; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg00538 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg00538
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionheterogeneous nuclear ribonucleoprotein H2 isoform X1
Genome locationCarg_Chr03:5509421..5510191
RNA-Seq ExpressionCarg00538
SyntenyCarg00538
Gene Ontology termsGO:1990904 - ribonucleoprotein complex (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7034040.1 Heterogeneous nuclear ribonucleoprotein F, partial [Cucurbita argyrosperma subsp. argyrosperma]2.2e-142100Show/hide
Query:  MLGSGGVSNGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSL
        MLGSGGVSNGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSL
Subjt:  MLGSGGVSNGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSL

Query:  QVEFALQRDRQNMGRRYVEVFSCKRQDYYNAVAAEVNYEGIYDNDYNGSPPPRQKRISDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLAEERIHIA
        QVEFALQRDRQNMGRRYVEVFSCKRQDYYNAVAAEVNYEGIYDNDYNGSPPPRQKRISDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLAEERIHIA
Subjt:  QVEFALQRDRQNMGRRYVEVFSCKRQDYYNAVAAEVNYEGIYDNDYNGSPPPRQKRISDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLAEERIHIA

Query:  SRPDGKATGEAYVEFASAEDAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
        SRPDGKATGEAYVEFASAEDAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
Subjt:  SRPDGKATGEAYVEFASAEDAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ

XP_022950263.1 heterogeneous nuclear ribonucleoprotein H-like isoform X1 [Cucurbita moschata]7.0e-14199.22Show/hide
Query:  MLGSGGVSNGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSL
        MLGSGGVS+GYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSL
Subjt:  MLGSGGVSNGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSL

Query:  QVEFALQRDRQNMGRRYVEVFSCKRQDYYNAVAAEVNYEGIYDNDYNGSPPPRQKRISDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLAEERIHIA
        QVEFALQRDRQNMGRRYVEVFSCKRQDYYNAVAAEVNYEGIYDNDYNGSPPPRQKRISDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLAEERIHIA
Subjt:  QVEFALQRDRQNMGRRYVEVFSCKRQDYYNAVAAEVNYEGIYDNDYNGSPPPRQKRISDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLAEERIHIA

Query:  SRPDGKATGEAYVEFASAEDAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
        SR DGKATGEAYVEFASAEDAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
Subjt:  SRPDGKATGEAYVEFASAEDAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ

XP_022950265.1 heterogeneous nuclear ribonucleoprotein H-like isoform X2 [Cucurbita moschata]7.0e-14199.22Show/hide
Query:  MLGSGGVSNGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSL
        MLGSGGVS+GYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSL
Subjt:  MLGSGGVSNGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSL

Query:  QVEFALQRDRQNMGRRYVEVFSCKRQDYYNAVAAEVNYEGIYDNDYNGSPPPRQKRISDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLAEERIHIA
        QVEFALQRDRQNMGRRYVEVFSCKRQDYYNAVAAEVNYEGIYDNDYNGSPPPRQKRISDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLAEERIHIA
Subjt:  QVEFALQRDRQNMGRRYVEVFSCKRQDYYNAVAAEVNYEGIYDNDYNGSPPPRQKRISDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLAEERIHIA

Query:  SRPDGKATGEAYVEFASAEDAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
        SR DGKATGEAYVEFASAEDAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
Subjt:  SRPDGKATGEAYVEFASAEDAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ

XP_023544122.1 heterogeneous nuclear ribonucleoprotein H-like isoform X1 [Cucurbita pepo subsp. pepo]2.4e-14199.22Show/hide
Query:  MLGSGGVSNGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSL
        MLGSGGVS+GYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSL
Subjt:  MLGSGGVSNGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSL

Query:  QVEFALQRDRQNMGRRYVEVFSCKRQDYYNAVAAEVNYEGIYDNDYNGSPPPRQKRISDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLAEERIHIA
        QVEFALQRDRQNMGRRYVEVFSCKRQDYYNAVAAEVNYEGIYDNDYNGSPPPRQKRISDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLAEERIHIA
Subjt:  QVEFALQRDRQNMGRRYVEVFSCKRQDYYNAVAAEVNYEGIYDNDYNGSPPPRQKRISDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLAEERIHIA

Query:  SRPDGKATGEAYVEFASAEDAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
        SRPDGKATGEAYVEFAS EDAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
Subjt:  SRPDGKATGEAYVEFASAEDAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ

XP_023544124.1 heterogeneous nuclear ribonucleoprotein H-like isoform X2 [Cucurbita pepo subsp. pepo]2.4e-14199.22Show/hide
Query:  MLGSGGVSNGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSL
        MLGSGGVS+GYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSL
Subjt:  MLGSGGVSNGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSL

Query:  QVEFALQRDRQNMGRRYVEVFSCKRQDYYNAVAAEVNYEGIYDNDYNGSPPPRQKRISDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLAEERIHIA
        QVEFALQRDRQNMGRRYVEVFSCKRQDYYNAVAAEVNYEGIYDNDYNGSPPPRQKRISDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLAEERIHIA
Subjt:  QVEFALQRDRQNMGRRYVEVFSCKRQDYYNAVAAEVNYEGIYDNDYNGSPPPRQKRISDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLAEERIHIA

Query:  SRPDGKATGEAYVEFASAEDAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
        SRPDGKATGEAYVEFAS EDAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
Subjt:  SRPDGKATGEAYVEFASAEDAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ

TrEMBL top hitse value%identityAlignment
A0A0A0KJN7 RRM domain-containing protein2.4e-13997.27Show/hide
Query:  MLGSGGVSNGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSL
        MLGSGGVS+GYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGS+
Subjt:  MLGSGGVSNGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSL

Query:  QVEFALQRDRQNMGRRYVEVFSCKRQDYYNAVAAEVNYEGIYDNDYNGSPPPRQKRISDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLAEERIHIA
        QVEFALQRDRQNMGRRYVEVF CKRQDYYNAVAAEVNYEGIYDNDY+GSPPPRQKR SDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLAE+RIHIA
Subjt:  QVEFALQRDRQNMGRRYVEVFSCKRQDYYNAVAAEVNYEGIYDNDYNGSPPPRQKRISDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLAEERIHIA

Query:  SRPDGKATGEAYVEFASAEDAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
        SRPDGKATGEAYVEFASAE+AKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
Subjt:  SRPDGKATGEAYVEFASAEDAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ

A0A6J1GEF2 heterogeneous nuclear ribonucleoprotein H-like isoform X13.4e-14199.22Show/hide
Query:  MLGSGGVSNGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSL
        MLGSGGVS+GYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSL
Subjt:  MLGSGGVSNGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSL

Query:  QVEFALQRDRQNMGRRYVEVFSCKRQDYYNAVAAEVNYEGIYDNDYNGSPPPRQKRISDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLAEERIHIA
        QVEFALQRDRQNMGRRYVEVFSCKRQDYYNAVAAEVNYEGIYDNDYNGSPPPRQKRISDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLAEERIHIA
Subjt:  QVEFALQRDRQNMGRRYVEVFSCKRQDYYNAVAAEVNYEGIYDNDYNGSPPPRQKRISDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLAEERIHIA

Query:  SRPDGKATGEAYVEFASAEDAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
        SR DGKATGEAYVEFASAEDAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
Subjt:  SRPDGKATGEAYVEFASAEDAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ

A0A6J1GF84 heterogeneous nuclear ribonucleoprotein H-like isoform X23.4e-14199.22Show/hide
Query:  MLGSGGVSNGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSL
        MLGSGGVS+GYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSL
Subjt:  MLGSGGVSNGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSL

Query:  QVEFALQRDRQNMGRRYVEVFSCKRQDYYNAVAAEVNYEGIYDNDYNGSPPPRQKRISDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLAEERIHIA
        QVEFALQRDRQNMGRRYVEVFSCKRQDYYNAVAAEVNYEGIYDNDYNGSPPPRQKRISDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLAEERIHIA
Subjt:  QVEFALQRDRQNMGRRYVEVFSCKRQDYYNAVAAEVNYEGIYDNDYNGSPPPRQKRISDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLAEERIHIA

Query:  SRPDGKATGEAYVEFASAEDAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
        SR DGKATGEAYVEFASAEDAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
Subjt:  SRPDGKATGEAYVEFASAEDAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ

A0A6J1IJJ3 heterogeneous nuclear ribonucleoprotein H-like isoform X11.3e-14098.44Show/hide
Query:  MLGSGGVSNGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSL
        MLGSGGVS+GY+VGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSL
Subjt:  MLGSGGVSNGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSL

Query:  QVEFALQRDRQNMGRRYVEVFSCKRQDYYNAVAAEVNYEGIYDNDYNGSPPPRQKRISDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLAEERIHIA
        QVEFALQRDRQNMGRRYVEVFSCKRQDYYNAVAAEVNYEGIY+NDYNGSPPPRQKRISDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLAEERIHIA
Subjt:  QVEFALQRDRQNMGRRYVEVFSCKRQDYYNAVAAEVNYEGIYDNDYNGSPPPRQKRISDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLAEERIHIA

Query:  SRPDGKATGEAYVEFASAEDAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
        SRPDGKATGEAYVEFASAE+AKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
Subjt:  SRPDGKATGEAYVEFASAEDAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ

A0A6J1IR18 heterogeneous nuclear ribonucleoprotein H-like isoform X21.3e-14098.44Show/hide
Query:  MLGSGGVSNGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSL
        MLGSGGVS+GY+VGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSL
Subjt:  MLGSGGVSNGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSL

Query:  QVEFALQRDRQNMGRRYVEVFSCKRQDYYNAVAAEVNYEGIYDNDYNGSPPPRQKRISDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLAEERIHIA
        QVEFALQRDRQNMGRRYVEVFSCKRQDYYNAVAAEVNYEGIY+NDYNGSPPPRQKRISDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLAEERIHIA
Subjt:  QVEFALQRDRQNMGRRYVEVFSCKRQDYYNAVAAEVNYEGIYDNDYNGSPPPRQKRISDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLAEERIHIA

Query:  SRPDGKATGEAYVEFASAEDAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
        SRPDGKATGEAYVEFASAE+AKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
Subjt:  SRPDGKATGEAYVEFASAEDAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ

SwissProt top hitse value%identityAlignment
B2RYD2 Epithelial splicing regulatory protein 14.6e-2635.58Show/hide
Query:  VVRLRGLPFNCTDIDIFKFFAGLDIVD---VLLVNKNGRFMGEAFVVFAGSLQVEFALQRDRQNMGRRYVEVFSCKRQDYYNAVAAEVNYEGIYDNDYNG
        VVR RGLP+  +D DI +FF GL+I      L +N  GR  GEA V F      + ALQR + +MG RY+EV+    +D+        N    +      
Subjt:  VVRLRGLPFNCTDIDIFKFFAGLDIVD---VLLVNKNGRFMGEAFVVFAGSLQVEFALQRDRQNMGRRYVEVFSCKRQDYYNAVAAEVNYEGIYDNDYNG

Query:  SPPPRQKRISDKDQMEYTEILKLRGLPFSVTKSNIIEFFGE---FDLAEERIHIASRPDGKATGEAYVEFASAEDAKRAMSKDKMTIGSRYVELFPSTPN
                +S ++Q+    I+++RGLPF+ T   ++ FFG+       +E I   + PDG+ TG+A+V FA  E A+ A+ K K  +G RY+ELF ST  
Subjt:  SPPPRQKRISDKDQMEYTEILKLRGLPFSVTKSNIIEFFGE---FDLAEERIHIASRPDGKATGEAYVEFASAEDAKRAMSKDKMTIGSRYVELFPSTPN

Query:  EARRAESR
        E ++  +R
Subjt:  EARRAESR

P52597 Heterogeneous nuclear ribonucleoprotein F7.8e-2636.14Show/hide
Query:  VVRLRGLPFNCTDIDIFKFFAGLDIVD-----VLLVNKNGRFMGEAFVVFAGSLQVEFALQRDRQNMGRRYVEVFSCKRQDYYNAVAAEVNYEGIYDNDY
        VV+LRGLP++C+  D+  F +   I D       +  + GR  GEAFV       V+ AL++DR++MG RY+EVF   R +               D   
Subjt:  VVRLRGLPFNCTDIDIFKFFAGLDIVD-----VLLVNKNGRFMGEAFVVFAGSLQVEFALQRDRQNMGRRYVEVFSCKRQDYYNAVAAEVNYEGIYDNDY

Query:  NGSPPPRQKRISDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLAEERIHIASRPDGKATGEAYVEFASAEDAKRAMSKDKMTIGSRYVELFPSTPNE
          S P      +D         ++LRGLPF  TK  I++FF   ++    I +   P+GK TGEA+V+FAS E A++A+ K K  IG RY+E+F S+  E
Subjt:  NGSPPPRQKRISDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLAEERIHIASRPDGKATGEAYVEFASAEDAKRAMSKDKMTIGSRYVELFPSTPNE

