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Carg00557 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg00557
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr03:5586731..5587545
RNA-Seq ExpressionCarg00557
SyntenyCarg00557
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB8084139.1 hypothetical protein EE612_006629, partial [Oryza sativa]1.4e-1330.77Show/hide
Query:  ASDVIRPAANGAPPLNPVQPSQRNPAPNTMWSMLFGGKLCLSRECRGPTCGHG----------------------------------------HQIRNHH
        A D +   A GAPPLNP QPS  +P P  M  MLFG    LS    GPT G G                                           R+  
Subjt:  ASDVIRPAANGAPPLNPVQPSQRNPAPNTMWSMLFGGKLCLSRECRGPTCGHG----------------------------------------HQIRNHH

Query:  HYNLIPKHTEKKDHSKEKIIYPVSGSETSHPRRKMNDIAA----GVI-------------NEVPFRQRCTRHTNEPEQSVTECHTMCPQHPTDEHRSEAI
        H  L     E++   + +        E  H R ++  + A    G +             +E P RQR      E EQ V E H    QHP DE     +
Subjt:  HYNLIPKHTEKKDHSKEKIIYPVSGSETSHPRRKMNDIAA----GVI-------------NEVPFRQRCTRHTNEPEQSVTECHTMCPQHPTDEHRSEAI

Query:  ERHEGGVDSPFFLHHAAIEDDQPRNSLEADHGGCRELPCIVGLVVPV
        +RHEG VD P  LH AA++  QPR+ LE D    RELP +V  V P+
Subjt:  ERHEGGVDSPFFLHHAAIEDDQPRNSLEADHGGCRELPCIVGLVVPV

KAG7034059.1 hypothetical protein SDJN02_03785, partial [Cucurbita argyrosperma subsp. argyrosperma]5.2e-112100Show/hide
Query:  MASDVIRPAANGAPPLNPVQPSQRNPAPNTMWSMLFGGKLCLSRECRGPTCGHGHQIRNHHHYNLIPKHTEKKDHSKEKIIYPVSGSETSHPRRKMNDIA
        MASDVIRPAANGAPPLNPVQPSQRNPAPNTMWSMLFGGKLCLSRECRGPTCGHGHQIRNHHHYNLIPKHTEKKDHSKEKIIYPVSGSETSHPRRKMNDIA
Subjt:  MASDVIRPAANGAPPLNPVQPSQRNPAPNTMWSMLFGGKLCLSRECRGPTCGHGHQIRNHHHYNLIPKHTEKKDHSKEKIIYPVSGSETSHPRRKMNDIA

Query:  AGVINEVPFRQRCTRHTNEPEQSVTECHTMCPQHPTDEHRSEAIERHEGGVDSPFFLHHAAIEDDQPRNSLEADHGGCRELPCIVGLVVPVGN
        AGVINEVPFRQRCTRHTNEPEQSVTECHTMCPQHPTDEHRSEAIERHEGGVDSPFFLHHAAIEDDQPRNSLEADHGGCRELPCIVGLVVPVGN
Subjt:  AGVINEVPFRQRCTRHTNEPEQSVTECHTMCPQHPTDEHRSEAIERHEGGVDSPFFLHHAAIEDDQPRNSLEADHGGCRELPCIVGLVVPVGN

NP_001168343.1 uncharacterized protein LOC100382111 [Zea mays]5.1e-1142.39Show/hide
Query:  AGVINEVPFRQRCTRHTNEPEQSVTECHTMCPQHPTDEHRSEAIERHEGGVDSPFFLHHAAIEDDQPRNSLEADHGGCRELPCIVGLVVPVG
        AG+ ++    QR  R   + +Q V E H + P HP D HR E ++RHEG V  P  LHHAA++D Q R +L+      R+LP +V LV P+G
Subjt:  AGVINEVPFRQRCTRHTNEPEQSVTECHTMCPQHPTDEHRSEAIERHEGGVDSPFFLHHAAIEDDQPRNSLEADHGGCRELPCIVGLVVPVG

OQU90660.1 hypothetical protein SORBI_3001G020350 [Sorghum bicolor]3.0e-1145.05Show/hide
Query:  GVINEVPFRQRCTRHTNEPEQSVTECHTMCPQHPTDEHRSEAIERHEGGVDSPFFLHHAAIEDDQPRNSLEADHGGCRELPCIVGLVVPVG
        G+ +EV   QR  R   + ++ V E H + P HP D H  E +ERHEGGV  P  LHHAA+E  Q R +L+      R+LP +V LV PVG
Subjt:  GVINEVPFRQRCTRHTNEPEQSVTECHTMCPQHPTDEHRSEAIERHEGGVDSPFFLHHAAIEDDQPRNSLEADHGGCRELPCIVGLVVPVG

THU62832.1 hypothetical protein C4D60_Mb01t09290 [Musa balbisiana]1.8e-1151.43Show/hide
Query:  VTECHTMCPQHPTDEHRSEAIERHEGGVDSPFFLHHAAIEDDQPRNSLEADHGGCRELPCIVGLVVPVGN
        V + H + P  P D    E +ERHEGGVD P  LH  A+EDD+PR++L+AD  G   LPC+V LV PVG+
Subjt:  VTECHTMCPQHPTDEHRSEAIERHEGGVDSPFFLHHAAIEDDQPRNSLEADHGGCRELPCIVGLVVPVGN

TrEMBL top hitse value%identityAlignment
A0A0P0V9V5 Os01g0831250 protein (Fragment)7.0e-1430.77Show/hide
Query:  ASDVIRPAANGAPPLNPVQPSQRNPAPNTMWSMLFGGKLCLSRECRGPTCGHG----------------------------------------HQIRNHH
        A D +   A GAPPLNP QPS  +P P  M  MLFG    LS    GPT G G                                           R+  
Subjt:  ASDVIRPAANGAPPLNPVQPSQRNPAPNTMWSMLFGGKLCLSRECRGPTCGHG----------------------------------------HQIRNHH

Query:  HYNLIPKHTEKKDHSKEKIIYPVSGSETSHPRRKMNDIAA----GVI-------------NEVPFRQRCTRHTNEPEQSVTECHTMCPQHPTDEHRSEAI
        H  L     E++   + +        E  H R ++  + A    G +             +E P RQR      E EQ V E H    QHP DE     +
Subjt:  HYNLIPKHTEKKDHSKEKIIYPVSGSETSHPRRKMNDIAA----GVI-------------NEVPFRQRCTRHTNEPEQSVTECHTMCPQHPTDEHRSEAI

Query:  ERHEGGVDSPFFLHHAAIEDDQPRNSLEADHGGCRELPCIVGLVVPV
        +RHEG VD P  LH AA++  QPR+ LE D    RELP +V  V P+
Subjt:  ERHEGGVDSPFFLHHAAIEDDQPRNSLEADHGGCRELPCIVGLVVPV

A0A1Z5S3Z4 Uncharacterized protein1.5e-1145.05Show/hide
Query:  GVINEVPFRQRCTRHTNEPEQSVTECHTMCPQHPTDEHRSEAIERHEGGVDSPFFLHHAAIEDDQPRNSLEADHGGCRELPCIVGLVVPVG
        G+ +EV   QR  R   + ++ V E H + P HP D H  E +ERHEGGV  P  LHHAA+E  Q R +L+      R+LP +V LV PVG
Subjt:  GVINEVPFRQRCTRHTNEPEQSVTECHTMCPQHPTDEHRSEAIERHEGGVDSPFFLHHAAIEDDQPRNSLEADHGGCRELPCIVGLVVPVG

A0A4S8JNE0 Uncharacterized protein8.5e-1251.43Show/hide
Query:  VTECHTMCPQHPTDEHRSEAIERHEGGVDSPFFLHHAAIEDDQPRNSLEADHGGCRELPCIVGLVVPVGN
        V + H + P  P D    E +ERHEGGVD P  LH  A+EDD+PR++L+AD  G   LPC+V LV PVG+
Subjt:  VTECHTMCPQHPTDEHRSEAIERHEGGVDSPFFLHHAAIEDDQPRNSLEADHGGCRELPCIVGLVVPVGN

C0P4G7 Uncharacterized protein2.5e-1142.39Show/hide
Query:  AGVINEVPFRQRCTRHTNEPEQSVTECHTMCPQHPTDEHRSEAIERHEGGVDSPFFLHHAAIEDDQPRNSLEADHGGCRELPCIVGLVVPVG
        AG+ ++    QR  R   + +Q V E H + P HP D HR E ++RHEG V  P  LHHAA++D Q R +L+      R+LP +V LV P+G
Subjt:  AGVINEVPFRQRCTRHTNEPEQSVTECHTMCPQHPTDEHRSEAIERHEGGVDSPFFLHHAAIEDDQPRNSLEADHGGCRELPCIVGLVVPVG

J3L5H7 Uncharacterized protein9.1e-1429.72Show/hide
Query:  ASDVIRPAANGAPPLNPVQPSQRNPAPNTMWSMLFGGKLCLSRECRGPTCGHGHQIRNHHHYNLI-----------------------------PKHTEK
        A+D +   A GAPPLNP QPS  +P P  M  MLFG    LS    GPT G G         + +                             P+  E+
Subjt:  ASDVIRPAANGAPPLNPVQPSQRNPAPNTMWSMLFGGKLCLSRECRGPTCGHGHQIRNHHHYNLI-----------------------------PKHTEK

Query:  KDHSKEKIIYPVSGSETSHPR---------------------RKMNDIAAGVI---------NEVPFRQRCTRHTNEPEQSVTECHTMCPQHPTDEHRSE
          H +  +  P  G    H R                     R++ D    V+         +E   R R      E EQ V E H    QHP DE    
Subjt:  KDHSKEKIIYPVSGSETSHPR---------------------RKMNDIAAGVI---------NEVPFRQRCTRHTNEPEQSVTECHTMCPQHPTDEHRSE

Query:  AIERHEGGVDSPFFLHHAAIEDDQPRNSLEADHGGCRELPCIVGLVVPV
         ++ HEGGVD P  LH AA++  +PR+ LE D G  R+LP +V  V P+
Subjt:  AIERHEGGVDSPFFLHHAAIEDDQPRNSLEADHGGCRELPCIVGLVVPV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAGCGACGTAATCCGACCCGCTGCAAATGGAGCTCCTCCATTGAATCCAGTCCAGCCCAGCCAAAGAAACCCTGCCCCAAATACCATGTGGAGTATGTTGTTTGG
TGGGAAGCTTTGCCTGTCGCGGGAGTGTCGTGGCCCGACCTGTGGGCACGGTCACCAGATCAGAAACCATCATCACTACAACTTGATACCAAAGCATACAGAGAAGAAAG
ATCACAGCAAAGAGAAGATCATTTACCCAGTAAGCGGCAGTGAAACCAGCCACCCCAGAAGAAAGATGAATGACATAGCCGCCGGCGTAATCAATGAGGTACCCTTCAGA
CAGCGCTGCACCAGGCACACCAATGAGCCAGAACAATCGGTCACCGAATGCCATACGATGTGCCCACAACACCCAACAGACGAGCACAGAAGCGAAGCCATAGAGCGCCA
TGAAGGCGGAGTTGACAGCCCATTTTTTCTTCACCATGCTGCCATAGAGGATGACCAGCCCCGGAACAGTTTGGAGGCCGACCATGGTGGCTGCCGTGAGCTGCCATGCA
TTGTCGGCCTTGTTGTTCCAGTAGGGAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTAGCGACGTAATCCGACCCGCTGCAAATGGAGCTCCTCCATTGAATCCAGTCCAGCCCAGCCAAAGAAACCCTGCCCCAAATACCATGTGGAGTATGTTGTTTGG
TGGGAAGCTTTGCCTGTCGCGGGAGTGTCGTGGCCCGACCTGTGGGCACGGTCACCAGATCAGAAACCATCATCACTACAACTTGATACCAAAGCATACAGAGAAGAAAG
ATCACAGCAAAGAGAAGATCATTTACCCAGTAAGCGGCAGTGAAACCAGCCACCCCAGAAGAAAGATGAATGACATAGCCGCCGGCGTAATCAATGAGGTACCCTTCAGA
CAGCGCTGCACCAGGCACACCAATGAGCCAGAACAATCGGTCACCGAATGCCATACGATGTGCCCACAACACCCAACAGACGAGCACAGAAGCGAAGCCATAGAGCGCCA
TGAAGGCGGAGTTGACAGCCCATTTTTTCTTCACCATGCTGCCATAGAGGATGACCAGCCCCGGAACAGTTTGGAGGCCGACCATGGTGGCTGCCGTGAGCTGCCATGCA
TTGTCGGCCTTGTTGTTCCAGTAGGGAATTGA
Protein sequenceShow/hide protein sequence
MASDVIRPAANGAPPLNPVQPSQRNPAPNTMWSMLFGGKLCLSRECRGPTCGHGHQIRNHHHYNLIPKHTEKKDHSKEKIIYPVSGSETSHPRRKMNDIAAGVINEVPFR
QRCTRHTNEPEQSVTECHTMCPQHPTDEHRSEAIERHEGGVDSPFFLHHAAIEDDQPRNSLEADHGGCRELPCIVGLVVPVGN