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Carg00371 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg00371
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr04:6870371..6870803
RNA-Seq ExpressionCarg00371
SyntenyCarg00371
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608080.1 hypothetical protein SDJN03_01422, partial [Cucurbita argyrosperma subsp. sororia]9.2e-24100Show/hide
Query:  MDPRSKLEPSPGGDPLSLDLELNLNSQSMRNGGESKKRSDGAWKEGHGCPQQEMIAR
        MDPRSKLEPSPGGDPLSLDLELNLNSQSMRNGGESKKRSDGAWKEGHGCPQQEMIAR
Subjt:  MDPRSKLEPSPGGDPLSLDLELNLNSQSMRNGGESKKRSDGAWKEGHGCPQQEMIAR

KAG7031714.1 hypothetical protein SDJN02_05755, partial [Cucurbita argyrosperma subsp. argyrosperma]2.3e-30100Show/hide
Query:  MDPRSKLEPSPGGDPLSLDLELNLNSQSMRNGGESKKRSDGAWKEGHGCPQQEMIARDQTSLYVLEYM
        MDPRSKLEPSPGGDPLSLDLELNLNSQSMRNGGESKKRSDGAWKEGHGCPQQEMIARDQTSLYVLEYM
Subjt:  MDPRSKLEPSPGGDPLSLDLELNLNSQSMRNGGESKKRSDGAWKEGHGCPQQEMIARDQTSLYVLEYM

XP_022940283.1 uncharacterized protein LOC111445951 [Cucurbita moschata]4.6e-2396.49Show/hide
Query:  MDPRSKLEPSPGGDPLSLDLELNLNSQSMRNGGESKKRSDGAWKEGHGCPQQEMIAR
        MDPRSKLEPSPGGDPLSLDLELNLNSQSMRNGGESKK+SDGAWK+GHGCPQQEMIAR
Subjt:  MDPRSKLEPSPGGDPLSLDLELNLNSQSMRNGGESKKRSDGAWKEGHGCPQQEMIAR

XP_022981059.1 uncharacterized protein LOC111480319 [Cucurbita maxima]2.1e-2084.38Show/hide
Query:  MDPRSKLEPSPGGDPLSLDLELNLNSQSMRNGGESKKRSDG-------AWKEGHGCPQQEMIAR
        MDPRSKLEP PGGDPLSLDLELNLNSQSMRNGGESKK+SDG       AWK+GHGCPQQEMIAR
Subjt:  MDPRSKLEPSPGGDPLSLDLELNLNSQSMRNGGESKKRSDG-------AWKEGHGCPQQEMIAR

XP_023524779.1 uncharacterized protein LOC111788613 [Cucurbita pepo subsp. pepo]3.9e-2294.74Show/hide
Query:  MDPRSKLEPSPGGDPLSLDLELNLNSQSMRNGGESKKRSDGAWKEGHGCPQQEMIAR
        MDPRSKLE SPGGDPLSLDLELNLNSQSMRNGGESKK+SDGAWK+GHGCPQQEMIAR
Subjt:  MDPRSKLEPSPGGDPLSLDLELNLNSQSMRNGGESKKRSDGAWKEGHGCPQQEMIAR

TrEMBL top hitse value%identityAlignment
A0A6J1F8N8 uncharacterized protein LOC1114431361.7e-0753.95Show/hide
Query:  MDPRSKLE--PSPGGDPLSLDLELNLNSQSMRNGGESKKRSDG--------AWKEGHGCP---------QQEMIAR
        MDPR K E   S GG+PLSLDLELNLN QS+R+GG++KK+SDG          K+G+GCP         QQEM AR
Subjt:  MDPRSKLE--PSPGGDPLSLDLELNLNSQSMRNGGESKKRSDG--------AWKEGHGCP---------QQEMIAR

A0A6J1FNU7 uncharacterized protein LOC1114459512.2e-2396.49Show/hide
Query:  MDPRSKLEPSPGGDPLSLDLELNLNSQSMRNGGESKKRSDGAWKEGHGCPQQEMIAR
        MDPRSKLEPSPGGDPLSLDLELNLNSQSMRNGGESKK+SDGAWK+GHGCPQQEMIAR
Subjt:  MDPRSKLEPSPGGDPLSLDLELNLNSQSMRNGGESKKRSDGAWKEGHGCPQQEMIAR

A0A6J1IME5 uncharacterized protein LOC1114765643.4e-0855.26Show/hide
Query:  MDPRSKLEPSP--GGDPLSLDLELNLNSQSMRNGGESKKRSDG--------AWKEGHGCP---------QQEMIAR
        MDPR K E S   GG+PLSLDLELNLN QS+RNGG++KK+SDG          K+G+GCP         QQEM AR
Subjt:  MDPRSKLEPSP--GGDPLSLDLELNLNSQSMRNGGESKKRSDG--------AWKEGHGCP---------QQEMIAR

A0A6J1J0Y6 uncharacterized protein LOC1114803191.0e-2084.38Show/hide
Query:  MDPRSKLEPSPGGDPLSLDLELNLNSQSMRNGGESKKRSDG-------AWKEGHGCPQQEMIAR
        MDPRSKLEP PGGDPLSLDLELNLNSQSMRNGGESKK+SDG       AWK+GHGCPQQEMIAR
Subjt:  MDPRSKLEPSPGGDPLSLDLELNLNSQSMRNGGESKKRSDG-------AWKEGHGCPQQEMIAR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCCAAGGAGCAAATTGGAGCCTAGCCCAGGTGGTGATCCCTTGAGCTTGGACCTTGAGCTGAATCTCAACAGCCAATCTATGAGAAATGGAGGTGAATCAAAGAA
GAGGAGCGATGGGGCATGGAAAGAAGGACATGGGTGTCCGCAGCAAGAGATGATAGCGAGGGACCAGACTTCACTTTATGTTTTGGAATATATGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATCCAAGGAGCAAATTGGAGCCTAGCCCAGGTGGTGATCCCTTGAGCTTGGACCTTGAGCTGAATCTCAACAGCCAATCTATGAGAAATGGAGGTGAATCAAAGAA
GAGGAGCGATGGGGCATGGAAAGAAGGACATGGGTGTCCGCAGCAAGAGATGATAGCGAGGGACCAGACTTCACTTTATGTTTTGGAATATATGTAA
Protein sequenceShow/hide protein sequence
MDPRSKLEPSPGGDPLSLDLELNLNSQSMRNGGESKKRSDGAWKEGHGCPQQEMIARDQTSLYVLEYM