; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg00345 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg00345
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr04:6713432..6715957
RNA-Seq ExpressionCarg00345
SyntenyCarg00345
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608059.1 putative protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]9.7e-91100Show/hide
Query:  MTQSPDFGGDYTDGTHHGQSFSSTSLYSSSSRRDVYYSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVDDSRFTQVDELQCVPHFSKHSWGL
        MTQSPDFGGDYTDGTHHGQSFSSTSLYSSSSRRDVYYSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVDDSRFTQVDELQCVPHFSKHSWGL
Subjt:  MTQSPDFGGDYTDGTHHGQSFSSTSLYSSSSRRDVYYSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVDDSRFTQVDELQCVPHFSKHSWGL

Query:  FRRRIKLLCRKCGNHIGNANTSHTFSTPLVSDGSDSSLPSEVSRCTKYEVKIRALQPSSSHEFDPSVI
        FRRRIKLLCRKCGNHIGNANTSHTFSTPLVSDGSDSSLPSEVSRCTKYEVKIRALQPSSSHEFDPSVI
Subjt:  FRRRIKLLCRKCGNHIGNANTSHTFSTPLVSDGSDSSLPSEVSRCTKYEVKIRALQPSSSHEFDPSVI
XP_022135315.1 uncharacterized protein At4g08330, chloroplastic [Momordica charantia]2.2e-7486.9Show/hide
Query:  MTQSPDFGGDYTDGTHHGQSFSSTSLYSSSSRRDVYYSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVDDSRFTQVDELQCVPHFSKHSWGL
        M QSP  G DY DGT H  SFS+ SLYSSSSRRDVYYSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVD+SRFTQVDELQCVPHFSKHSWGL
Subjt:  MTQSPDFGGDYTDGTHHGQSFSSTSLYSSSSRRDVYYSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVDDSRFTQVDELQCVPHFSKHSWGL

Query:  FRRRIKLLCRKCGNHIGNANTSHTFSTPLVSDGSDSSLPSEVSRCTKYEVKIRALQPSSSHEFDPSVI
        FRRR KLLCRKCGNHIGNA+TS   S PLVSDGSDSSLP EVSRC KYEVKIRALQPSSSH+F P VI
Subjt:  FRRRIKLLCRKCGNHIGNANTSHTFSTPLVSDGSDSSLPSEVSRCTKYEVKIRALQPSSSHEFDPSVI
XP_022940003.1 uncharacterized protein At4g08330, chloroplastic [Cucurbita moschata]1.0e-8797.62Show/hide
Query:  MTQSPDFGGDYTDGTHHGQSFSSTSLYSSSSRRDVYYSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVDDSRFTQVDELQCVPHFSKHSWGL
        MTQSPDFGGDYTDGTHH QSFSSTSLYSSSSRRDVYYSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVDDSRFTQVDELQCVPHFSKHSWGL
Subjt:  MTQSPDFGGDYTDGTHHGQSFSSTSLYSSSSRRDVYYSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVDDSRFTQVDELQCVPHFSKHSWGL

Query:  FRRRIKLLCRKCGNHIGNANTSHTFSTPLVSDGSDSSLPSEVSRCTKYEVKIRALQPSSSHEFDPSVI
        FRRRIKLLCRKC NHIGNA+TSHTFSTPLVSDGSDSS PSEVSRCTKYEVKIRALQPSSSHEFDPSVI
Subjt:  FRRRIKLLCRKCGNHIGNANTSHTFSTPLVSDGSDSSLPSEVSRCTKYEVKIRALQPSSSHEFDPSVI
XP_022981061.1 uncharacterized protein At4g08330, chloroplastic [Cucurbita maxima]2.4e-8998.81Show/hide
Query:  MTQSPDFGGDYTDGTHHGQSFSSTSLYSSSSRRDVYYSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVDDSRFTQVDELQCVPHFSKHSWGL
        MTQSPDFGGDYTDGTHH QSFSSTSLYSSSSRRDVYYSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVDDSRFTQVDELQCVPHFSKHSWGL
Subjt:  MTQSPDFGGDYTDGTHHGQSFSSTSLYSSSSRRDVYYSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVDDSRFTQVDELQCVPHFSKHSWGL

Query:  FRRRIKLLCRKCGNHIGNANTSHTFSTPLVSDGSDSSLPSEVSRCTKYEVKIRALQPSSSHEFDPSVI
        FRRRIKLLCRKCGNHIGNANTSHTFSTPLVSDGSDSSLPSEV+RCTKYEVKIRALQPSSSHEFDPSVI
Subjt:  FRRRIKLLCRKCGNHIGNANTSHTFSTPLVSDGSDSSLPSEVSRCTKYEVKIRALQPSSSHEFDPSVI
XP_023523702.1 uncharacterized protein At4g08330, chloroplastic [Cucurbita pepo subsp. pepo]7.0e-8998.21Show/hide
Query:  MTQSPDFGGDYTDGTHHGQSFSSTSLYSSSSRRDVYYSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVDDSRFTQVDELQCVPHFSKHSWGL
        MTQSPDFGGDYTDGTHH QSFSSTSLYS+SSRRDVYYSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVDDSRFTQVDELQCVPHFSKHSWGL
Subjt:  MTQSPDFGGDYTDGTHHGQSFSSTSLYSSSSRRDVYYSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVDDSRFTQVDELQCVPHFSKHSWGL

Query:  FRRRIKLLCRKCGNHIGNANTSHTFSTPLVSDGSDSSLPSEVSRCTKYEVKIRALQPSSSHEFDPSVI
        FRRRIKLLCRKCGNHIGNANTSH+FSTPLVSDGSDSSLPSEVSRCTKYEVKIRALQPSSSHEFDPSVI
Subjt:  FRRRIKLLCRKCGNHIGNANTSHTFSTPLVSDGSDSSLPSEVSRCTKYEVKIRALQPSSSHEFDPSVI
TrEMBL top hitse value%identityAlignment
A0A1S3B9P1 uncharacterized protein At4g08330, chloroplastic7.6e-7384.62Show/hide
Query:  MTQSPDFGGDYTDGTHHGQSFSSTSLYSSSSRRDVYYSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVDDSRFTQVDELQCVPHFSKHSWGL
        M QSP FG DY  GTH  QSFSS SL+ SSSRRDVYYSCGACGYELNLSS NRNTSTIGSKYGKSIKRGIISFLN+D+SRFTQVDELQCVPHFSK+SWGL
Subjt:  MTQSPDFGGDYTDGTHHGQSFSSTSLYSSSSRRDVYYSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVDDSRFTQVDELQCVPHFSKHSWGL

Query:  FRRRIKLLCRKCGNHIGNANTSHTFSTPLVSDGSD-SSLPSEVSRCTKYEVKIRALQPSSSHEFDPSVI
        FRRRIKLLCRKCGN+IGNA+++HT S+PLVSDGSD SSLP+EVSRC KYEVKIRALQPSSS+EF+PS+I
Subjt:  FRRRIKLLCRKCGNHIGNANTSHTFSTPLVSDGSD-SSLPSEVSRCTKYEVKIRALQPSSSHEFDPSVI
A0A5D3D741 Uncharacterized protein7.6e-7384.62Show/hide
Query:  MTQSPDFGGDYTDGTHHGQSFSSTSLYSSSSRRDVYYSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVDDSRFTQVDELQCVPHFSKHSWGL
        M QSP FG DY  GTH  QSFSS SL+ SSSRRDVYYSCGACGYELNLSS NRNTSTIGSKYGKSIKRGIISFLN+D+SRFTQVDELQCVPHFSK+SWGL
Subjt:  MTQSPDFGGDYTDGTHHGQSFSSTSLYSSSSRRDVYYSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVDDSRFTQVDELQCVPHFSKHSWGL

Query:  FRRRIKLLCRKCGNHIGNANTSHTFSTPLVSDGSD-SSLPSEVSRCTKYEVKIRALQPSSSHEFDPSVI
        FRRRIKLLCRKCGN+IGNA+++HT S+PLVSDGSD SSLP+EVSRC KYEVKIRALQPSSS+EF+PS+I
Subjt:  FRRRIKLLCRKCGNHIGNANTSHTFSTPLVSDGSD-SSLPSEVSRCTKYEVKIRALQPSSSHEFDPSVI
A0A6J1C0S6 uncharacterized protein At4g08330, chloroplastic1.1e-7486.9Show/hide
Query:  MTQSPDFGGDYTDGTHHGQSFSSTSLYSSSSRRDVYYSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVDDSRFTQVDELQCVPHFSKHSWGL
        M QSP  G DY DGT H  SFS+ SLYSSSSRRDVYYSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVD+SRFTQVDELQCVPHFSKHSWGL
Subjt:  MTQSPDFGGDYTDGTHHGQSFSSTSLYSSSSRRDVYYSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVDDSRFTQVDELQCVPHFSKHSWGL

