; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg00536 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg00536
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionRibosomal protein L11
Genome locationCarg_Chr03:5499120..5499587
RNA-Seq ExpressionCarg00536
SyntenyCarg00536
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0015934 - large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0070180 - large ribosomal subunit rRNA binding (molecular function)
InterPro domainsIPR000911 - Ribosomal protein L11/L12
IPR006519 - Ribosomal protein L11, bacterial-type
IPR020783 - Ribosomal protein L11, C-terminal
IPR020784 - Ribosomal protein L11, N-terminal
IPR036769 - Ribosomal protein L11, C-terminal domain superfamily
IPR036796 - Ribosomal protein L11/L12, N-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6603860.1 hypothetical protein SDJN03_04469, partial [Cucurbita argyrosperma subsp. sororia]1.9e-8099.35Show/hide
Query:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR
        MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNA TQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR
Subjt:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR

Query:  PGHVVASTLTVKHIYDIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVVKELD
        PGHVVASTLTVKHIYDIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVVKELD
Subjt:  PGHVVASTLTVKHIYDIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVVKELD

KAG7034038.1 mrpl19, partial [Cucurbita argyrosperma subsp. argyrosperma]2.2e-81100Show/hide
Query:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR
        MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR
Subjt:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR

Query:  PGHVVASTLTVKHIYDIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVVKELD
        PGHVVASTLTVKHIYDIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVVKELD
Subjt:  PGHVVASTLTVKHIYDIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVVKELD

XP_022950615.1 54S ribosomal protein L19, mitochondrial-like [Cucurbita moschata]1.9e-8098.71Show/hide
Query:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR
        MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGS R
Subjt:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR

Query:  PGHVVASTLTVKHIYDIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVVKELD
        PGHVVASTLTVKHIYDIAKVKQSDP+CQYMPLESICKSIIGTANSMGIKVVKELD
Subjt:  PGHVVASTLTVKHIYDIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVVKELD

XP_022977323.1 54S ribosomal protein L19, mitochondrial-like [Cucurbita maxima]1.4e-8098.71Show/hide
Query:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR
        MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGS R
Subjt:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR

Query:  PGHVVASTLTVKHIYDIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVVKELD
        PGHVVASTLT+KHIYDIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVVKELD
Subjt:  PGHVVASTLTVKHIYDIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVVKELD

XP_038901904.1 54S ribosomal protein L19, mitochondrial [Benincasa hispida]5.5e-8098.06Show/hide
Query:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR
        MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR
Subjt:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR

Query:  PGHVVASTLTVKHIYDIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVVKELD
        PGHVVASTL+VKHIY+IAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVVKEL+
Subjt:  PGHVVASTLTVKHIYDIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVVKELD

TrEMBL top hitse value%identityAlignment
A0A1S3BMZ5 54S ribosomal protein L19, mitochondrial5.0e-7996.13Show/hide
Query:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR
        MATLKEILTRRPV+ATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR
Subjt:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR

Query:  PGHVVASTLTVKHIYDIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVVKELD
        PGHVVASTL+VKHIY+IAKVKQSDPYCQYMPLESICKSIIGTANSMGIKV+ EL+
Subjt:  PGHVVASTLTVKHIYDIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVVKELD

A0A5A7T9U7 54S ribosomal protein L195.0e-7996.13Show/hide
Query:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR
        MATLKEILTRRPV+ATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR
Subjt:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR

Query:  PGHVVASTLTVKHIYDIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVVKELD
        PGHVVASTL+VKHIY+IAKVKQSDPYCQYMPLESICKSIIGTANSMGIKV+ EL+
Subjt:  PGHVVASTLTVKHIYDIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVVKELD

A0A6J1BU21 54S ribosomal protein L19, mitochondrial1.0e-7996.77Show/hide
Query:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR
        MATLKEILTRRPV+ATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGI+SGSSR
Subjt:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR

Query:  PGHVVASTLTVKHIYDIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVVKELD
        PGHVVASTL++KHIY+IAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVVKELD
Subjt:  PGHVVASTLTVKHIYDIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVVKELD

A0A6J1GG89 54S ribosomal protein L19, mitochondrial-like9.1e-8198.71Show/hide
Query:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR
        MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGS R
Subjt:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR

Query:  PGHVVASTLTVKHIYDIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVVKELD
        PGHVVASTLTVKHIYDIAKVKQSDP+CQYMPLESICKSIIGTANSMGIKVVKELD
Subjt:  PGHVVASTLTVKHIYDIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVVKELD

A0A6J1IPM9 54S ribosomal protein L19, mitochondrial-like7.0e-8198.71Show/hide
Query:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR
        MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGS R
Subjt:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR

Query:  PGHVVASTLTVKHIYDIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVVKELD
        PGHVVASTLT+KHIYDIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVVKELD
Subjt:  PGHVVASTLTVKHIYDIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVVKELD

SwissProt top hitse value%identityAlignment
A7HWQ0 50S ribosomal protein L111.2e-2947.18Show/hide
Query:  RPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLT
        + +   I+L VPAG A P+PP+GPALGQ  LN+M FCK FNA TQK +   P+ V ITAF D +F F +K+P  +++LKKAA + SGS  PG   A T+T
Subjt:  RPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLT

Query:  VKHIYDIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVVK
        V    +IA+ K +D       L+   K I G+A SMG++VV+
Subjt:  VKHIYDIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVVK

O67758 50S ribosomal protein L111.6e-2947.14Show/hide
Query:  RPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLT
        + V ATI L +PA  A PAPPVGPALGQ+ +N+M F K FNA ++ Y+P T + V IT ++D +F F +K+P V++ LKKAAG+E GSS P  V    +T
Subjt:  RPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLT

Query:  VKHIYDIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKV
        VK + +IAK+K  D       L++  +++ GTA SMGI++
Subjt:  VKHIYDIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKV

Q2RQU9 50S ribosomal protein L114.1e-3046.48Show/hide
Query:  RPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLT
        + +   I+L VPAG A P+PP+GPALGQ  LN+M FCK FNA TQ  +P  P+ V ITA+ D TF +  K+P +T++LKKAAGI  GS+ PG   A T+T
Subjt:  RPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLT

Query:  VKHIYDIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVVK
        ++ + DIA+ K  D       +E+  + ++G+A SMG++VV+
Subjt:  VKHIYDIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVVK

Q9UTK2 54S ribosomal protein L19, mitochondrial6.1e-3451.11Show/hide
Query:  IRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLTVKHIYD
        I+L VPAG A P PP+GPALG   L  + FCK+FNART  + P+TP+   IT     TF FT+ +P  +W + K   +E GSS P H +   L++KHIY+
Subjt:  IRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLTVKHIYD

Query:  IAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVV
        IAK+K +DP  Q + L S+CKS+IGTA SMG+KVV
Subjt:  IAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVV

Q9VFJ2 39S ribosomal protein L11, mitochondrial9.2e-3038.71Show/hide
Query:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR
        + +LK+ + R    + ++  +PAG A   PP+GP LGQ  +N+ AFCKDFNA+T + K   P+   I+   D +++  +  P  T++LK+AAGI+ G+  
Subjt:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR

Query:  PGHVVASTLTVKHIYDIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVVKELD
        PG  VA  +T+KH+Y+IA +K  DP    + ++ +C+ +I  A + GIKVV+E+D
Subjt:  PGHVVASTLTVKHIYDIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVVKELD

Arabidopsis top hitse value%identityAlignment
AT1G32990.1 plastid ribosomal protein l113.8e-2343.57Show/hide
Query:  RPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLT
        + V   I+L + AG A PAPPVGPALG   +N+MAFCKD+NART   K    + V IT F D +F F +K+P  +  L KAAG+E GS  P       +T
Subjt:  RPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLT

Query:  VKHIYDIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKV
        +  +  IA  K  D  C    +ES  + I GTA +MGI +
Subjt:  VKHIYDIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKV

AT4G35490.1 mitochondrial ribosomal protein L111.8e-7383.77Show/hide
Query:  ATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRP
        A  KEIL RRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDN+FEFTVKSP+V+WY+KKAAG++ GS+RP
Subjt:  ATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRP

Query:  GHVVASTLTVKHIYDIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVVKELD
        GH+  +TL+V+H+Y+IAKVKQ+DP+CQYMPLESICKSIIGTANSMGIK+V++L+
Subjt:  GHVVASTLTVKHIYDIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVVKELD

AT5G51610.1 Ribosomal protein L11 family protein1.7e-0734.18Show/hide
Query:  DNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLTVKHIYDIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKV
        D +F F +K+P  ++ L KAAG++ GS  P  +    +T+  +  IA+VK  +  C    + S  ++I GTA +MGI +
Subjt:  DNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLTVKHIYDIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCACCTTGAAAGAGATCTTAACAAGACGACCCGTCGCCGCCACCATCAGGCTCACCGTACCTGCCGGCGGAGCTCGCCCTGCGCCACCGGTGGGTCCGGCGTTGGG
TCAGTACCGGCTGAATCTGATGGCTTTCTGCAAGGATTTCAATGCCCGGACTCAAAAGTACAAGCCTGACACACCCATGGCCGTCACCATTACGGCTTTCAAGGATAATA
CCTTTGAGTTCACCGTAAAGTCGCCGTCGGTCACATGGTACCTGAAGAAAGCCGCCGGGATCGAGTCTGGGAGCAGCCGCCCTGGCCATGTGGTCGCCTCTACGCTCACT
GTCAAGCACATTTACGATATCGCCAAAGTCAAGCAGTCCGATCCTTATTGCCAGTACATGCCACTAGAGTCCATTTGTAAGTCCATTATCGGCACTGCCAATAGCATGGG
AATTAAGGTTGTTAAGGAATTGGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCACCTTGAAAGAGATCTTAACAAGACGACCCGTCGCCGCCACCATCAGGCTCACCGTACCTGCCGGCGGAGCTCGCCCTGCGCCACCGGTGGGTCCGGCGTTGGG
TCAGTACCGGCTGAATCTGATGGCTTTCTGCAAGGATTTCAATGCCCGGACTCAAAAGTACAAGCCTGACACACCCATGGCCGTCACCATTACGGCTTTCAAGGATAATA
CCTTTGAGTTCACCGTAAAGTCGCCGTCGGTCACATGGTACCTGAAGAAAGCCGCCGGGATCGAGTCTGGGAGCAGCCGCCCTGGCCATGTGGTCGCCTCTACGCTCACT
GTCAAGCACATTTACGATATCGCCAAAGTCAAGCAGTCCGATCCTTATTGCCAGTACATGCCACTAGAGTCCATTTGTAAGTCCATTATCGGCACTGCCAATAGCATGGG
AATTAAGGTTGTTAAGGAATTGGATTAA
Protein sequenceShow/hide protein sequence
MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLT
VKHIYDIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVVKELD