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Carg00372 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg00372
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionRetrotransposon-derived protein PEG10, putative
Genome locationCarg_Chr04:6872529..6872962
RNA-Seq ExpressionCarg00372
SyntenyCarg00372
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038606.1 putative Retrotransposon-derived protein PEG10 [Cucumis melo var. makuwa]8.6e-2976.19Show/hide
Query:  MEGVEAESRDEAMR-SKTAFRCAKAAFLISSFKSLQNRNLRASVDEEAKEKERLRKVVGDLKIELAMERRRNRRIKLCGLMEFVLQLLLVISLSSFFLFI
        ME VEAES+DEAMR SKTA RCAKAAFL+SS KS QNR LRA+  E+AKE++ LRK VGDLKI+LA ER RN+RIKLCGLMEFVLQLLLVISLSS  LF+
Subjt:  MEGVEAESRDEAMR-SKTAFRCAKAAFLISSFKSLQNRNLRASVDEEAKEKERLRKVVGDLKIELAMERRRNRRIKLCGLMEFVLQLLLVISLSSFFLFI

Query:  AFKSI
        AFK +
Subjt:  AFKSI

KAG6608080.1 hypothetical protein SDJN03_01422, partial [Cucurbita argyrosperma subsp. sororia]1.2e-3598.88Show/hide
Query:  MEGVEAESRDEAMRSKTAFRCAKAAFLISSFKSLQNRNLRASVDEEAKEKERLRKVVGDLKIELAMERRRNRRIKLCGLMEFVLQLLLV
        MEGVEAESRDEAMRSKTAFRCAKAAFLISSFKSLQNRNLRASVDEEAKEKERLRKVVGDLKIELAMERRRNRRIKLCGLMEFVLQLLL+
Subjt:  MEGVEAESRDEAMRSKTAFRCAKAAFLISSFKSLQNRNLRASVDEEAKEKERLRKVVGDLKIELAMERRRNRRIKLCGLMEFVLQLLLV

KAG7031715.1 hypothetical protein SDJN02_05756, partial [Cucurbita argyrosperma subsp. argyrosperma]6.1e-43100Show/hide
Query:  MEGVEAESRDEAMRSKTAFRCAKAAFLISSFKSLQNRNLRASVDEEAKEKERLRKVVGDLKIELAMERRRNRRIKLCGLMEFVLQLLLVISLSSFFLFIA
        MEGVEAESRDEAMRSKTAFRCAKAAFLISSFKSLQNRNLRASVDEEAKEKERLRKVVGDLKIELAMERRRNRRIKLCGLMEFVLQLLLVISLSSFFLFIA
Subjt:  MEGVEAESRDEAMRSKTAFRCAKAAFLISSFKSLQNRNLRASVDEEAKEKERLRKVVGDLKIELAMERRRNRRIKLCGLMEFVLQLLLVISLSSFFLFIA

Query:  FKSI
        FKSI
Subjt:  FKSI

XP_022138206.1 uncharacterized protein LOC111009432 [Momordica charantia]7.0e-3178.64Show/hide
Query:  MEGVEAESRDEAMRSKTAFRCAKAAFLISSFKSLQNRNLRASVDEEAKEKERLRKVVGDLKIELAMERRRNRRIKLCGLMEFVLQLLLVISLSSFFLFIA
        ME VEAESRDEAMRS+TAFRCAKAAF++SS KS QN  LRA+V E  KEKE+LRK +GDLK+ELA ER RN+RIKLCGLMEFVLQ+LLVI+LSSFF FIA
Subjt:  MEGVEAESRDEAMRSKTAFRCAKAAFLISSFKSLQNRNLRASVDEEAKEKERLRKVVGDLKIELAMERRRNRRIKLCGLMEFVLQLLLVISLSSFFLFIA

Query:  FKS
        FKS
Subjt:  FKS

XP_022940284.1 uncharacterized protein LOC111445952 [Cucurbita moschata]8.8e-4297.12Show/hide
Query:  MEGVEAESRDEAMRSKTAFRCAKAAFLISSFKSLQNRNLRASVDEEAKEKERLRKVVGDLKIELAMERRRNRRIKLCGLMEFVLQLLLVISLSSFFLFIA
        MEGVEAESRDEAMRSKTAFRCAKAAFLISSFKS QNRNLRASVDE+AKEKERLRKVVGDLKIELAMERRRN+RIKLCGLMEFVLQLLLVISLSSFFLFIA
Subjt:  MEGVEAESRDEAMRSKTAFRCAKAAFLISSFKSLQNRNLRASVDEEAKEKERLRKVVGDLKIELAMERRRNRRIKLCGLMEFVLQLLLVISLSSFFLFIA

Query:  FKSI
        FKSI
Subjt:  FKSI

TrEMBL top hitse value%identityAlignment
A0A0A0LJY1 Uncharacterized protein1.7e-2776.47Show/hide
Query:  MEGVEAESRDEAMR-SKTAFRCAKAAFLISSFKSLQNRNLRASVDEEAKEKERLRKVVGDLKIELAMERRRNRRIKLCGLMEFVLQLLLVISLSSFFLFI
        ME VEAE+++EAMR SKTA RCAKAAFL+SS KS QNR LRA+V E+AKEK+ L K VGDLKI+LA ER RN+RIKLCGLMEFVLQLLLV+SLSS FLF 
Subjt:  MEGVEAESRDEAMR-SKTAFRCAKAAFLISSFKSLQNRNLRASVDEEAKEKERLRKVVGDLKIELAMERRRNRRIKLCGLMEFVLQLLLVISLSSFFLFI

Query:  AF
        AF
Subjt:  AF

A0A5D3E7E0 Putative Retrotransposon-derived protein PEG104.1e-2976.19Show/hide
Query:  MEGVEAESRDEAMR-SKTAFRCAKAAFLISSFKSLQNRNLRASVDEEAKEKERLRKVVGDLKIELAMERRRNRRIKLCGLMEFVLQLLLVISLSSFFLFI
        ME VEAES+DEAMR SKTA RCAKAAFL+SS KS QNR LRA+  E+AKE++ LRK VGDLKI+LA ER RN+RIKLCGLMEFVLQLLLVISLSS  LF+
Subjt:  MEGVEAESRDEAMR-SKTAFRCAKAAFLISSFKSLQNRNLRASVDEEAKEKERLRKVVGDLKIELAMERRRNRRIKLCGLMEFVLQLLLVISLSSFFLFI

Query:  AFKSI
        AFK +
Subjt:  AFKSI

A0A6J1C920 uncharacterized protein LOC1110094323.4e-3178.64Show/hide
Query:  MEGVEAESRDEAMRSKTAFRCAKAAFLISSFKSLQNRNLRASVDEEAKEKERLRKVVGDLKIELAMERRRNRRIKLCGLMEFVLQLLLVISLSSFFLFIA
        ME VEAESRDEAMRS+TAFRCAKAAF++SS KS QN  LRA+V E  KEKE+LRK +GDLK+ELA ER RN+RIKLCGLMEFVLQ+LLVI+LSSFF FIA
Subjt:  MEGVEAESRDEAMRSKTAFRCAKAAFLISSFKSLQNRNLRASVDEEAKEKERLRKVVGDLKIELAMERRRNRRIKLCGLMEFVLQLLLVISLSSFFLFIA

Query:  FKS
        FKS
Subjt:  FKS

A0A6J1FJM5 uncharacterized protein LOC1114459524.3e-4297.12Show/hide
Query:  MEGVEAESRDEAMRSKTAFRCAKAAFLISSFKSLQNRNLRASVDEEAKEKERLRKVVGDLKIELAMERRRNRRIKLCGLMEFVLQLLLVISLSSFFLFIA
        MEGVEAESRDEAMRSKTAFRCAKAAFLISSFKS QNRNLRASVDE+AKEKERLRKVVGDLKIELAMERRRN+RIKLCGLMEFVLQLLLVISLSSFFLFIA
Subjt:  MEGVEAESRDEAMRSKTAFRCAKAAFLISSFKSLQNRNLRASVDEEAKEKERLRKVVGDLKIELAMERRRNRRIKLCGLMEFVLQLLLVISLSSFFLFIA

Query:  FKSI
        FKSI
Subjt:  FKSI

A0A6J5WH66 Uncharacterized protein1.8e-1651.4Show/hide
Query:  MEGVEAESRD---EAMRSKTAFRCAKAAFLISSFKSLQNRNLRASVD-EEAKEKERLRKVVGDLKIELAMERRRNRRIKLCGLMEFVLQLLLVISLSSFF
        MEG E +++    EA+RS  A RCAKAA L+SS KS  NR+L  ++D ++  EKE LR+ +GDLK+E+  ER +N+RIKLCGL+E +LQL+L+++LS+FF
Subjt:  MEGVEAESRD---EAMRSKTAFRCAKAAFLISSFKSLQNRNLRASVD-EEAKEKERLRKVVGDLKIELAMERRRNRRIKLCGLMEFVLQLLLVISLSSFF

Query:  LFIAFKS
          +AF++
Subjt:  LFIAFKS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G78172.1 unknown protein4.0e-0843.33Show/hide
Query:  SRDEAMRSKTAFRCAKAAFLISSFKSLQNRNLRASVDEEAKEKERLRKVVGDLKIELAMERRRNRRIKLCGLMEFVLQLLLVISLSSFFL
        S+DE  R  TA RCA+A  L+ S  S  +R + ++   E +EK   R+ + DL+ +L M + +  RIKLCGLME +L + LV+ LS+FFL
Subjt:  SRDEAMRSKTAFRCAKAAFLISSFKSLQNRNLRASVDEEAKEKERLRKVVGDLKIELAMERRRNRRIKLCGLMEFVLQLLLVISLSSFFL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGGAGTCGAGGCGGAATCCAGAGATGAAGCAATGAGATCCAAAACTGCATTTCGATGTGCGAAAGCAGCGTTTCTGATTTCTTCGTTCAAATCCTTACAGAATCG
CAACCTCAGAGCATCTGTCGACGAAGAAGCGAAGGAGAAAGAGAGACTGAGGAAAGTTGTTGGAGATTTGAAGATCGAGTTGGCTATGGAGCGTCGGAGGAATAGGAGGA
TCAAGCTCTGCGGTTTGATGGAATTCGTTCTTCAGCTCTTGCTGGTTATTTCTCTTTCGAGCTTCTTCCTTTTTATCGCCTTCAAATCTATCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGGAGTCGAGGCGGAATCCAGAGATGAAGCAATGAGATCCAAAACTGCATTTCGATGTGCGAAAGCAGCGTTTCTGATTTCTTCGTTCAAATCCTTACAGAATCG
CAACCTCAGAGCATCTGTCGACGAAGAAGCGAAGGAGAAAGAGAGACTGAGGAAAGTTGTTGGAGATTTGAAGATCGAGTTGGCTATGGAGCGTCGGAGGAATAGGAGGA
TCAAGCTCTGCGGTTTGATGGAATTCGTTCTTCAGCTCTTGCTGGTTATTTCTCTTTCGAGCTTCTTCCTTTTTATCGCCTTCAAATCTATCTGA
Protein sequenceShow/hide protein sequence
MEGVEAESRDEAMRSKTAFRCAKAAFLISSFKSLQNRNLRASVDEEAKEKERLRKVVGDLKIELAMERRRNRRIKLCGLMEFVLQLLLVISLSSFFLFIAFKSI