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Carg00334 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg00334
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionTransmembrane protein
Genome locationCarg_Chr04:6651559..6653080
RNA-Seq ExpressionCarg00334
SyntenyCarg00334
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8649629.1 hypothetical protein Csa_012354 [Cucumis sativus]2.0e-1370.31Show/hide
Query:  MELAFDCVCRIDELNPPWTPLSDRALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREH
        +E +F+  C++  L   W      ALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREH
Subjt:  MELAFDCVCRIDELNPPWTPLSDRALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREH

KAG6608048.1 hypothetical protein SDJN03_01390, partial [Cucurbita argyrosperma subsp. sororia]9.4e-1677.05Show/hide
Query:  CRIDELNPPWTPLSDRALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHMLSVK
        C +      W      ALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHMLSVK
Subjt:  CRIDELNPPWTPLSDRALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHMLSVK

KAG7031677.1 hypothetical protein SDJN02_05718, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-31100Show/hide
Query:  MELAFDCVCRIDELNPPWTPLSDRALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHMLSVK
        MELAFDCVCRIDELNPPWTPLSDRALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHMLSVK
Subjt:  MELAFDCVCRIDELNPPWTPLSDRALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHMLSVK

MBA0597345.1 hypothetical protein [Gossypium raimondii]2.6e-1370.97Show/hide
Query:  LAFDCVCRIDELNPPWTPLSDRALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREH
        L+F     +D     W      ALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREH
Subjt:  LAFDCVCRIDELNPPWTPLSDRALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREH

XP_010091363.1 uncharacterized protein LOC21403073 [Morus notabilis]8.8e-1476.79Show/hide
Query:  CRIDELNPPWTPLSDRALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREH
        C + E    W      ALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREH
Subjt:  CRIDELNPPWTPLSDRALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREH

TrEMBL top hitse value%identityAlignment
A0A7J8Q701 Uncharacterized protein1.2e-1370.97Show/hide
Query:  LAFDCVCRIDELNPPWTPLSDRALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREH
        L+F     +D     W      ALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREH
Subjt:  LAFDCVCRIDELNPPWTPLSDRALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREH

A0A7J8SK39 Uncharacterized protein1.2e-1370.97Show/hide
Query:  LAFDCVCRIDELNPPWTPLSDRALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREH
        L+F     +D     W      ALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREH
Subjt:  LAFDCVCRIDELNPPWTPLSDRALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREH

A0A7J9CFZ8 Uncharacterized protein1.2e-1370.97Show/hide
Query:  LAFDCVCRIDELNPPWTPLSDRALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREH
        L+F     +D     W      ALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREH
Subjt:  LAFDCVCRIDELNPPWTPLSDRALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREH

A0A7J9EX61 Uncharacterized protein1.2e-1370.97Show/hide
Query:  LAFDCVCRIDELNPPWTPLSDRALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREH
        L+F     +D     W      ALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREH
Subjt:  LAFDCVCRIDELNPPWTPLSDRALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREH

W9QN44 Uncharacterized protein4.3e-1476.79Show/hide
Query:  CRIDELNPPWTPLSDRALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREH
        C + E    W      ALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREH
Subjt:  CRIDELNPPWTPLSDRALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G21930.1 unknown protein5.0e-1566.07Show/hide
Query:  CRIDELNPPWTPLSDRALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREH
        C +      W      AL+AIPVGIKRKSL PLVFFGTTGTMLDII+G+S CEREH
Subjt:  CRIDELNPPWTPLSDRALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREH

AT3G42150.1 unknown protein5.0e-1566.07Show/hide
Query:  CRIDELNPPWTPLSDRALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREH
        C +      W      AL+AIPVGIKRKSL PLVFFGTTGTMLDII+G+S CEREH
Subjt:  CRIDELNPPWTPLSDRALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREH

AT3G42150.2 unknown protein5.0e-1566.07Show/hide
Query:  CRIDELNPPWTPLSDRALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREH
        C +      W      AL+AIPVGIKRKSL PLVFFGTTGTMLDII+G+S CEREH
Subjt:  CRIDELNPPWTPLSDRALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREH

AT3G42150.3 unknown protein5.0e-1566.07Show/hide
Query:  CRIDELNPPWTPLSDRALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREH
        C +      W      AL+AIPVGIKRKSL PLVFFGTTGTMLDII+G+S CEREH
Subjt:  CRIDELNPPWTPLSDRALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACTAGCGTTTGACTGTGTTTGCCGCATTGATGAATTGAATCCTCCATGGACACCTCTTTCTGATAGAGCGTTGCTAGCAATTCCAGTGGGAATAAAGAGGAAGTC
TCTGGCACCCCTTGTGTTTTTTGGCACAACTGGTACAATGCTTGATATCATAATGGGAATTAGTGCCTGTGAGAGAGAACACATGCTGAGCGTCAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAACTAGCGTTTGACTGTGTTTGCCGCATTGATGAATTGAATCCTCCATGGACACCTCTTTCTGATAGAGCGTTGCTAGCAATTCCAGTGGGAATAAAGAGGAAGTC
TCTGGCACCCCTTGTGTTTTTTGGCACAACTGGTACAATGCTTGATATCATAATGGGAATTAGTGCCTGTGAGAGAGAACACATGCTGAGCGTCAAATGA
Protein sequenceShow/hide protein sequence
MELAFDCVCRIDELNPPWTPLSDRALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHMLSVK