; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg00419 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg00419
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionXIAP-associated factor 1-like
Genome locationCarg_Chr04:7160115..7163377
RNA-Seq ExpressionCarg00419
SyntenyCarg00419
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7031761.1 TRAF-type zinc finger domain-containing protein 1 [Cucurbita argyrosperma subsp. argyrosperma]4.4e-73100Show/hide
Query:  MERDILAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCRRYIRLRERYSHENNCENVAAADNIAESSRDVGSAPPEREEARGRGARRR
        MERDILAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCRRYIRLRERYSHENNCENVAAADNIAESSRDVGSAPPEREEARGRGARRR
Subjt:  MERDILAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCRRYIRLRERYSHENNCENVAAADNIAESSRDVGSAPPEREEARGRGARRR

Query:  QPQEFSTRRLIFTIAITGIAVLLGSLFFQKKGENNVVH
        QPQEFSTRRLIFTIAITGIAVLLGSLFFQKKGENNVVH
Subjt:  QPQEFSTRRLIFTIAITGIAVLLGSLFFQKKGENNVVH

XP_022940915.1 XIAP-associated factor 1-like [Cucurbita moschata]7.5e-7398.55Show/hide
Query:  MERDILAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCRRYIRLRERYSHENNCENVAAADNIAESSRDVGSAPPEREEARGRGARRR
        MERD+LAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCRRY+RLRERYSHENNCENVAAADNIAESSRDVGSAPPEREEARGRGARRR
Subjt:  MERDILAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCRRYIRLRERYSHENNCENVAAADNIAESSRDVGSAPPEREEARGRGARRR

Query:  QPQEFSTRRLIFTIAITGIAVLLGSLFFQKKGENNVVH
        QPQEFSTRRLIFTIAITGIAVLLGSLFFQKKGENNVVH
Subjt:  QPQEFSTRRLIFTIAITGIAVLLGSLFFQKKGENNVVH

XP_022975863.1 XIAP-associated factor 1-like [Cucurbita maxima]2.2e-6488.41Show/hide
Query:  MERDILAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCRRYIRLRERYSHENNCENVAAADNIAESSRDVGSAPPEREEARGRGARRR
        MERDILAIHKGENCPQRIVTCEFCEFPLPA+DLAEHQEVCGNRTELCHLCRRYIRLRERYSHENNC+ VAAAD +AESSRDVG+A PER++ R RGARRR
Subjt:  MERDILAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCRRYIRLRERYSHENNCENVAAADNIAESSRDVGSAPPEREEARGRGARRR

Query:  QPQEFSTRRLIFTIAITGIAVLLGSLFFQKKGENNVVH
        QPQEFSTRRLIFTIAITGIAVLLGSLFFQ+K E+N++H
Subjt:  QPQEFSTRRLIFTIAITGIAVLLGSLFFQKKGENNVVH

XP_022981055.1 XIAP-associated factor 1-like [Cucurbita maxima]4.9e-7298.55Show/hide
Query:  MERDILAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCRRYIRLRERYSHENNCENVAAADNIAESSRDVGSAPPEREEARGRGARRR
        MERDILAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCRRYIRLRERYSHENNCENVAAAD+IAESSRDVGSAPPEREEARGRGA+RR
Subjt:  MERDILAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCRRYIRLRERYSHENNCENVAAADNIAESSRDVGSAPPEREEARGRGARRR

Query:  QPQEFSTRRLIFTIAITGIAVLLGSLFFQKKGENNVVH
        QPQEFSTRRLIFTIAITGIAVLLGSLFFQKKGENNVVH
Subjt:  QPQEFSTRRLIFTIAITGIAVLLGSLFFQKKGENNVVH

XP_023524658.1 XIAP-associated factor 1-like [Cucurbita pepo subsp. pepo]4.4e-73100Show/hide
Query:  MERDILAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCRRYIRLRERYSHENNCENVAAADNIAESSRDVGSAPPEREEARGRGARRR
        MERDILAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCRRYIRLRERYSHENNCENVAAADNIAESSRDVGSAPPEREEARGRGARRR
Subjt:  MERDILAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCRRYIRLRERYSHENNCENVAAADNIAESSRDVGSAPPEREEARGRGARRR

