------------RTRSDRWVSSQSKLAEPEQ----------VSVGCFSSP---LPNRKAS----KIVNRKPEPDCASELETLPRWSVSSKKSISP
                         R  S+RW   +     PE              GCF SP   L   K+     K  +R       S++ET+  W+VSS++S+SP
Subjt:  -----------------RTRSDRWVSSQSKLAEPEQ----------VSVGCFSSP---LPNRKAS----KIVNRKPEPDCASELETLPRWSVSSKKSISP

Query:  FRNSVSSSPSSSLSSYQSSPRPTSDSEWAGFGLF
               SP SS SS + SPR  +++EW GFGLF
Subjt:  FRNSVSSSPSSSLSSYQSSPRPTSDSEWAGFGLF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGTCGATGAATTTTACCGGCAACCGGCTGCCGTTCCTTTCAAATGGGAGATCAAACCTGGCGTCCCCAGGAACCACCACCGCCTCCACCCTTTCCCCACTCACTC
TCCTCAACAACACAAGAAGCTAAAGCCTCCTCCTGCTGTAACTGCAACCCAATTCCACCGTTCTTCCAACTCCCTCCGAACCCGGTCCGACCGATGGGTTTCCTCCCAGT
CCAAACTTGCCGAACCCGAGCAGGTCTCGGTCGGTTGCTTCTCCTCGCCTTTGCCGAACCGGAAAGCGAGCAAGATTGTTAACAGGAAACCCGAACCGGATTGCGCCTCT
GAGTTGGAAACTTTGCCGCGGTGGTCGGTTTCCAGTAAGAAGTCGATTTCGCCGTTCAGAAACTCGGTTTCGTCGTCGCCGTCGTCGTCGCTTTCGTCGTACCAGTCATC
GCCCCGTCCGACTAGTGATTCTGAGTGGGCCGGATTTGGGCTCTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACGTCGATGAATTTTACCGGCAACCGGCTGCCGTTCCTTTCAAATGGGAGATCAAACCTGGCGTCCCCAGGAACCACCACCGCCTCCACCCTTTCCCCACTCACTC
TCCTCAACAACACAAGAAGCTAAAGCCTCCTCCTGCTGTAACTGCAACCCAATTCCACCGTTCTTCCAACTCCCTCCGAACCCGGTCCGACCGATGGGTTTCCTCCCAGT
CCAAACTTGCCGAACCCGAGCAGGTCTCGGTCGGTTGCTTCTCCTCGCCTTTGCCGAACCGGAAAGCGAGCAAGATTGTTAACAGGAAACCCGAACCGGATTGCGCCTCT
GAGTTGGAAACTTTGCCGCGGTGGTCGGTTTCCAGTAAGAAGTCGATTTCGCCGTTCAGAAACTCGGTTTCGTCGTCGCCGTCGTCGTCGCTTTCGTCGTACCAGTCATC
GCCCCGTCCGACTAGTGATTCTGAGTGGGCCGGATTTGGGCTCTTTTGA
Protein sequenceShow/hide protein sequence
MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLHPFPTHSPQQHKKLKPPPAVTATQFHRSSNSLRTRSDRWVSSQSKLAEPEQVSVGCFSSPLPNRKASKIVNRKPEPDCAS
ELETLPRWSVSSKKSISPFRNSVSSSPSSSLSSYQSSPRPTSDSEWAGFGLF