Query:  FRRRIKLLCRKCGNHIGNANTSHTFSTPLVSDGSDSSLPSEVSRCTKYEVKIRALQPSSSHEFDPSVI
        FRRR KLLCRKCGNHIGNA+TS   S PLVSDGSDSSLP EVSRC KYEVKIRALQPSSSH+F P VI
Subjt:  FRRRIKLLCRKCGNHIGNANTSHTFSTPLVSDGSDSSLPSEVSRCTKYEVKIRALQPSSSHEFDPSVI
A0A6J1FN39 uncharacterized protein At4g08330, chloroplastic4.9e-8897.62Show/hide
Query:  MTQSPDFGGDYTDGTHHGQSFSSTSLYSSSSRRDVYYSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVDDSRFTQVDELQCVPHFSKHSWGL
        MTQSPDFGGDYTDGTHH QSFSSTSLYSSSSRRDVYYSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVDDSRFTQVDELQCVPHFSKHSWGL
Subjt:  MTQSPDFGGDYTDGTHHGQSFSSTSLYSSSSRRDVYYSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVDDSRFTQVDELQCVPHFSKHSWGL

Query:  FRRRIKLLCRKCGNHIGNANTSHTFSTPLVSDGSDSSLPSEVSRCTKYEVKIRALQPSSSHEFDPSVI
        FRRRIKLLCRKC NHIGNA+TSHTFSTPLVSDGSDSS PSEVSRCTKYEVKIRALQPSSSHEFDPSVI
Subjt:  FRRRIKLLCRKCGNHIGNANTSHTFSTPLVSDGSDSSLPSEVSRCTKYEVKIRALQPSSSHEFDPSVI
A0A6J1IVF4 uncharacterized protein At4g08330, chloroplastic1.2e-8998.81Show/hide
Query:  MTQSPDFGGDYTDGTHHGQSFSSTSLYSSSSRRDVYYSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVDDSRFTQVDELQCVPHFSKHSWGL
        MTQSPDFGGDYTDGTHH QSFSSTSLYSSSSRRDVYYSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVDDSRFTQVDELQCVPHFSKHSWGL
Subjt:  MTQSPDFGGDYTDGTHHGQSFSSTSLYSSSSRRDVYYSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVDDSRFTQVDELQCVPHFSKHSWGL

Query:  FRRRIKLLCRKCGNHIGNANTSHTFSTPLVSDGSDSSLPSEVSRCTKYEVKIRALQPSSSHEFDPSVI
        FRRRIKLLCRKCGNHIGNANTSHTFSTPLVSDGSDSSLPSEV+RCTKYEVKIRALQPSSSHEFDPSVI
Subjt:  FRRRIKLLCRKCGNHIGNANTSHTFSTPLVSDGSDSSLPSEVSRCTKYEVKIRALQPSSSHEFDPSVI
SwissProt top hitse value%identityAlignment
Q9STN5 Uncharacterized protein At4g08330, chloroplastic1.9e-4460.53Show/hide
Query:  GDYTDGTHHGQSFSSTSLYSSSSRRDVYYSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVDDSRFTQVDELQCVPHFSKHSWGLFRRRIKLL
        G +     +  SFSS+S  SSSS R V YSCG+CGYELNLSS+NR TSTIGSKYGKS+K GIISF N+D+ RF+QVDE QC+PHFS++SWGLFR R KLL
Subjt:  GDYTDGTHHGQSFSSTSLYSSSSRRDVYYSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVDDSRFTQVDELQCVPHFSKHSWGLFRRRIKLL

Query:  CRKCGNHIGNANTSHTFSTPLVSDGSDSSLPSEVSRCTKYEVKIRALQPSSS
        CRKC N+IGNA+        LV+  SD + P  +   TKY+++IR+LQPSS+
Subjt:  CRKCGNHIGNANTSHTFSTPLVSDGSDSSLPSEVSRCTKYEVKIRALQPSSS
Arabidopsis top hitse value%identityAlignment
AT4G08330.1 unknown protein1.3e-4560.53Show/hide
Query:  GDYTDGTHHGQSFSSTSLYSSSSRRDVYYSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVDDSRFTQVDELQCVPHFSKHSWGLFRRRIKLL
        G +     +  SFSS+S  SSSS R V YSCG+CGYELNLSS+NR TSTIGSKYGKS+K GIISF N+D+ RF+QVDE QC+PHFS++SWGLFR R KLL
Subjt:  GDYTDGTHHGQSFSSTSLYSSSSRRDVYYSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVDDSRFTQVDELQCVPHFSKHSWGLFRRRIKLL

Query:  CRKCGNHIGNANTSHTFSTPLVSDGSDSSLPSEVSRCTKYEVKIRALQPSSS
        CRKC N+IGNA+        LV+  SD + P  +   TKY+++IR+LQPSS+
Subjt:  CRKCGNHIGNANTSHTFSTPLVSDGSDSSLPSEVSRCTKYEVKIRALQPSSS
AT4G08330.2 unknown protein.3.0e-3754.05Show/hide
Query:  DGTHHGQSFSSTSLYSSSSRRDVYYSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVDDSRFTQVDELQCVPHFSKHSWGLFRRRIKLLCRKC
        DG   G  F S S  SSSS   + +        +N SS+NR TSTIGSKYGKS+K GIISF N+D+ RF+QVDE QC+PHFS++SWGLFR R KLLCRKC
Subjt:  DGTHHGQSFSSTSLYSSSSRRDVYYSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVDDSRFTQVDELQCVPHFSKHSWGLFRRRIKLLCRKC

Query:  GNHIGNANTSHTFSTPLVSDGSDSSLPSEVSRCTKYEVKIRALQPSSS
         N+IGNA+        LV+  SD + P  +   TKY+++IR+LQPSS+
Subjt:  GNHIGNANTSHTFSTPLVSDGSDSSLPSEVSRCTKYEVKIRALQPSSS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGCAGTCGCCGGATTTCGGAGGCGATTACACTGACGGAACTCACCACGGACAGTCCTTTTCGTCGACCTCTCTCTACTCTTCTTCGTCTCGCCGAGATGTTTATTA
CAGCTGTGGTGCTTGTGGATATGAACTGAACTTGAGCTCTTCTAACCGCAATACATCGACCATTGGCTCTAAATATGGTAAGTCGATAAAGCGAGGGATCATATCATTTC
TAAACGTCGACGATAGCAGATTTACTCAGGTTGATGAACTTCAGTGTGTGCCTCATTTCTCGAAGCACTCTTGGGGTCTGTTTCGTCGAAGAATCAAACTACTGTGTCGA
AAATGTGGAAACCATATTGGAAATGCTAACACAAGCCACACTTTCTCCACCCCACTTGTTTCAGATGGATCAGATTCATCTTTGCCCAGTGAAGTCTCTAGGTGTACGAA
ATATGAAGTTAAAATCCGTGCCTTACAACCCTCATCTTCACACGAATTTGACCCCTCAGTTATTTAA
mRNA sequenceShow/hide mRNA sequence
AGCGATTGTTCTTCCAATTCACCACACTTCGTCTCTTAGAAACTGCGATTTTTCTCTTAGGTCACATCTTCTGTTATTGTTTCGAGTTCGCTAAGATTAACTCCGAACTT
GTTCATTATTGTTGTTTGTAACCGCGATTCGTCGTTTACGACCTCGAAATCTCCGTCGACCGTTGCAGCCAGCGTCGGAGTCAGTGTCGTATTCTGAACCGGAGAAATGA
CGCAGTCGCCGGATTTCGGAGGCGATTACACTGACGGAACTCACCACGGACAGTCCTTTTCGTCGACCTCTCTCTACTCTTCTTCGTCTCGCCGAGATGTTTATTACAGC
TGTGGTGCTTGTGGATATGAACTGAACTTGAGCTCTTCTAACCGCAATACATCGACCATTGGCTCTAAATATGGTAAGTCGATAAAGCGAGGGATCATATCATTTCTAAA
CGTCGACGATAGCAGATTTACTCAGGTTGATGAACTTCAGTGTGTGCCTCATTTCTCGAAGCACTCTTGGGGTCTGTTTCGTCGAAGAATCAAACTACTGTGTCGAAAAT
GTGGAAACCATATTGGAAATGCTAACACAAGCCACACTTTCTCCACCCCACTTGTTTCAGATGGATCAGATTCATCTTTGCCCAGTGAAGTCTCTAGGTGTACGAAATAT
GAAGTTAAAATCCGTGCCTTACAACCCTCATCTTCACACGAATTTGACCCCTCAGTTATTTAAACAACGGGACAAGGCTTTACTGAATGGGTCCTCCTCCGAGTGTGCTA
TTTACTTGTGAATAAGAATTGGGTCTGAAATGGAAGCAAGTGTAATTGAAAGGATTCACAGCTATTGTTCCTGCCAACTAAAGGATGCTTTATACGTGGGAGTTGTTTCG
AAGCTACTGATGTTTTTGCCTTATTTTTCGTTTTGCAACGAAGCATTGTTTAATGTGGCTTTATCGAAGTAACTTATAGGTTAAAGTTATAAATTTAGTCTTCAAATTCT
TAGGTTTGTATTTATTTGGTTTCTAAGTTTTAAAACGTTTGAACTTTGAAATTTCATATTCAGAACTTATAAAAATGACTCCATTAGATAT
Protein sequenceShow/hide protein sequence
MTQSPDFGGDYTDGTHHGQSFSSTSLYSSSSRRDVYYSCGACGYELNLSSSNRNTSTIGSKYGKSIKRGIISFLNVDDSRFTQVDELQCVPHFSKHSWGLFRRRIKLLCR
KCGNHIGNANTSHTFSTPLVSDGSDSSLPSEVSRCTKYEVKIRALQPSSSHEFDPSVI