Query:  QPQEFSTRRLIFTIAITGIAVLLGSLFFQKKGENNVVH
        QPQEFSTRRLIFTIAITGIAVLLGSLFFQKKGENNVVH
Subjt:  QPQEFSTRRLIFTIAITGIAVLLGSLFFQKKGENNVVH

TrEMBL top hitse value%identityAlignment
A0A6J1CBB2 XIAP-associated factor 12.9e-6288.41Show/hide
Query:  MERDILAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCRRYIRLRERYSHENNCENVAAADNIAESSRDVGSAPPEREEARGRGARRR
        MERDILA HKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCRRYIRLRERYSH+NNC+ VAAADNIAESSRDVG AP    E R  GARRR
Subjt:  MERDILAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCRRYIRLRERYSHENNCENVAAADNIAESSRDVGSAPPEREEARGRGARRR

Query:  QPQEFSTRRLIFTIAITGIAVLLGSLFFQKKGENNVVH
        QPQEFSTRRLIFTIAITGIAVLLGSLFFQ+K  N+VVH
Subjt:  QPQEFSTRRLIFTIAITGIAVLLGSLFFQKKGENNVVH

A0A6J1F858 XIAP-associated factor 1-like1.4e-6488.41Show/hide
Query:  MERDILAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCRRYIRLRERYSHENNCENVAAADNIAESSRDVGSAPPEREEARGRGARRR
        MERDILAIHKGENCPQRIVTCEFCEFPLPA+DLAEHQEVCGNRTELCHLCRRYIRLRERYSHENNC+ V AAD +AESSRDVG+A PER++ R RGARRR
Subjt:  MERDILAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCRRYIRLRERYSHENNCENVAAADNIAESSRDVGSAPPEREEARGRGARRR

Query:  QPQEFSTRRLIFTIAITGIAVLLGSLFFQKKGENNVVH
        QPQEFSTRRLIFTIAITGIAVLLGSLFFQ+K E+N+VH
Subjt:  QPQEFSTRRLIFTIAITGIAVLLGSLFFQKKGENNVVH

A0A6J1FS21 XIAP-associated factor 1-like3.6e-7398.55Show/hide
Query:  MERDILAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCRRYIRLRERYSHENNCENVAAADNIAESSRDVGSAPPEREEARGRGARRR
        MERD+LAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCRRY+RLRERYSHENNCENVAAADNIAESSRDVGSAPPEREEARGRGARRR
Subjt:  MERDILAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCRRYIRLRERYSHENNCENVAAADNIAESSRDVGSAPPEREEARGRGARRR

Query:  QPQEFSTRRLIFTIAITGIAVLLGSLFFQKKGENNVVH
        QPQEFSTRRLIFTIAITGIAVLLGSLFFQKKGENNVVH
Subjt:  QPQEFSTRRLIFTIAITGIAVLLGSLFFQKKGENNVVH

A0A6J1IKG6 XIAP-associated factor 1-like1.1e-6488.41Show/hide
Query:  MERDILAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCRRYIRLRERYSHENNCENVAAADNIAESSRDVGSAPPEREEARGRGARRR
        MERDILAIHKGENCPQRIVTCEFCEFPLPA+DLAEHQEVCGNRTELCHLCRRYIRLRERYSHENNC+ VAAAD +AESSRDVG+A PER++ R RGARRR
Subjt:  MERDILAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCRRYIRLRERYSHENNCENVAAADNIAESSRDVGSAPPEREEARGRGARRR

Query:  QPQEFSTRRLIFTIAITGIAVLLGSLFFQKKGENNVVH
        QPQEFSTRRLIFTIAITGIAVLLGSLFFQ+K E+N++H
Subjt:  QPQEFSTRRLIFTIAITGIAVLLGSLFFQKKGENNVVH

A0A6J1IYD6 XIAP-associated factor 1-like2.4e-7298.55Show/hide
Query:  MERDILAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCRRYIRLRERYSHENNCENVAAADNIAESSRDVGSAPPEREEARGRGARRR
        MERDILAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCRRYIRLRERYSHENNCENVAAAD+IAESSRDVGSAPPEREEARGRGA+RR
Subjt:  MERDILAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCRRYIRLRERYSHENNCENVAAADNIAESSRDVGSAPPEREEARGRGARRR

Query:  QPQEFSTRRLIFTIAITGIAVLLGSLFFQKKGENNVVH
        QPQEFSTRRLIFTIAITGIAVLLGSLFFQKKGENNVVH
Subjt:  QPQEFSTRRLIFTIAITGIAVLLGSLFFQKKGENNVVH

SwissProt top hitse value%identityAlignment
O14545 TRAF-type zinc finger domain-containing protein 12.3e-0834.85Show/hide
Query:  MERDILAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCRRYIRLRERYSHENNC
        +E+ +L  H+   CP R+  C+ C+  L  + L EH++ CG RTELC  C R + +++  +H   C
Subjt:  MERDILAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCRRYIRLRERYSHENNC

Q3UDK1 TRAF-type zinc finger domain-containing protein 16.1e-0932.95Show/hide
Query:  MERDILAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCRRYIRLRERYSHENNCENVAAADNIAESSRDVGSAPPE
        +E+  L  H    CP R+  C+ C+  L  + L EH++ CG RTELC  C R + ++E  +H   C        + E  R   + PPE
Subjt:  MERDILAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCRRYIRLRERYSHENNCENVAAADNIAESSRDVGSAPPE

Q4R970 TRAF-type zinc finger domain-containing protein 12.3e-0834.85Show/hide
Query:  MERDILAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCRRYIRLRERYSHENNC
        +E+ +L  H+   CP R+  C+ C+  L  + L EH++ CG RTELC  C R + +++  +H   C
Subjt:  MERDILAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCRRYIRLRERYSHENNC

Q58D05 TRAF-type zinc finger domain-containing protein 11.1e-0733.33Show/hide
Query:  MERDILAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCRRYIRLRERYSHENNC
        +E+  L  H+   CP R+  C+ C+  L  + L +H++ CG RTELC  C R + +++  +H   C
Subjt:  MERDILAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCRRYIRLRERYSHENNC

Q99MM4 TRAF-type zinc finger domain-containing protein 16.1e-0932.95Show/hide
Query:  MERDILAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCRRYIRLRERYSHENNCENVAAADNIAESSRDVGSAPPE
        +E+  L  H    CP R+  C+ C+  L  + L EH++ CG RTELC  C R + ++E  +H       A    + E  R   + PPE
Subjt:  MERDILAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCRRYIRLRERYSHENNCENVAAADNIAESSRDVGSAPPE

Arabidopsis top hitse value%identityAlignment
AT1G09920.1 TRAF-type zinc finger-related6.2e-4161.65Show/hide
Query:  MERDILAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCRRYIRLRERYSHENNCENVAAADNIAESSRDVGSAPPEREEARGRGARRR
        +ER+I   HKGE CP+RIVTCEFCEFPLPA+DLAEHQEVCGNRTELC+ C  Y+RLRERY+HE  C          ESSR +    P   E  G G RRR
Subjt:  MERDILAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCRRYIRLRERYSHENNCENVAAADNIAESSRDVGSAPPEREEARGRGARRR

Query:  QPQEFSTRRLIFTIAITGIAVLLGSLFFQKKGE
             S +RL FTIAITGIAV++GSLFFQ+K E
Subjt:  QPQEFSTRRLIFTIAITGIAVLLGSLFFQKKGE

AT4G15420.1 Ubiquitin fusion degradation UFD1 family protein1.0e-0631.08Show/hide
Query:  MERDILAIHKGENCPQRIVTCEFC----EFPLPAID-------LAEHQEVCGNRTELCHLCRRYIRLRERYSHE
        +E++ +  H+G++CP R++ C FC    E    A D       ++EH+  CG+RT  C  C R + L++   H+
Subjt:  MERDILAIHKGENCPQRIVTCEFC----EFPLPAID-------LAEHQEVCGNRTELCHLCRRYIRLRERYSHE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACGGGACATTTTAGCCATTCATAAAGGTGAAAATTGCCCTCAAAGGATTGTTACTTGCGAGTTTTGTGAGTTCCCATTGCCAGCAATAGATTTGGCTGAGCATCA
GGAGGTATGTGGTAACCGGACCGAGCTTTGTCATCTGTGTCGCCGATATATAAGACTGCGAGAAAGATATAGTCATGAGAATAATTGCGAGAATGTTGCAGCAGCAGATA
ATATAGCGGAGTCTTCCAGGGATGTGGGGTCAGCACCACCAGAAAGAGAAGAAGCTAGAGGTCGAGGCGCTCGAAGAAGACAGCCGCAGGAGTTTTCTACCCGACGCCTT
ATATTCACTATTGCAATAACAGGTATTGCCGTTCTATTAGGATCCTTATTTTTCCAGAAAAAGGGCGAGAACAATGTGGTACACTGA
mRNA sequenceShow/hide mRNA sequence
TTTTTATTTAGGTAAATGGTGGGTGAGGTGGATCGTCTCCATTCGTGAAAGTCATTCACTCGATGAGAAGTAGTTGAATCGAAGTCGGTTGCTCTTTGTTCTCCAAGCGT
TATCGATCCACGGCGACGAATTTCTAGCGCTCAGTTATTGTTTACCTAATTTTGACGGACCTTGTACAACGATCGCCTACGTTCTGTTCGTTCGTTCCGATGGCAGTTGC
ATCCGAAGCGACCACAAGCTTATGCAGTCACTGCGGCCGAGACATTCCGTCGACAAATATCGATCTGCATTCTGTTCATTGCGAGCGGAACCTAGAGAAATGTAAAATAT
GCGGCGATATGGTTCCTAAAAGACATGCGGAGGAACATTTCCTGAACACCCATGCTTCTGTACGATGACTGCTACTCTATGTTTCTCTTCCGCTTTCTCTCTTAATTTAG
GTTTTTGTTCCAATTTGTTGCATTGTTTATACAGCTTCGATTATAACATTAAGCTTGAGGGTTATGATTCTGTATAGTTTAGGTTGTGGCTCTACGGTCTTTGGATAAGG
ATTAGTGGTAGTTCTTTGAATTATTGGAATTTCAAGTGTTTATGGCCTTGTATTTCGACAGGTTTCCTGTTCACTGTGTAGCGAGACCATGGAACGGGACATTTTAGCCA
TTCATAAAGGTGAAAATTGCCCTCAAAGGATTGTTACTTGCGAGTTTTGTGAGTTCCCATTGCCAGCAATAGATTTGGCTGAGCATCAGGAGGTATGTGGTAACCGGACC
GAGCTTTGTCATCTGTGTCGCCGATATATAAGACTGCGAGAAAGATATAGTCATGAGAATAATTGCGAGAATGTTGCAGCAGCAGATAATATAGCGGAGTCTTCCAGGGA
TGTGGGGTCAGCACCACCAGAAAGAGAAGAAGCTAGAGGTCGAGGCGCTCGAAGAAGACAGCCGCAGGAGTTTTCTACCCGACGCCTTATATTCACTATTGCAATAACAG
GTATTGCCGTTCTATTAGGATCCTTATTTTTCCAGAAAAAGGGCGAGAACAATGTGGTACACTGATTGCTGGTGAGGTGAGGTAGGTACGTCCCACAGAGTGGAGAATAT
TCCATGTAAAAAAAGAAAAAGAAACCCTTCCATTTTTCTGTACCAAGAAATATTAGACAACTACTGTAAACTCGTAACATTTGGGCGGAGATTTCGATCCGACGGCTCTA
CTCCTTTGTTCTTAAGGCTATGTATGATGAGTTTGAATCTCTTCTCAGAATAATATTAATGCAACATTTATATTTTATTTTTAGGGAAAAATTATTAAATGTGGCTATTT
TTGGGTTTAGAATATATTTTTCAGTCTCTTATTGAGTAAAATTACGAGAAAGTCCCTGTCAAATTCCATCAATCCCCACCTGTCTCCTCAGTTGTTATTCTTTGTATAAC
CATCATTATCTTTTGAAAATTTGTTTTCA
Protein sequenceShow/hide protein sequence
MERDILAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCRRYIRLRERYSHENNCENVAAADNIAESSRDVGSAPPEREEARGRGARRRQPQEFSTRRL
IFTIAITGIAVLLGSLFFQKKGENNVVH