CuGenDBv2

Gene ID	Carg00413
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	protein odr-4 homolog
Genome location	Carg_Chr04:7114109..7118049
RNA-Seq Expression	Carg00413
Synteny	Carg00413
Gene Ontology terms	GO:0008104 - protein localization (biological process) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR029454 - ODR-4-like

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG7031756.1 hypothetical protein SDJN02_05797, partial [Cucurbita argyrosperma subsp. argyrosperma]

3.4e-126

100

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Query:  MIDGNLVVSAPSTLGDLHEIELLLPFLKNTSLEACRQKEVDGIVVFRGSVCSFAYLNSKEPVSEAVTEIKGDIITSLQSRLDIICDEVDADKEAHDVHED
        MIDGNLVVSAPSTLGDLHEIELLLPFLKNTSLEACRQKEVDGIVVFRGSVCSFAYLNSKEPVSEAVTEIKGDIITSLQSRLDIICDEVDADKEAHDVHED
Subjt:  MIDGNLVVSAPSTLGDLHEIELLLPFLKNTSLEACRQKEVDGIVVFRGSVCSFAYLNSKEPVSEAVTEIKGDIITSLQSRLDIICDEVDADKEAHDVHED

Query:  ANEVASEHVSQLFLHSLRKQCNLSFPRRVFVPWLADMYICDYLQPSETTAVLKEHCTELMSMEASMDMTTVLEPEKEALSLSAESFWDVAVPFQCGETSL
        ANEVASEHVSQLFLHSLRKQCNLSFPRRVFVPWLADMYICDYLQPSETTAVLKEHCTELMSMEASMDMTTVLEPEKEALSLSAESFWDVAVPFQCGETSL
Subjt:  ANEVASEHVSQLFLHSLRKQCNLSFPRRVFVPWLADMYICDYLQPSETTAVLKEHCTELMSMEASMDMTTVLEPEKEALSLSAESFWDVAVPFQCGETSL

Query:  EKKNRDDGTITGSNATSSSKSSDFALYRWMAVI
        EKKNRDDGTITGSNATSSSKSSDFALYRWMAVI
Subjt:  EKKNRDDGTITGSNATSSSKSSDFALYRWMAVI

XP_022940459.1 protein odr-4 homolog isoform X1 [Cucurbita moschata]

4.0e-119

100

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Query:  MIDGNLVVSAPSTLGDLHEIELLLPFLKNTSLEACRQKEVDGIVVFRGSVCSFAYLNSKEPVSEAVTEIKGDIITSLQSRLDIICDEVDADKEAHDVHED
        MIDGNLVVSAPSTLGDLHEIELLLPFLKNTSLEACRQKEVDGIVVFRGSVCSFAYLNSKEPVSEAVTEIKGDIITSLQSRLDIICDEVDADKEAHDVHED
Subjt:  MIDGNLVVSAPSTLGDLHEIELLLPFLKNTSLEACRQKEVDGIVVFRGSVCSFAYLNSKEPVSEAVTEIKGDIITSLQSRLDIICDEVDADKEAHDVHED

Query:  ANEVASEHVSQLFLHSLRKQCNLSFPRRVFVPWLADMYICDYLQPSETTAVLKEHCTELMSMEASMDMTTVLEPEKEALSLSAESFWDVAVPFQCGETSL
        ANEVASEHVSQLFLHSLRKQCNLSFPRRVFVPWLADMYICDYLQPSETTAVLKEHCTELMSMEASMDMTTVLEPEKEALSLSAESFWDVAVPFQCGETSL
Subjt:  ANEVASEHVSQLFLHSLRKQCNLSFPRRVFVPWLADMYICDYLQPSETTAVLKEHCTELMSMEASMDMTTVLEPEKEALSLSAESFWDVAVPFQCGETSL

Query:  EKKNRDDGTITGSNATSSSKSS
        EKKNRDDGTITGSNATSSSKSS
Subjt:  EKKNRDDGTITGSNATSSSKSS

XP_022940460.1 protein odr-4 homolog isoform X2 [Cucurbita moschata]

3.4e-126

100

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Query:  MIDGNLVVSAPSTLGDLHEIELLLPFLKNTSLEACRQKEVDGIVVFRGSVCSFAYLNSKEPVSEAVTEIKGDIITSLQSRLDIICDEVDADKEAHDVHED
        MIDGNLVVSAPSTLGDLHEIELLLPFLKNTSLEACRQKEVDGIVVFRGSVCSFAYLNSKEPVSEAVTEIKGDIITSLQSRLDIICDEVDADKEAHDVHED
Subjt:  MIDGNLVVSAPSTLGDLHEIELLLPFLKNTSLEACRQKEVDGIVVFRGSVCSFAYLNSKEPVSEAVTEIKGDIITSLQSRLDIICDEVDADKEAHDVHED

Query:  ANEVASEHVSQLFLHSLRKQCNLSFPRRVFVPWLADMYICDYLQPSETTAVLKEHCTELMSMEASMDMTTVLEPEKEALSLSAESFWDVAVPFQCGETSL
        ANEVASEHVSQLFLHSLRKQCNLSFPRRVFVPWLADMYICDYLQPSETTAVLKEHCTELMSMEASMDMTTVLEPEKEALSLSAESFWDVAVPFQCGETSL
Subjt:  ANEVASEHVSQLFLHSLRKQCNLSFPRRVFVPWLADMYICDYLQPSETTAVLKEHCTELMSMEASMDMTTVLEPEKEALSLSAESFWDVAVPFQCGETSL

Query:  EKKNRDDGTITGSNATSSSKSSDFALYRWMAVI
        EKKNRDDGTITGSNATSSSKSSDFALYRWMAVI
Subjt:  EKKNRDDGTITGSNATSSSKSSDFALYRWMAVI

XP_022980980.1 protein odr-4 homolog isoform X2 [Cucurbita maxima]

6.6e-122

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Query:  MIDGNLVVSAPSTLGDLHEIELLLPFLKNTSLEACRQKEVDGIVVFRGSVCSFAYLNSKEPVSEAVTEIKGDIITSLQSRLDIICDEVDADKEAHDVHED
        MIDGNLVVSAPSTLGDLHEIELLLPFLK+TSLEACRQKEVDGIVV RGSVCSFAYLNSKEPVSEAVTEIKGDIITSLQSRLDIICDEVDADKEAHDVHED
Subjt:  MIDGNLVVSAPSTLGDLHEIELLLPFLKNTSLEACRQKEVDGIVVFRGSVCSFAYLNSKEPVSEAVTEIKGDIITSLQSRLDIICDEVDADKEAHDVHED

Query:  ANEVASEHVSQLFLHSLRKQCNLSFPRRVFVPWLADMYICDYLQPSETTAVLKEHCTELMSMEASMDMTTVLEPEKEALSLSAESFWDVAVPFQCGETSL
        ANEVASEHVSQLFLHSLRKQCNLSFPRRVFVPWLAD+YICDYLQPSETTAVLKEHCTELMSMEA MDMTTVLEPEKEALSLSAESFWDVAVPFQC ETSL
Subjt:  ANEVASEHVSQLFLHSLRKQCNLSFPRRVFVPWLADMYICDYLQPSETTAVLKEHCTELMSMEASMDMTTVLEPEKEALSLSAESFWDVAVPFQCGETSL

Query:  EKKNRDDGTITGSNATSSSKSSDFALYRWMAVI
        EKKNR+DGTITGS ATSSSKSSDFALYRWMAVI
Subjt:  EKKNRDDGTITGSNATSSSKSSDFALYRWMAVI

XP_023525737.1 protein odr-4 homolog isoform X2 [Cucurbita pepo subsp. pepo]

9.6e-121

96.57

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Query:  MIDGNLVVSAPSTLGDLHEIELLLPFLKNTSLEACRQKEVDGIVVFRGSVCSFAYLNSKEPVSEAVTEIKGDIITSLQSRLDIICDEVDADKEAHDVHED
        MIDGNLVVSAPSTLGDLHEIELLLPFLK+TSLEACRQKEVDGIVVFRGSVCSFAYLNSKEPVSEAVTEIKGDIITSLQSRLDIICDEVDADKEA DVHED
Subjt:  MIDGNLVVSAPSTLGDLHEIELLLPFLKNTSLEACRQKEVDGIVVFRGSVCSFAYLNSKEPVSEAVTEIKGDIITSLQSRLDIICDEVDADKEAHDVHED

Query:  ANEVASEHVSQLFLHSLRKQCNLSFPRRVFVPWLADMYICDYLQPSETTAVLKEHCTELMSMEASMDMTTVLEPEKEALSLSAESFWDVAVPFQCGETSL
        ANEVASEHVSQLFLHSLRKQCNLSFPRRVFVPWLAD+YICDYLQPSETT VLKEHCTELMSMEASMDMTTVLEPEKEALSLSAESFWDVAVPFQC ETSL
Subjt:  ANEVASEHVSQLFLHSLRKQCNLSFPRRVFVPWLADMYICDYLQPSETTAVLKEHCTELMSMEASMDMTTVLEPEKEALSLSAESFWDVAVPFQCGETSL

Query:  EKKNRDDGTITGSNATSSSKSSDFALYRWMAVI
        EKKNRDD T T SNATSSSKSSDFALYRWMAVI
Subjt:  EKKNRDDGTITGSNATSSSKSSDFALYRWMAVI

TrEMBL top hits

e value

%identity

Alignment

A0A6J1DPI2 protein odr-4 homolog

2.2e-91

82.22

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Query:  MIDGNLVVS-APSTLGDLHEIELLLPFLKNTSLEACRQKEVDGIVVFRGSVCSFAYLNSKEPVSEAVTEIKGDIITSLQSRLDIICDEVDADKE-AHDVH
        ++DGNLVVS  PS  GDLHEIELLLPFLKNTSLEA  QK+VDGI+VFRGSVCSFAYLNSKEP+S+AVTEIKGDIITSLQSRL IICDEVDADKE   DVH
Subjt:  MIDGNLVVS-APSTLGDLHEIELLLPFLKNTSLEACRQKEVDGIVVFRGSVCSFAYLNSKEPVSEAVTEIKGDIITSLQSRLDIICDEVDADKE-AHDVH

Query:  EDANEVASE-HVSQLFLHSLRKQCNLSFPRRVFVPWLADMYICDYLQPSETTAVLKEHCTELMSMEASMDMTTVLEPEKEALSLSAESFWDVAVPFQCGE
         DANEVASE H+SQLFLHSLRK+CNLSFPRRVFVPWLA MYICDYLQPSETT VLKEHCTELMSMEA MDM+TVLEPE EALSLSAESFWDVA+PFQ  E
Subjt:  EDANEVASE-HVSQLFLHSLRKQCNLSFPRRVFVPWLADMYICDYLQPSETTAVLKEHCTELMSMEASMDMTTVLEPEKEALSLSAESFWDVAVPFQCGE

Query:  TSLEKKNRDDGTITGSNATSSSKSS
         S E KN +  T +GSN  S SKSS
Subjt:  TSLEKKNRDDGTITGSNATSSSKSS

A0A6J1FK69 protein odr-4 homolog isoform X1

1.9e-119

100

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Query:  MIDGNLVVSAPSTLGDLHEIELLLPFLKNTSLEACRQKEVDGIVVFRGSVCSFAYLNSKEPVSEAVTEIKGDIITSLQSRLDIICDEVDADKEAHDVHED
        MIDGNLVVSAPSTLGDLHEIELLLPFLKNTSLEACRQKEVDGIVVFRGSVCSFAYLNSKEPVSEAVTEIKGDIITSLQSRLDIICDEVDADKEAHDVHED
Subjt:  MIDGNLVVSAPSTLGDLHEIELLLPFLKNTSLEACRQKEVDGIVVFRGSVCSFAYLNSKEPVSEAVTEIKGDIITSLQSRLDIICDEVDADKEAHDVHED

Query:  ANEVASEHVSQLFLHSLRKQCNLSFPRRVFVPWLADMYICDYLQPSETTAVLKEHCTELMSMEASMDMTTVLEPEKEALSLSAESFWDVAVPFQCGETSL
        ANEVASEHVSQLFLHSLRKQCNLSFPRRVFVPWLADMYICDYLQPSETTAVLKEHCTELMSMEASMDMTTVLEPEKEALSLSAESFWDVAVPFQCGETSL
Subjt:  ANEVASEHVSQLFLHSLRKQCNLSFPRRVFVPWLADMYICDYLQPSETTAVLKEHCTELMSMEASMDMTTVLEPEKEALSLSAESFWDVAVPFQCGETSL

Query:  EKKNRDDGTITGSNATSSSKSS
        EKKNRDDGTITGSNATSSSKSS
Subjt:  EKKNRDDGTITGSNATSSSKSS

A0A6J1FQM4 protein odr-4 homolog isoform X2

1.6e-126

100

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Query:  MIDGNLVVSAPSTLGDLHEIELLLPFLKNTSLEACRQKEVDGIVVFRGSVCSFAYLNSKEPVSEAVTEIKGDIITSLQSRLDIICDEVDADKEAHDVHED
        MIDGNLVVSAPSTLGDLHEIELLLPFLKNTSLEACRQKEVDGIVVFRGSVCSFAYLNSKEPVSEAVTEIKGDIITSLQSRLDIICDEVDADKEAHDVHED
Subjt:  MIDGNLVVSAPSTLGDLHEIELLLPFLKNTSLEACRQKEVDGIVVFRGSVCSFAYLNSKEPVSEAVTEIKGDIITSLQSRLDIICDEVDADKEAHDVHED

Query:  ANEVASEHVSQLFLHSLRKQCNLSFPRRVFVPWLADMYICDYLQPSETTAVLKEHCTELMSMEASMDMTTVLEPEKEALSLSAESFWDVAVPFQCGETSL
        ANEVASEHVSQLFLHSLRKQCNLSFPRRVFVPWLADMYICDYLQPSETTAVLKEHCTELMSMEASMDMTTVLEPEKEALSLSAESFWDVAVPFQCGETSL
Subjt:  ANEVASEHVSQLFLHSLRKQCNLSFPRRVFVPWLADMYICDYLQPSETTAVLKEHCTELMSMEASMDMTTVLEPEKEALSLSAESFWDVAVPFQCGETSL

Query:  EKKNRDDGTITGSNATSSSKSSDFALYRWMAVI
        EKKNRDDGTITGSNATSSSKSSDFALYRWMAVI
Subjt:  EKKNRDDGTITGSNATSSSKSSDFALYRWMAVI

A0A6J1IY46 protein odr-4 homolog isoform X2

3.2e-122

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Query:  MIDGNLVVSAPSTLGDLHEIELLLPFLKNTSLEACRQKEVDGIVVFRGSVCSFAYLNSKEPVSEAVTEIKGDIITSLQSRLDIICDEVDADKEAHDVHED
        MIDGNLVVSAPSTLGDLHEIELLLPFLK+TSLEACRQKEVDGIVV RGSVCSFAYLNSKEPVSEAVTEIKGDIITSLQSRLDIICDEVDADKEAHDVHED
Subjt:  MIDGNLVVSAPSTLGDLHEIELLLPFLKNTSLEACRQKEVDGIVVFRGSVCSFAYLNSKEPVSEAVTEIKGDIITSLQSRLDIICDEVDADKEAHDVHED

Query:  ANEVASEHVSQLFLHSLRKQCNLSFPRRVFVPWLADMYICDYLQPSETTAVLKEHCTELMSMEASMDMTTVLEPEKEALSLSAESFWDVAVPFQCGETSL
        ANEVASEHVSQLFLHSLRKQCNLSFPRRVFVPWLAD+YICDYLQPSETTAVLKEHCTELMSMEA MDMTTVLEPEKEALSLSAESFWDVAVPFQC ETSL
Subjt:  ANEVASEHVSQLFLHSLRKQCNLSFPRRVFVPWLADMYICDYLQPSETTAVLKEHCTELMSMEASMDMTTVLEPEKEALSLSAESFWDVAVPFQCGETSL

Query:  EKKNRDDGTITGSNATSSSKSSDFALYRWMAVI
        EKKNR+DGTITGS ATSSSKSSDFALYRWMAVI
Subjt:  EKKNRDDGTITGSNATSSSKSSDFALYRWMAVI

A0A6J1J0R7 protein odr-4 homolog isoform X1

3.8e-115

96.85

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Query:  MIDGNLVVSAPSTLGDLHEIELLLPFLKNTSLEACRQKEVDGIVVFRGSVCSFAYLNSKEPVSEAVTEIKGDIITSLQSRLDIICDEVDADKEAHDVHED
        MIDGNLVVSAPSTLGDLHEIELLLPFLK+TSLEACRQKEVDGIVV RGSVCSFAYLNSKEPVSEAVTEIKGDIITSLQSRLDIICDEVDADKEAHDVHED
Subjt:  MIDGNLVVSAPSTLGDLHEIELLLPFLKNTSLEACRQKEVDGIVVFRGSVCSFAYLNSKEPVSEAVTEIKGDIITSLQSRLDIICDEVDADKEAHDVHED

Query:  ANEVASEHVSQLFLHSLRKQCNLSFPRRVFVPWLADMYICDYLQPSETTAVLKEHCTELMSMEASMDMTTVLEPEKEALSLSAESFWDVAVPFQCGETSL
        ANEVASEHVSQLFLHSLRKQCNLSFPRRVFVPWLAD+YICDYLQPSETTAVLKEHCTELMSMEA MDMTTVLEPEKEALSLSAESFWDVAVPFQC ETSL
Subjt:  ANEVASEHVSQLFLHSLRKQCNLSFPRRVFVPWLADMYICDYLQPSETTAVLKEHCTELMSMEASMDMTTVLEPEKEALSLSAESFWDVAVPFQCGETSL

Query:  EKKNRDDGTITGSNATSSSKSS
        EKKNR+DGTITGS ATSSSKSS
Subjt:  EKKNRDDGTITGSNATSSSKSS

SwissProt top hits

e value

%identity

Alignment

Q54QH3 Protein odr-4 homolog

1.5e-04

31.25

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Query:  AYLNSKEPVSEAVTEIKGDIITSLQSRLDIICDEVDADKEAHDVHEDANEVASEHVSQLFLHSLRKQCNLSFPRRVFVPWLAD-MYICDYLQPSET
        AY++  E +  A   IK DII S++SR D++ +E+ ++   +D  +D  +++ E               L  PRRV + WL++ + ICDYL  + T
Subjt:  AYLNSKEPVSEAVTEIKGDIITSLQSRLDIICDEVDADKEAHDVHEDANEVASEHVSQLFLHSLRKQCNLSFPRRVFVPWLAD-MYICDYLQPSET

Arabidopsis top hits

e value

%identity

Alignment

AT3G28670.1 oxidoreductase, zinc-binding dehydrogenase family protein

4.7e-49

50.22

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Query:  MIDGNLVVS-APSTLGDLHEIELLLPFLKNTSLEACRQKEVDGIVVFRGSVCSFAYLNSKEPVSEAVTEIKGDIITSLQSRLDIICDEVDADKEAHDV--
        MIDG+LV +  P      HEIELL PF+K+T  EA   K V GI++F GSV S+AYLN KEPVS+A+ +IK DII SLQSRLDIICDE + D    DV  
Subjt:  MIDGNLVVS-APSTLGDLHEIELLLPFLKNTSLEACRQKEVDGIVVFRGSVCSFAYLNSKEPVSEAVTEIKGDIITSLQSRLDIICDEVDADKEAHDV--

Query:  HEDANEVASEHVSQLFLHSLRKQCNLSFPRRVFVPWLADMYICDYLQPSETTAVLKEHCTELMSME-ASMDMTTVLEPEKEALSLSAESFWDVAVP----
        +E+A+ ++   +S+L L+S  K C+L  PRRV VPWL+ M+ICDYLQP E+  V+KE C ELMSME +S+D + + E E E   L AES WDV  P    
Subjt:  HEDANEVASEHVSQLFLHSLRKQCNLSFPRRVFVPWLADMYICDYLQPSETTAVLKEHCTELMSME-ASMDMTTVLEPEKEALSLSAESFWDVAVP----

Query:  --FQCGETSLEKKNRDDGTITGSNATSSS
          F  G       + +D T   SNA+++S
Subjt:  --FQCGETSLEKKNRDDGTITGSNATSSS

Sequences

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CDS sequence

Show/hide CDS sequence

ATGATTGATGGCAATCTGGTGGTTAGTGCCCCTTCTACTTTAGGAGACTTGCATGAAATTGAATTACTCCTACCATTCCTGAAAAATACGTCTCTTGAAGCGTGCAGACA
AAAAGAGGTTGATGGTATCGTTGTCTTTAGAGGCTCGGTTTGTTCATTTGCTTATTTGAATTCAAAAGAACCCGTTTCCGAAGCTGTAACGGAAATTAAGGGAGATATCA
TCACAAGTTTACAGAGTAGACTGGACATAATATGCGATGAGGTTGACGCAGATAAGGAAGCACATGACGTTCATGAGGATGCAAATGAAGTGGCATCAGAACATGTTTCT
CAGCTCTTCCTTCACTCGTTGAGGAAACAGTGCAACCTCTCATTTCCTCGAAGAGTGTTTGTTCCTTGGTTGGCAGACATGTACATCTGCGACTATTTGCAACCATCTGA
GACCACTGCGGTTTTAAAAGAACACTGTACCGAATTAATGTCCATGGAAGCATCAATGGACATGACGACAGTTCTTGAACCAGAAAAGGAGGCTCTTTCCCTCTCAGCAG
AATCATTTTGGGATGTGGCTGTACCCTTCCAATGCGGGGAGACTTCATTAGAGAAGAAAAACAGAGACGATGGCACGATAACTGGCAGTAATGCAACTTCAAGCAGCAAG
TCGAGTGATTTCGCTCTTTATAGATGGATGGCAGTCATT

mRNA sequence

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Protein sequence

Show/hide protein sequence

MIDGNLVVSAPSTLGDLHEIELLLPFLKNTSLEACRQKEVDGIVVFRGSVCSFAYLNSKEPVSEAVTEIKGDIITSLQSRLDIICDEVDADKEAHDVHEDANEVASEHVS
QLFLHSLRKQCNLSFPRRVFVPWLADMYICDYLQPSETTAVLKEHCTELMSMEASMDMTTVLEPEKEALSLSAESFWDVAVPFQCGETSLEKKNRDDGTITGSNATSSSK
SSDFALYRWMAVI

Carg00413 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome