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Carg00546 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg00546
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr03:5552899..5557677
RNA-Seq ExpressionCarg00546
SyntenyCarg00546
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7034048.1 hypothetical protein SDJN02_03774 [Cucurbita argyrosperma subsp. argyrosperma]2.5e-67100Show/hide
Query:  MQRCCSRRPNLRICFAGSPIGAVECFLLSPKQRLSYCRRYPGILQSHPPIPAPNFPVGVRLGLVGPVGGSEPRLCICRAPPGRRERCNSLQCLRRKKNPR
        MQRCCSRRPNLRICFAGSPIGAVECFLLSPKQRLSYCRRYPGILQSHPPIPAPNFPVGVRLGLVGPVGGSEPRLCICRAPPGRRERCNSLQCLRRKKNPR
Subjt:  MQRCCSRRPNLRICFAGSPIGAVECFLLSPKQRLSYCRRYPGILQSHPPIPAPNFPVGVRLGLVGPVGGSEPRLCICRAPPGRRERCNSLQCLRRKKNPR

Query:  IEAWLALARPESWMDAIEQMVIE
        IEAWLALARPESWMDAIEQMVIE
Subjt:  IEAWLALARPESWMDAIEQMVIE
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGCGATGCTGTTCTCGACGCCCGAATCTTCGTATTTGCTTCGCCGGATCGCCGATTGGAGCTGTCGAATGCTTTCTTTTATCACCAAAACAGCGTCTCTCGTATTG
TCGCAGATATCCAGGAATCTTACAGAGCCATCCACCAATTCCTGCACCCAATTTTCCCGTCGGTGTGAGGCTAGGGCTTGTTGGACCAGTGGGAGGTTCAGAACCTCGTT
TATGCATCTGTAGAGCTCCACCAGGCCGGAGAGAGCGCTGCAATTCGCTTCAATGCTTGAGAAGGAAGAAGAATCCAAGGATCGAAGCTTGGCTAGCTCTTGCTCGACCC
GAATCGTGGATGGATGCGATCGAGCAGATGGTGATTGAATAA
mRNA sequenceShow/hide mRNA sequence
GGAACTCCAAAGATTCAATGCAGTTCTTCTATTTGATTTGGATTTCAGCTCACAGATCAATTACAGAGAAAGTGTTCTTGAAGATAGAAGAAGGATTTATACAGACTGAA
AAGCACTTTTTTGGTTCAAAATCACAGCCAACATATTATCAAATTCAAGGATAGAGTTCAGTGCGCGAATGTACAGAGCCGATTTTCATCGCCGGATTTCATGAGGGGGG
GAAATCACAATGCGACCAATTTTACTGAGTAATTATATTCAGAAGAGAAACTCTGGTATGAATCAATTCCCTGAACAATCCTTCTGTTCCATGTTCGATTCTTTCAATGC
TCGAATCCAATCCCAACAGTCTCTCTCGAACAATCGATTGAATCTTCTCCTCCGCTTCTGCGTCTCTTCTCAACGATCCGAACTGCATCGCCTCGATCGCCATGTCCAGG
TTCTCCAACTCGTTGGCTCTCTCTGCCTGATTGTTGCGTGTGATTGCTCCCTTGTGCACGAGTCTAGACACCACTGACCATCGGCTAGGTTTCGGTCTCCAGTGCACCGG
CACGGCGAGGAGAGACAATAGAGAGTTGAAGATGGAGGAGGTGATGGAGCTTGCTTCTCTCAGCACTCTGATCACCGCCACCGTCACTTCGTTCTCTAATTGAAGAGGAG
GAGAGGCTCCGGAGGTGTAATCCATTTGTCTGAGCGATGCGAGCGATTTCTTCAAGCTTTCATGCTTGATCTTCTTTCTCAAGCTGATATATGCAGCGATGCTGTTCTCG
ACGCCCGAATCTTCGTATTTGCTTCGCCGGATCGCCGATTGGAGCTGTCGAATGCTTTCTTTTATCACCAAAACAGCGTCTCTCGTATTGTCGCAGATATCCAGGAATCT
TACAGAGCCATCCACCAATTCCTGCACCCAATTTTCCCGTCGGTGTGAGGCTAGGGCTTGTTGGACCAGTGGGAGGTTCAGAACCTCGTTTATGCATCTGTAGAGCTCCA
CCAGGCCGGAGAGAGCGCTGCAATTCGCTTCAATGCTTGAGAAGGAAGAAGAATCCAAGGATCGAAGCTTGGCTAGCTCTTGCTCGACCCGAATCGTGGATGGATGCGAT
CGAGCAGATGGTGATTGAATAAGAACACATAAAGGAAGTGATCGAACAAGCAAGAGATTTTATCATTATCAATGATTAAACTGTTATTCTTGTTTGGATCAAGAACACAT
AGAACACTATCGTATTATGGACATGGAATCGAGCTAACTATCCATATGGCGGATCCCTAAAAGTTGGATGCCTTTGCAGGATTCAGGGTGTCAAAAAATGGCTATGGAAA
TACAATACATCTCCTATTGAGATATTATGTTCAACAGAGAGGCTCTTGTTTTGATCAATCTCCTGAACACACCATCCAACCCACTCTCAATTTCTTGTGCCGCCATTTCC
AAACTCTCCAATCTTCTTTGAGCAATCTGCAACTTCTCAACCTCCATTCCTTCAACAACAGAGCTCAAAGCCACATCCACGTTCTCAAATTCGTTCATGGCACTGTTTGA
CTCGCAGGCAATCGCCCCCTTGTGCACCCACTTGGTAACCAAAGACCATCCTCGAGCTTTTGGCTTCGTCAATGGTGTTAAGTACAACAACACGGATTCGAAAATGGAGC
TGTTGGTTGAGCAAACTTGTCTCAGCGCTTCAACCACAGAGCTCAGGTGATTATCTGGATTTTGCATTGTGGATGAGTTGAATTTCTCATTCATCTTCTTCATTGACGTT
ATCAAGTTTTTACCTTCTTTCTTCATCTTTTTTCTATAGGAAATGTAAGCAGCAGTGGTGGTTTTCATGGCGGAATCGCCTTTCCTCCGGCGAAAGGCAGAGTGAAGAGC
CCCAACATGCTGTTGGGTTTCTAATGCTATGTCCTTCGCTAAGCTGCAGACATCCAAAAGCTTCATAGAATCATCCAACAACTCGTCCACCAACTGTTTGTTTTGGGGAC
AAGACAAAACCTGCTGGGTGGAACCCATTTTGAGAAGCTCATCAATGGAGTCATACAAATCCTGTAATCCCAAAAGAGCACCACAAACAGAAGCAGAAGAAGAAGAAGAA
GACACCCATGTCTTCACCTTCCTCAACTCCTCCTCAACCTTCACAGCACAGGGATGCAATCTAGAAGGCAAGCTTATGGACCTCGCTTGGTACTTGGCAGCCATTATTAA
CAACCTTCCTT
Protein sequenceShow/hide protein sequence
MQRCCSRRPNLRICFAGSPIGAVECFLLSPKQRLSYCRRYPGILQSHPPIPAPNFPVGVRLGLVGPVGGSEPRLCICRAPPGRRERCNSLQCLRRKKNPRIEAWLALARP
ESWMDAIEQMVIE