Query:  AR
         R
Subjt:  AR

Q3US41 Epithelial splicing regulatory protein 13.5e-2635.58Show/hide
Query:  VVRLRGLPFNCTDIDIFKFFAGLDIVD---VLLVNKNGRFMGEAFVVFAGSLQVEFALQRDRQNMGRRYVEVFSCKRQDYYNAVAAEVNYEGIYDNDYNG
        VVR RGLP+  +D DI +FF GL+I      L +N  GR  GEA V F      + ALQR + +MG RY+EV+    +D+        N    +      
Subjt:  VVRLRGLPFNCTDIDIFKFFAGLDIVD---VLLVNKNGRFMGEAFVVFAGSLQVEFALQRDRQNMGRRYVEVFSCKRQDYYNAVAAEVNYEGIYDNDYNG

Query:  SPPPRQKRISDKDQMEYTEILKLRGLPFSVTKSNIIEFFGE---FDLAEERIHIASRPDGKATGEAYVEFASAEDAKRAMSKDKMTIGSRYVELFPSTPN
                +S ++Q+    I+++RGLPF+ T   ++ FFG+       +E I   + PDG+ TG+A+V FA  E A+ A+ K K  +G RY+ELF ST  
Subjt:  SPPPRQKRISDKDQMEYTEILKLRGLPFSVTKSNIIEFFGE---FDLAEERIHIASRPDGKATGEAYVEFASAEDAKRAMSKDKMTIGSRYVELFPSTPN

Query:  EARRAESR
        E ++  +R
Subjt:  EARRAESR

Q5E9J1 Heterogeneous nuclear ribonucleoprotein F6.0e-2636.63Show/hide
Query:  VVRLRGLPFNCTDIDIFKFFAGLDIVDVL-----LVNKNGRFMGEAFVVFAGSLQVEFALQRDRQNMGRRYVEVFSCKRQDYYNAVAAEVNYEGIYDNDY
        VV+LRGLP++C+  D+  F +   I D +     +  + GR  GEAFV       V+ AL++DR++MG RY+EVF   R +               D   
Subjt:  VVRLRGLPFNCTDIDIFKFFAGLDIVDVL-----LVNKNGRFMGEAFVVFAGSLQVEFALQRDRQNMGRRYVEVFSCKRQDYYNAVAAEVNYEGIYDNDY

Query:  NGSPPPRQKRISDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLAEERIHIASRPDGKATGEAYVEFASAEDAKRAMSKDKMTIGSRYVELFPSTPNE
          S P      +D         ++LRGLPF  TK  II+FF   ++    I +   P+GK TGEA+V+FAS E A++A+ K K  IG RY+E+F S+  E
Subjt:  NGSPPPRQKRISDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLAEERIHIASRPDGKATGEAYVEFASAEDAKRAMSKDKMTIGSRYVELFPSTPNE

Query:  AR
         R
Subjt:  AR

Q6NXG1 Epithelial splicing regulatory protein 14.6e-2635.58Show/hide
Query:  VVRLRGLPFNCTDIDIFKFFAGLDIVD---VLLVNKNGRFMGEAFVVFAGSLQVEFALQRDRQNMGRRYVEVFSCKRQDYYNAVAAEVNYEGIYDNDYNG
        VVR RGLP+  +D DI +FF GL+I      L +N  GR  GEA V F      + ALQR + +MG RY+EV+    +D+        N    +      
Subjt:  VVRLRGLPFNCTDIDIFKFFAGLDIVD---VLLVNKNGRFMGEAFVVFAGSLQVEFALQRDRQNMGRRYVEVFSCKRQDYYNAVAAEVNYEGIYDNDYNG

Query:  SPPPRQKRISDKDQMEYTEILKLRGLPFSVTKSNIIEFFGE---FDLAEERIHIASRPDGKATGEAYVEFASAEDAKRAMSKDKMTIGSRYVELFPSTPN
                +S ++Q+    I+++RGLPF+ T   ++ FFG+       +E I   + PDG+ TG+A+V FA  E A+ A+ K K  +G RY+ELF ST  
Subjt:  SPPPRQKRISDKDQMEYTEILKLRGLPFSVTKSNIIEFFGE---FDLAEERIHIASRPDGKATGEAYVEFASAEDAKRAMSKDKMTIGSRYVELFPSTPN

Query:  EARRAESR
        E ++  +R
Subjt:  EARRAESR

Arabidopsis top hitse value%identityAlignment
AT3G20890.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.2e-6145.14Show/hide
Query:  GSGGVSNGYEVGSKRQRMME---PNPYFAV-SSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAG
        G G   +G E+G KRQRM++   P P++    SS   + PYG+ + PP   FP VRLRGLPF+C ++D+ +FF GLD+VDVL V++N +  GEAF V   
Subjt:  GSGGVSNGYEVGSKRQRMME---PNPYFAV-SSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAG

Query:  SLQVEFALQRDRQNMGRRYVEVFSCKRQDYYNAVAAEVNYEGIY--------------------------DNDYNGSPPPR---QKRISD--KDQMEYTE
         LQV+FALQ++RQNMGRRYVEVF   +Q+YY A+A EV    ++                               GS P R   + R SD  K+ +E+T 
Subjt:  SLQVEFALQRDRQNMGRRYVEVFSCKRQDYYNAVAAEVNYEGIY--------------------------DNDYNGSPPPR---QKRISD--KDQMEYTE

Query:  ILKLRGLPFSVTKSNIIEFFGEFDLAEERIHIASRPDGKATGEAYVEFASAEDAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSR
        IL+LRGLPFS  K +I++FF +F+L+E+ +H+    +G+ TGEA+VEF +AED++ AM KD+ T+GSRY+ELFPS+  E   A SR R
Subjt:  ILKLRGLPFSVTKSNIIEFFGEFDLAEERIHIASRPDGKATGEAYVEFASAEDAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSR

AT4G36960.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.1e-0632.94Show/hide
Query:  LKLRGLPFSVTKSNIIEFFGEFDLAEERIHIASRPDGKATGEAYVEFASAEDAKRAMSKDKMTIGSRYVELFPSTPNEARRAESR
        L + G+P+ +    + ++  +F   E+ I +  R  G++ G  YV FASAEDAK A+ K +  +G+R +E+  +TP E  R  ++
Subjt:  LKLRGLPFSVTKSNIIEFFGEFDLAEERIHIASRPDGKATGEAYVEFASAEDAKRAMSKDKMTIGSRYVELFPSTPNEARRAESR

AT4G36960.2 RNA-binding (RRM/RBD/RNP motifs) family protein1.1e-0632.94Show/hide
Query:  LKLRGLPFSVTKSNIIEFFGEFDLAEERIHIASRPDGKATGEAYVEFASAEDAKRAMSKDKMTIGSRYVELFPSTPNEARRAESR
        L + G+P+ +    + ++  +F   E+ I +  R  G++ G  YV FASAEDAK A+ K +  +G+R +E+  +TP E  R  ++
Subjt:  LKLRGLPFSVTKSNIIEFFGEFDLAEERIHIASRPDGKATGEAYVEFASAEDAKRAMSKDKMTIGSRYVELFPSTPNEARRAESR

AT5G66010.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.0e-9365.78Show/hide
Query:  MLGSGGV---SNGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFA
        M GS G    S GYEVGSKRQRMM+ NPY AV +    F P+GY        FPVVRLRGLPFNC DIDIF+FFAGL+IVDVLLV+KNG+F GEAFVVFA
Subjt:  MLGSGGV---SNGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFA

Query:  GSLQVEFALQRDRQNMGRRYVEVFSCKRQDYYNAVAAEVNYEGIYDNDYNGSPPP----RQKRISDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLA
        G +QVE ALQRDR NMGRRYVEVF C +QDYYNAVAAE   EG Y+ +   SPPP    R KR S+K+++EYTE+LK+RGLP+SV K  IIEFF  + + 
Subjt:  GSLQVEFALQRDRQNMGRRYVEVFSCKRQDYYNAVAAEVNYEGIYDNDYNGSPPP----RQKRISDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLA

Query:  EERIHIASRPDGKATGEAYVEFASAEDAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
        + R+ +  RPDGKATGEA+VEF + E+A+RAM+KDKM+IGSRYVELFP+T  EARRAE+RSRQ
Subjt:  EERIHIASRPDGKATGEAYVEFASAEDAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ

AT5G66010.2 RNA-binding (RRM/RBD/RNP motifs) family protein4.1e-5464.6Show/hide
Query:  LQVEFALQRDRQNMGRRYVEVFSCKRQDYYNAVAAEVNYEGIYDNDYNGSPPP----RQKRISDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLAEE
        +QVE ALQRDR NMGRRYVEVF C +QDYYNAVAAE   EG Y+ +   SPPP    R KR S+K+++EYTE+LK+RGLP+SV K  IIEFF  + + + 
Subjt:  LQVEFALQRDRQNMGRRYVEVFSCKRQDYYNAVAAEVNYEGIYDNDYNGSPPP----RQKRISDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLAEE

Query:  RIHIASRPDGKATGEAYVEFASAEDAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ
        R+ +  RPDGKATGEA+VEF + E+A+RAM+KDKM+IGSRYVELFP+T  EARRAE+RSRQ
Subjt:  RIHIASRPDGKATGEAYVEFASAEDAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGGGAGCGGGGGGGTTTCGAATGGGTACGAAGTCGGCTCAAAAAGACAAAGAATGATGGAACCGAATCCCTACTTCGCAGTTAGCAGCAGCACTGCTGGATTTCA
ACCTTATGGCTATGGGAGTTTTCCACCTACTCATGCCTTTCCCGTGGTTCGCCTTAGAGGACTTCCCTTCAACTGCACTGACATTGATATTTTCAAGTTCTTTGCTGGAC
TAGACATTGTGGATGTGCTGCTTGTCAACAAGAATGGGCGATTCATGGGAGAAGCCTTTGTTGTCTTTGCTGGATCTTTGCAGGTTGAGTTCGCGTTGCAACGGGATCGA
CAGAATATGGGGCGTAGATATGTAGAAGTCTTTAGCTGCAAAAGGCAGGATTATTATAATGCTGTTGCTGCTGAAGTAAATTATGAGGGCATTTATGATAATGACTACAA
TGGAAGTCCTCCTCCTCGACAAAAGAGGATCAGCGACAAGGACCAGATGGAATACACCGAGATACTGAAGCTGCGTGGTCTCCCCTTCTCTGTGACAAAATCCAACATCA
TTGAATTTTTCGGAGAGTTCGACCTTGCAGAAGAAAGGATACATATTGCAAGCCGTCCAGATGGGAAGGCTACTGGGGAGGCTTATGTGGAGTTCGCTTCAGCAGAGGAT
GCAAAGAGAGCAATGAGCAAGGACAAGATGACAATTGGATCGAGGTACGTGGAGTTGTTTCCTTCAACCCCAAATGAAGCTAGGAGAGCTGAGTCAAGGTCAAGACAGTG
A
mRNA sequenceShow/hide mRNA sequence
ATGTTGGGGAGCGGGGGGGTTTCGAATGGGTACGAAGTCGGCTCAAAAAGACAAAGAATGATGGAACCGAATCCCTACTTCGCAGTTAGCAGCAGCACTGCTGGATTTCA
ACCTTATGGCTATGGGAGTTTTCCACCTACTCATGCCTTTCCCGTGGTTCGCCTTAGAGGACTTCCCTTCAACTGCACTGACATTGATATTTTCAAGTTCTTTGCTGGAC
TAGACATTGTGGATGTGCTGCTTGTCAACAAGAATGGGCGATTCATGGGAGAAGCCTTTGTTGTCTTTGCTGGATCTTTGCAGGTTGAGTTCGCGTTGCAACGGGATCGA
CAGAATATGGGGCGTAGATATGTAGAAGTCTTTAGCTGCAAAAGGCAGGATTATTATAATGCTGTTGCTGCTGAAGTAAATTATGAGGGCATTTATGATAATGACTACAA
TGGAAGTCCTCCTCCTCGACAAAAGAGGATCAGCGACAAGGACCAGATGGAATACACCGAGATACTGAAGCTGCGTGGTCTCCCCTTCTCTGTGACAAAATCCAACATCA
TTGAATTTTTCGGAGAGTTCGACCTTGCAGAAGAAAGGATACATATTGCAAGCCGTCCAGATGGGAAGGCTACTGGGGAGGCTTATGTGGAGTTCGCTTCAGCAGAGGAT
GCAAAGAGAGCAATGAGCAAGGACAAGATGACAATTGGATCGAGGTACGTGGAGTTGTTTCCTTCAACCCCAAATGAAGCTAGGAGAGCTGAGTCAAGGTCAAGACAGTG
A
Protein sequenceShow/hide protein sequence
MLGSGGVSNGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSLQVEFALQRDR
QNMGRRYVEVFSCKRQDYYNAVAAEVNYEGIYDNDYNGSPPPRQKRISDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLAEERIHIASRPDGKATGEAYVEFASAED
AKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRQ