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Carg00356 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg00356
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr04:6774425..6775421
RNA-Seq ExpressionCarg00356
SyntenyCarg00356
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608068.1 Beta-1,3-galactosyltransferase 7, partial [Cucurbita argyrosperma subsp. sororia]1.9e-9292.63Show/hide
Query:  KTDIIFSCEEECRSSHVTLSINFFYSPFPIPSLFSSSLAWRTNNHQLNSHSISDDNSIPILPKFFPDSFIYLLSSPTLQLLPSSQTHCFDTGFHSPLIPT
        KTDIIFSCEEECRSSHVTLSINFFYSPFPIPSLFSSSLAWRTNNHQLNSHSISDDNSIPILPKFFPDSFIYLLSSPTLQLLPSSQTHCFDTGFHSPLIPT
Subjt:  KTDIIFSCEEECRSSHVTLSINFFYSPFPIPSLFSSSLAWRTNNHQLNSHSISDDNSIPILPKFFPDSFIYLLSSPTLQLLPSSQTHCFDTGFHSPLIPT

Query:  PLLSPSFQFQSLGSR-------------LQSFAINAFGETSEGFKRYCHCQLEFSNNVTVTLGYARFLVITISNAESLLEENKSARQGGK
        PLLSPSFQFQSLGSR             LQSFAINAFGETSEGFKRYCHCQLEFSNNVTVTLGY RFLVITISNAESLLEENKSARQGGK
Subjt:  PLLSPSFQFQSLGSR-------------LQSFAINAFGETSEGFKRYCHCQLEFSNNVTVTLGYARFLVITISNAESLLEENKSARQGGK

KAG7024643.1 hypothetical protein SDJN02_13461, partial [Cucurbita argyrosperma subsp. argyrosperma]2.5e-0737.25Show/hide
Query:  NFFYSPFPIPSLFSSSLAWRTNNHQLNSHSISDDNSIPILPKFFPDSFIYLLSSPTLQLLPSSQTHCFDTGFHSPLIPTPLLSPSFQFQSLGSRLQSFAI
        N F    PIP  FSSSLAWRT N +LN H +S  NS+PIL  F  D  I++  +  L          F        +P+ + S    F +L S L   AI
Subjt:  NFFYSPFPIPSLFSSSLAWRTNNHQLNSHSISDDNSIPILPKFFPDSFIYLLSSPTLQLLPSSQTHCFDTGFHSPLIPTPLLSPSFQFQSLGSRLQSFAI

Query:  NAF-GETSEGFKRYCHCQLEFSNNVTVTLGYARFLVITISNAESLL-EENKSA
          F G+ S+     CH +LE + + TV  GY RF+V+ I  A+ ++  E KSA
Subjt:  NAF-GETSEGFKRYCHCQLEFSNNVTVTLGYARFLVITISNAESLL-EENKSA

KAG7031699.1 hypothetical protein SDJN02_05740, partial [Cucurbita argyrosperma subsp. argyrosperma]1.5e-97100Show/hide
Query:  KTDIIFSCEEECRSSHVTLSINFFYSPFPIPSLFSSSLAWRTNNHQLNSHSISDDNSIPILPKFFPDSFIYLLSSPTLQLLPSSQTHCFDTGFHSPLIPT
        KTDIIFSCEEECRSSHVTLSINFFYSPFPIPSLFSSSLAWRTNNHQLNSHSISDDNSIPILPKFFPDSFIYLLSSPTLQLLPSSQTHCFDTGFHSPLIPT
Subjt:  KTDIIFSCEEECRSSHVTLSINFFYSPFPIPSLFSSSLAWRTNNHQLNSHSISDDNSIPILPKFFPDSFIYLLSSPTLQLLPSSQTHCFDTGFHSPLIPT

Query:  PLLSPSFQFQSLGSRLQSFAINAFGETSEGFKRYCHCQLEFSNNVTVTLGYARFLVITISNAESLLEENKSARQGGKLASL
        PLLSPSFQFQSLGSRLQSFAINAFGETSEGFKRYCHCQLEFSNNVTVTLGYARFLVITISNAESLLEENKSARQGGKLASL
Subjt:  PLLSPSFQFQSLGSRLQSFAINAFGETSEGFKRYCHCQLEFSNNVTVTLGYARFLVITISNAESLLEENKSARQGGKLASL

TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAAACTGATATTATTTTCTCGTGTGAAGAAGAGTGCCGTTCTTCGCATGTTACATTGAGTATCAATTTCTTCTATTCGCCTTTTCCAATTCCTTCTTTGTTCTCGTCGTC
TCTCGCATGGCGGACCAATAATCATCAACTCAATTCCCATTCCATATCCGACGATAATTCAATCCCCATTTTGCCTAAGTTCTTCCCCGATTCCTTCATTTATCTGCTCT
CTTCTCCTACTCTCCAACTTTTGCCTTCTTCCCAGACGCATTGCTTCGATACAGGGTTCCATTCACCACTTATACCCACTCCTTTGCTTTCCCCTTCCTTTCAATTTCAA
TCACTGGGCTCAAGGCTGCAATCCTTTGCAATTAATGCTTTTGGTGAAACTTCAGAGGGGTTCAAGCGATATTGTCATTGTCAATTAGAATTCAGTAACAATGTCACTGT
CACGCTTGGATATGCTCGGTTTCTAGTGATTACGATTTCTAATGCAGAATCGTTGTTGGAGGAGAATAAATCTGCAAGACAGGGTGGGAAGTTAGCTAGTCTGTAG
mRNA sequenceShow/hide mRNA sequence
AAAACTGATATTATTTTCTCGTGTGAAGAAGAGTGCCGTTCTTCGCATGTTACATTGAGTATCAATTTCTTCTATTCGCCTTTTCCAATTCCTTCTTTGTTCTCGTCGTC
TCTCGCATGGCGGACCAATAATCATCAACTCAATTCCCATTCCATATCCGACGATAATTCAATCCCCATTTTGCCTAAGTTCTTCCCCGATTCCTTCATTTATCTGCTCT
CTTCTCCTACTCTCCAACTTTTGCCTTCTTCCCAGACGCATTGCTTCGATACAGGGTTCCATTCACCACTTATACCCACTCCTTTGCTTTCCCCTTCCTTTCAATTTCAA
TCACTGGGCTCAAGGCTGCAATCCTTTGCAATTAATGCTTTTGGTGAAACTTCAGAGGGGTTCAAGCGATATTGTCATTGTCAATTAGAATTCAGTAACAATGTCACTGT
CACGCTTGGATATGCTCGGTTTCTAGTGATTACGATTTCTAATGCAGAATCGTTGTTGGAGGAGAATAAATCTGCAAGACAGGGTGGGAAGTTAGCTAGTCTGTAG
Protein sequenceShow/hide protein sequence
KTDIIFSCEEECRSSHVTLSINFFYSPFPIPSLFSSSLAWRTNNHQLNSHSISDDNSIPILPKFFPDSFIYLLSSPTLQLLPSSQTHCFDTGFHSPLIPTPLLSPSFQFQ
SLGSRLQSFAINAFGETSEGFKRYCHCQLEFSNNVTVTLGYARFLVITISNAESLLEENKSARQGGKLASL