CuGenDBv2

Gene ID	Carg00504
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Unknown protein
Genome location	Carg_Chr03:5347829..5348374
RNA-Seq Expression	Carg00504
Synteny	Carg00504
Gene Ontology terms	GO:0009536 - plastid (cellular component) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR008470 - Uncharacterised protein family Ycf33

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004134802.1 uncharacterized protein LOC101208124 [Cucumis sativus]

8.6e-69

78.45

Show/hide

Query:  MATSFRSRIHHVPISPTFKNPSVSPPPFPIKATSPLRGSFRPLAASAPPQSPAKPLKTPQPLDFKIIDETPIGNSRFLIIGAVSVGVALFLMGCDGDRAL
        MATSF +     P  PTFK P +S P FPIK  SP+R  FRPLA+SAPPQSPAKPLK P P DFK I+ TP G SRFLIIGAVSVGVALFL+GCDG+RAL
Subjt:  MATSFRSRIHHVPISPTFKNPSVSPPPFPIKATSPLRGSFRPLAASAPPQSPAKPLKTPQPLDFKIIDETPIGNSRFLIIGAVSVGVALFLMGCDGDRAL

Query:  ALGPEGPLVEEFWDNVRRYAIYAVTVSSGALYTILLPIFELLKNPITAVLVLAIFGGAIFVISQVLSAMVGVNEFSYDYAY
        ALGPEGPLVEEFWDNVRRYA+YA+TVS+GA+YTILLPI ELLKNPITAVLVL IFGGAIF+ISQVLSAMVGV EFSYDY Y
Subjt:  ALGPEGPLVEEFWDNVRRYAIYAVTVSSGALYTILLPIFELLKNPITAVLVLAIFGGAIFVISQVLSAMVGVNEFSYDYAY

XP_022949889.1 uncharacterized protein LOC111453148 [Cucurbita moschata]

5.0e-93

100

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Query:  MATSFRSRIHHVPISPTFKNPSVSPPPFPIKATSPLRGSFRPLAASAPPQSPAKPLKTPQPLDFKIIDETPIGNSRFLIIGAVSVGVALFLMGCDGDRAL
        MATSFRSRIHHVPISPTFKNPSVSPPPFPIKATSPLRGSFRPLAASAPPQSPAKPLKTPQPLDFKIIDETPIGNSRFLIIGAVSVGVALFLMGCDGDRAL
Subjt:  MATSFRSRIHHVPISPTFKNPSVSPPPFPIKATSPLRGSFRPLAASAPPQSPAKPLKTPQPLDFKIIDETPIGNSRFLIIGAVSVGVALFLMGCDGDRAL

Query:  ALGPEGPLVEEFWDNVRRYAIYAVTVSSGALYTILLPIFELLKNPITAVLVLAIFGGAIFVISQVLSAMVGVNEFSYDYAY
        ALGPEGPLVEEFWDNVRRYAIYAVTVSSGALYTILLPIFELLKNPITAVLVLAIFGGAIFVISQVLSAMVGVNEFSYDYAY
Subjt:  ALGPEGPLVEEFWDNVRRYAIYAVTVSSGALYTILLPIFELLKNPITAVLVLAIFGGAIFVISQVLSAMVGVNEFSYDYAY

XP_022979034.1 uncharacterized protein LOC111478796 [Cucurbita maxima]

1.4e-87

95.03

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Query:  MATSFRSRIHHVPISPTFKNPSVSPPPFPIKATSPLRGSFRPLAASAPPQSPAKPLKTPQPLDFKIIDETPIGNSRFLIIGAVSVGVALFLMGCDGDRAL
        MATSFRSRIHH PISPTFK+PSVSPPPFPIKATSPLRG FRPLAASAPPQS AKPLKTPQPLDFKIIDETPIGNSRFLIIGAVSVGVALFLMGC+G+RAL
Subjt:  MATSFRSRIHHVPISPTFKNPSVSPPPFPIKATSPLRGSFRPLAASAPPQSPAKPLKTPQPLDFKIIDETPIGNSRFLIIGAVSVGVALFLMGCDGDRAL

Query:  ALGPEGPLVEEFWDNVRRYAIYAVTVSSGALYTILLPIFELLKNPITAVLVLAIFGGAIFVISQVLSAMVGVNEFSYDYAY
        ALGPEGPLVEEFWDNVRRYAIYAVTVS+GALYTILLPI ELLKNPITAVLVLAI GGAIFVISQVLSAMVGVNEFSYDYAY
Subjt:  ALGPEGPLVEEFWDNVRRYAIYAVTVSSGALYTILLPIFELLKNPITAVLVLAIFGGAIFVISQVLSAMVGVNEFSYDYAY

XP_023003383.1 uncharacterized protein LOC111497006 [Cucurbita maxima]

1.1e-66

78.45

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Query:  MATSFRSRIHHVPISPTFKNPSVSPPPFPIKATSPLRGSFRPLAASAPPQSPAKPLKTPQPLDFKIIDETPIGNSRFLIIGAVSVGVALFLMGCDGDRAL
        MATS R+RI H  I PT KNP +SPP  PI   +PLR  FRPLA+S+PP+SPAK  K   P D K I+  PI +SRFLIIGAVSVGVALFLMG DG+RAL
Subjt:  MATSFRSRIHHVPISPTFKNPSVSPPPFPIKATSPLRGSFRPLAASAPPQSPAKPLKTPQPLDFKIIDETPIGNSRFLIIGAVSVGVALFLMGCDGDRAL

Query:  ALGPEGPLVEEFWDNVRRYAIYAVTVSSGALYTILLPIFELLKNPITAVLVLAIFGGAIFVISQVLSAMVGVNEFSYDYAY
        ALGPEGPLVEEFWDNVRRYAIYAVTVSSGALYTILLPI ELLKNPITAVLVLAIFGG IF+ISQVLSAMVGVNEFSY+YAY
Subjt:  ALGPEGPLVEEFWDNVRRYAIYAVTVSSGALYTILLPIFELLKNPITAVLVLAIFGGAIFVISQVLSAMVGVNEFSYDYAY

XP_023543366.1 uncharacterized protein LOC111803269 [Cucurbita pepo subsp. pepo]

6.1e-91

97.79

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Query:  MATSFRSRIHHVPISPTFKNPSVSPPPFPIKATSPLRGSFRPLAASAPPQSPAKPLKTPQPLDFKIIDETPIGNSRFLIIGAVSVGVALFLMGCDGDRAL
        MATSFRSRIHH PISPTFKNPSVSPPPFPIKATSPLRG FRPLAASAPPQSPAKPLKTP PLDFKIIDETPIGNSRFLIIGAVSVGVALFLMGCDGDRAL
Subjt:  MATSFRSRIHHVPISPTFKNPSVSPPPFPIKATSPLRGSFRPLAASAPPQSPAKPLKTPQPLDFKIIDETPIGNSRFLIIGAVSVGVALFLMGCDGDRAL

Query:  ALGPEGPLVEEFWDNVRRYAIYAVTVSSGALYTILLPIFELLKNPITAVLVLAIFGGAIFVISQVLSAMVGVNEFSYDYAY
        ALGPEGPLVEEFWDNVRRYAIYAVTVS+GALYTILLPIFELLKNPITAVLVLAIFGGAIFVISQVLSAMVGVNEFSYDYAY
Subjt:  ALGPEGPLVEEFWDNVRRYAIYAVTVSSGALYTILLPIFELLKNPITAVLVLAIFGGAIFVISQVLSAMVGVNEFSYDYAY

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KHP7 Uncharacterized protein ycf33

4.2e-69

78.45

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Query:  MATSFRSRIHHVPISPTFKNPSVSPPPFPIKATSPLRGSFRPLAASAPPQSPAKPLKTPQPLDFKIIDETPIGNSRFLIIGAVSVGVALFLMGCDGDRAL
        MATSF +     P  PTFK P +S P FPIK  SP+R  FRPLA+SAPPQSPAKPLK P P DFK I+ TP G SRFLIIGAVSVGVALFL+GCDG+RAL
Subjt:  MATSFRSRIHHVPISPTFKNPSVSPPPFPIKATSPLRGSFRPLAASAPPQSPAKPLKTPQPLDFKIIDETPIGNSRFLIIGAVSVGVALFLMGCDGDRAL

Query:  ALGPEGPLVEEFWDNVRRYAIYAVTVSSGALYTILLPIFELLKNPITAVLVLAIFGGAIFVISQVLSAMVGVNEFSYDYAY
        ALGPEGPLVEEFWDNVRRYA+YA+TVS+GA+YTILLPI ELLKNPITAVLVL IFGGAIF+ISQVLSAMVGV EFSYDY Y
Subjt:  ALGPEGPLVEEFWDNVRRYAIYAVTVSSGALYTILLPIFELLKNPITAVLVLAIFGGAIFVISQVLSAMVGVNEFSYDYAY

A0A6J1EM42 Uncharacterized protein ycf33

6.7e-67

78.45

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Query:  MATSFRSRIHHVPISPTFKNPSVSPPPFPIKATSPLRGSFRPLAASAPPQSPAKPLKTPQPLDFKIIDETPIGNSRFLIIGAVSVGVALFLMGCDGDRAL
        MATS R+RI H  I PT KNP +SPP  PI   +PLR  FRPLA+S+PP+SPAK  K   P D K I+  PI +SRFLIIGAVSVGVALFLMG DG+RAL
Subjt:  MATSFRSRIHHVPISPTFKNPSVSPPPFPIKATSPLRGSFRPLAASAPPQSPAKPLKTPQPLDFKIIDETPIGNSRFLIIGAVSVGVALFLMGCDGDRAL

Query:  ALGPEGPLVEEFWDNVRRYAIYAVTVSSGALYTILLPIFELLKNPITAVLVLAIFGGAIFVISQVLSAMVGVNEFSYDYAY
        ALGPEGPLVEEFWDNVRRYAIYAVTVSSGALYTILLPI ELLKNPITAVLVLAIFGG IF+ISQVLSAMVGVNEFSY+YAY
Subjt:  ALGPEGPLVEEFWDNVRRYAIYAVTVSSGALYTILLPIFELLKNPITAVLVLAIFGGAIFVISQVLSAMVGVNEFSYDYAY

A0A6J1GE79 Uncharacterized protein ycf33

2.4e-93

100

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Query:  MATSFRSRIHHVPISPTFKNPSVSPPPFPIKATSPLRGSFRPLAASAPPQSPAKPLKTPQPLDFKIIDETPIGNSRFLIIGAVSVGVALFLMGCDGDRAL
        MATSFRSRIHHVPISPTFKNPSVSPPPFPIKATSPLRGSFRPLAASAPPQSPAKPLKTPQPLDFKIIDETPIGNSRFLIIGAVSVGVALFLMGCDGDRAL
Subjt:  MATSFRSRIHHVPISPTFKNPSVSPPPFPIKATSPLRGSFRPLAASAPPQSPAKPLKTPQPLDFKIIDETPIGNSRFLIIGAVSVGVALFLMGCDGDRAL

Query:  ALGPEGPLVEEFWDNVRRYAIYAVTVSSGALYTILLPIFELLKNPITAVLVLAIFGGAIFVISQVLSAMVGVNEFSYDYAY
        ALGPEGPLVEEFWDNVRRYAIYAVTVSSGALYTILLPIFELLKNPITAVLVLAIFGGAIFVISQVLSAMVGVNEFSYDYAY
Subjt:  ALGPEGPLVEEFWDNVRRYAIYAVTVSSGALYTILLPIFELLKNPITAVLVLAIFGGAIFVISQVLSAMVGVNEFSYDYAY

A0A6J1IVK7 Uncharacterized protein ycf33

6.9e-88

95.03

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Query:  MATSFRSRIHHVPISPTFKNPSVSPPPFPIKATSPLRGSFRPLAASAPPQSPAKPLKTPQPLDFKIIDETPIGNSRFLIIGAVSVGVALFLMGCDGDRAL
        MATSFRSRIHH PISPTFK+PSVSPPPFPIKATSPLRG FRPLAASAPPQS AKPLKTPQPLDFKIIDETPIGNSRFLIIGAVSVGVALFLMGC+G+RAL
Subjt:  MATSFRSRIHHVPISPTFKNPSVSPPPFPIKATSPLRGSFRPLAASAPPQSPAKPLKTPQPLDFKIIDETPIGNSRFLIIGAVSVGVALFLMGCDGDRAL

Query:  ALGPEGPLVEEFWDNVRRYAIYAVTVSSGALYTILLPIFELLKNPITAVLVLAIFGGAIFVISQVLSAMVGVNEFSYDYAY
        ALGPEGPLVEEFWDNVRRYAIYAVTVS+GALYTILLPI ELLKNPITAVLVLAI GGAIFVISQVLSAMVGVNEFSYDYAY
Subjt:  ALGPEGPLVEEFWDNVRRYAIYAVTVSSGALYTILLPIFELLKNPITAVLVLAIFGGAIFVISQVLSAMVGVNEFSYDYAY

A0A6J1KWC7 Uncharacterized protein ycf33

5.1e-67

78.45

Show/hide

Query:  MATSFRSRIHHVPISPTFKNPSVSPPPFPIKATSPLRGSFRPLAASAPPQSPAKPLKTPQPLDFKIIDETPIGNSRFLIIGAVSVGVALFLMGCDGDRAL
        MATS R+RI H  I PT KNP +SPP  PI   +PLR  FRPLA+S+PP+SPAK  K   P D K I+  PI +SRFLIIGAVSVGVALFLMG DG+RAL
Subjt:  MATSFRSRIHHVPISPTFKNPSVSPPPFPIKATSPLRGSFRPLAASAPPQSPAKPLKTPQPLDFKIIDETPIGNSRFLIIGAVSVGVALFLMGCDGDRAL

Query:  ALGPEGPLVEEFWDNVRRYAIYAVTVSSGALYTILLPIFELLKNPITAVLVLAIFGGAIFVISQVLSAMVGVNEFSYDYAY
        ALGPEGPLVEEFWDNVRRYAIYAVTVSSGALYTILLPI ELLKNPITAVLVLAIFGG IF+ISQVLSAMVGVNEFSY+YAY
Subjt:  ALGPEGPLVEEFWDNVRRYAIYAVTVSSGALYTILLPIFELLKNPITAVLVLAIFGGAIFVISQVLSAMVGVNEFSYDYAY

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G16410.1 unknown protein

1.5e-34

61.68

Show/hide

Query:  RFLIIGAVSVGVALFL-MGCDGDRALALGPEGPLVEEFWDNVRRYAIYAVTVSSGALYTILLPIFELLKNPITAVLVLAIFGGAIFVISQVLSAMVGVNE
        R+ ++G VSVG+ + L +G D ++A+ALGPEGPL+EEFWDNVRRY +YA+TVS+GAL  +  PIFELLKNPI+A+L+L I GG+ +++SQV+SAM+GVNE
Subjt:  RFLIIGAVSVGVALFL-MGCDGDRALALGPEGPLVEEFWDNVRRYAIYAVTVSSGALYTILLPIFELLKNPITAVLVLAIFGGAIFVISQVLSAMVGVNE

Query:  FSYDYAY
        F+Y Y+Y
Subjt:  FSYDYAY

Sequences

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CDS sequence

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ATGGCCACCTCTTTCAGATCCCGAATCCACCACGTCCCAATCTCCCCCACTTTCAAAAACCCCTCTGTTTCTCCTCCTCCATTTCCAATCAAGGCCACTTCCCCTCTCAG
AGGCTCTTTCCGGCCTCTCGCAGCCTCTGCGCCGCCGCAATCCCCCGCCAAACCCTTAAAAACTCCTCAGCCGTTGGATTTCAAGATAATCGACGAAACCCCAATTGGGA
ACTCTAGGTTTCTGATCATCGGAGCTGTCTCGGTGGGCGTTGCTCTGTTTCTGATGGGTTGCGATGGCGATAGGGCTCTGGCTTTGGGGCCTGAAGGGCCGTTGGTGGAG
GAATTCTGGGACAACGTAAGAAGATACGCAATTTACGCTGTCACTGTAAGTTCGGGTGCTCTTTACACTATTCTTCTTCCCATATTCGAGCTGCTGAAGAACCCCATTAC
TGCTGTTCTTGTTTTGGCTATTTTTGGGGGTGCCATTTTCGTTATTTCTCAAGTTCTATCTGCTATGGTTGGCGTCAATGAGTTTTCTTATGATTATGCCTATTGA

mRNA sequence

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Protein sequence

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MATSFRSRIHHVPISPTFKNPSVSPPPFPIKATSPLRGSFRPLAASAPPQSPAKPLKTPQPLDFKIIDETPIGNSRFLIIGAVSVGVALFLMGCDGDRALALGPEGPLVE
EFWDNVRRYAIYAVTVSSGALYTILLPIFELLKNPITAVLVLAIFGGAIFVISQVLSAMVGVNEFSYDYAY

Carg00504 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome