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Carg00385 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg00385
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr04:6946059..6947869
RNA-Seq ExpressionCarg00385
SyntenyCarg00385
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608094.1 Homeobox-leucine zipper protein ATHB-8, partial [Cucurbita argyrosperma subsp. sororia]8.9e-1352.34Show/hide
Query:  MVSEEEWEQIVASKEIKAKHVIWTKLVISPSINFLCSVPALIRPIVLIHGQPNVFLEALASTMDY-HLAFRNAFKHNIISASSCSSDFCVDIVTLIAASM
        MVSEEEWEQIVASKEIKAKH I                              + F + L+  +   +  +RNAFKHNIISASSCSSDFCVDIVTLIAASM
Subjt:  MVSEEEWEQIVASKEIKAKHVIWTKLVISPSINFLCSVPALIRPIVLIHGQPNVFLEALASTMDY-HLAFRNAFKHNIISASSCSSDFCVDIVTLIAASM

Query:  SLLWDLK
        +L  DL+
Subjt:  SLLWDLK

KAG7031728.1 hypothetical protein SDJN02_05769, partial [Cucurbita argyrosperma subsp. argyrosperma]2.2e-51100Show/hide
Query:  MVSEEEWEQIVASKEIKAKHVIWTKLVISPSINFLCSVPALIRPIVLIHGQPNVFLEALASTMDYHLAFRNAFKHNIISASSCSSDFCVDIVTLIAASMS
        MVSEEEWEQIVASKEIKAKHVIWTKLVISPSINFLCSVPALIRPIVLIHGQPNVFLEALASTMDYHLAFRNAFKHNIISASSCSSDFCVDIVTLIAASMS
Subjt:  MVSEEEWEQIVASKEIKAKHVIWTKLVISPSINFLCSVPALIRPIVLIHGQPNVFLEALASTMDYHLAFRNAFKHNIISASSCSSDFCVDIVTLIAASMS

Query:  LLWDLKQT
        LLWDLKQT
Subjt:  LLWDLKQT

XP_022940101.1 uncharacterized protein LOC111445823 [Cucurbita moschata]9.5e-2391.04Show/hide
Query:  ALIRPIVLIHGQPNVFLEALASTMDYHLAFRNAFKHNIISASSCSSDFCVDIVTLIAASMSLLWDLK
        +LIRPIVLIHGQPNVFLEALASTMD HLAFRNAFKHNIISASSCSSDFCVDIVTLIAASM+L  DL+
Subjt:  ALIRPIVLIHGQPNVFLEALASTMDYHLAFRNAFKHNIISASSCSSDFCVDIVTLIAASMSLLWDLK

TrEMBL top hitse value%identityAlignment
A0A6J1FHI6 uncharacterized protein LOC1114458234.6e-2391.04Show/hide
Query:  ALIRPIVLIHGQPNVFLEALASTMDYHLAFRNAFKHNIISASSCSSDFCVDIVTLIAASMSLLWDLK
        +LIRPIVLIHGQPNVFLEALASTMD HLAFRNAFKHNIISASSCSSDFCVDIVTLIAASM+L  DL+
Subjt:  ALIRPIVLIHGQPNVFLEALASTMDYHLAFRNAFKHNIISASSCSSDFCVDIVTLIAASMSLLWDLK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGTCGGAGGAGGAATGGGAGCAAATTGTTGCATCAAAAGAAATAAAAGCCAAGCATGTCATTTGGACGAAATTAGTAATAAGCCCAAGCATAAACTTCCTGTGTTC
TGTCCCAGCTCTAATTAGGCCCATTGTCTTAATCCATGGACAGCCCAACGTCTTTCTTGAAGCTCTCGCTTCGACGATGGATTATCACCTTGCATTTCGAAATGCCTTCA
AACACAACATTATTTCGGCTTCATCTTGTTCCAGCGACTTCTGTGTAGACATTGTGACCTTGATTGCCGCCTCCATGAGTCTTCTATGGGATCTAAAACAAACATAA
mRNA sequenceShow/hide mRNA sequence
ATGGTGTCGGAGGAGGAATGGGAGCAAATTGTTGCATCAAAAGAAATAAAAGCCAAGCATGTCATTTGGACGAAATTAGTAATAAGCCCAAGCATAAACTTCCTGTGTTC
TGTCCCAGCTCTAATTAGGCCCATTGTCTTAATCCATGGACAGCCCAACGTCTTTCTTGAAGCTCTCGCTTCGACGATGGATTATCACCTTGCATTTCGAAATGCCTTCA
AACACAACATTATTTCGGCTTCATCTTGTTCCAGCGACTTCTGTGTAGACATTGTGACCTTGATTGCCGCCTCCATGAGTCTTCTATGGGATCTAAAACAAACATAA
Protein sequenceShow/hide protein sequence
MVSEEEWEQIVASKEIKAKHVIWTKLVISPSINFLCSVPALIRPIVLIHGQPNVFLEALASTMDYHLAFRNAFKHNIISASSCSSDFCVDIVTLIAASMSLLWDLKQT