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Carg00573 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg00573
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUPF0434 protein
Genome locationCarg_Chr03:5656180..5657574
RNA-Seq ExpressionCarg00573
SyntenyCarg00573
Gene Ontology termsNA
InterPro domainsIPR005651 - Trm112-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6603894.1 hypothetical protein SDJN03_04503, partial [Cucurbita argyrosperma subsp. sororia]9.5e-34100Show/hide
Query:  MVRISQSLLKEAGSGLTKTLSEILVCPLSKQPLRYCEASNSLISDTIRVSFPIRGGVPCLVPKEGRIIETDDGLKG
        MVRISQSLLKEAGSGLTKTLSEILVCPLSKQPLRYCEASNSLISDTIRVSFPIRGGVPCLVPKEGRIIETDDGLKG
Subjt:  MVRISQSLLKEAGSGLTKTLSEILVCPLSKQPLRYCEASNSLISDTIRVSFPIRGGVPCLVPKEGRIIETDDGLKG

XP_008440859.1 PREDICTED: UPF0434 protein ECH_0194 [Cucumis melo]1.1e-3286.05Show/hide
Query:  MVRISQSLLKEAGSGLTKTLSEILVCPLSKQPLRYCEASNSLISDTIRVSFPIRGGVPCLVPKEGRIIETDDGLKGEDTVEIPREK
        MVRIS++LLKEA SG T TLS+ILVCPLSKQPLRYCEASNSLISDTI VSFPIR G+PCLVPKEGRIIE DD LKGEDTVEI REK
Subjt:  MVRISQSLLKEAGSGLTKTLSEILVCPLSKQPLRYCEASNSLISDTIRVSFPIRGGVPCLVPKEGRIIETDDGLKGEDTVEIPREK

XP_022949957.1 uncharacterized protein LOC111453193 [Cucurbita moschata]1.5e-39100Show/hide
Query:  MVRISQSLLKEAGSGLTKTLSEILVCPLSKQPLRYCEASNSLISDTIRVSFPIRGGVPCLVPKEGRIIETDDGLKGEDTVEIPREK
        MVRISQSLLKEAGSGLTKTLSEILVCPLSKQPLRYCEASNSLISDTIRVSFPIRGGVPCLVPKEGRIIETDDGLKGEDTVEIPREK
Subjt:  MVRISQSLLKEAGSGLTKTLSEILVCPLSKQPLRYCEASNSLISDTIRVSFPIRGGVPCLVPKEGRIIETDDGLKGEDTVEIPREK

XP_022977422.1 uncharacterized protein LOC111477769 isoform X2 [Cucurbita maxima]7.5e-3998.84Show/hide
Query:  MVRISQSLLKEAGSGLTKTLSEILVCPLSKQPLRYCEASNSLISDTIRVSFPIRGGVPCLVPKEGRIIETDDGLKGEDTVEIPREK
        MVRISQSLLKEAGSGLTKTLSEILVCPLSKQPLRYCEASNSLISDTIRVSFPIRGGVPCLVPKEG IIETDDGLKGEDTVEIPREK
Subjt:  MVRISQSLLKEAGSGLTKTLSEILVCPLSKQPLRYCEASNSLISDTIRVSFPIRGGVPCLVPKEGRIIETDDGLKGEDTVEIPREK

XP_038883681.1 UPF0434 protein Ecaj_0131 [Benincasa hispida]1.1e-3284.88Show/hide
Query:  MVRISQSLLKEAGSGLTKTLSEILVCPLSKQPLRYCEASNSLISDTIRVSFPIRGGVPCLVPKEGRIIETDDGLKGEDTVEIPREK
        MV+IS++LLKEA SG TKTLSEILVCPLSKQPLRYCEASNSLISDTI VSFPIR G+PCLVPK+GRIIET+D LKGEDTVE+ REK
Subjt:  MVRISQSLLKEAGSGLTKTLSEILVCPLSKQPLRYCEASNSLISDTIRVSFPIRGGVPCLVPKEGRIIETDDGLKGEDTVEIPREK

TrEMBL top hitse value%identityAlignment
A0A0A0KHC1 Uncharacterized protein6.2e-3182.56Show/hide
Query:  MVRISQSLLKEAGSGLTKTLSEILVCPLSKQPLRYCEASNSLISDTIRVSFPIRGGVPCLVPKEGRIIETDDGLKGEDTVEIPREK
        MVRI+++LLKEA SG T TLS+ILVCPLSKQPLRYC ASNSLISDTI VSFPIR G+PCLVPKEGRIIE DD LK EDTVEI REK
Subjt:  MVRISQSLLKEAGSGLTKTLSEILVCPLSKQPLRYCEASNSLISDTIRVSFPIRGGVPCLVPKEGRIIETDDGLKGEDTVEIPREK

A0A1S3B2Q6 UPF0434 protein ECH_01945.1e-3386.05Show/hide
Query:  MVRISQSLLKEAGSGLTKTLSEILVCPLSKQPLRYCEASNSLISDTIRVSFPIRGGVPCLVPKEGRIIETDDGLKGEDTVEIPREK
        MVRIS++LLKEA SG T TLS+ILVCPLSKQPLRYCEASNSLISDTI VSFPIR G+PCLVPKEGRIIE DD LKGEDTVEI REK
Subjt:  MVRISQSLLKEAGSGLTKTLSEILVCPLSKQPLRYCEASNSLISDTIRVSFPIRGGVPCLVPKEGRIIETDDGLKGEDTVEIPREK

A0A5A7SJZ8 UPF0434 protein5.1e-3386.05Show/hide
Query:  MVRISQSLLKEAGSGLTKTLSEILVCPLSKQPLRYCEASNSLISDTIRVSFPIRGGVPCLVPKEGRIIETDDGLKGEDTVEIPREK
        MVRIS++LLKEA SG T TLS+ILVCPLSKQPLRYCEASNSLISDTI VSFPIR G+PCLVPKEGRIIE DD LKGEDTVEI REK
Subjt:  MVRISQSLLKEAGSGLTKTLSEILVCPLSKQPLRYCEASNSLISDTIRVSFPIRGGVPCLVPKEGRIIETDDGLKGEDTVEIPREK

A0A6J1GDI4 uncharacterized protein LOC1114531937.4e-40100Show/hide
Query:  MVRISQSLLKEAGSGLTKTLSEILVCPLSKQPLRYCEASNSLISDTIRVSFPIRGGVPCLVPKEGRIIETDDGLKGEDTVEIPREK
        MVRISQSLLKEAGSGLTKTLSEILVCPLSKQPLRYCEASNSLISDTIRVSFPIRGGVPCLVPKEGRIIETDDGLKGEDTVEIPREK
Subjt:  MVRISQSLLKEAGSGLTKTLSEILVCPLSKQPLRYCEASNSLISDTIRVSFPIRGGVPCLVPKEGRIIETDDGLKGEDTVEIPREK

A0A6J1IIE0 uncharacterized protein LOC111477769 isoform X23.7e-3998.84Show/hide
Query:  MVRISQSLLKEAGSGLTKTLSEILVCPLSKQPLRYCEASNSLISDTIRVSFPIRGGVPCLVPKEGRIIETDDGLKGEDTVEIPREK
        MVRISQSLLKEAGSGLTKTLSEILVCPLSKQPLRYCEASNSLISDTIRVSFPIRGGVPCLVPKEG IIETDDGLKGEDTVEIPREK
Subjt:  MVRISQSLLKEAGSGLTKTLSEILVCPLSKQPLRYCEASNSLISDTIRVSFPIRGGVPCLVPKEGRIIETDDGLKGEDTVEIPREK

SwissProt top hitse value%identityAlignment
A4YK44 UPF0434 protein BRADO03131.6e-0740.98Show/hide
Query:  LKEAGSGLTKTLSEILVCPLSKQPLRYCEASNSLISDTIRVSFPIRGGVPCLVPKEGRIIE
        L+   + +   L EILVCP++K PL Y  A   LIS + ++++PIR G+P ++P+E R I+
Subjt:  LKEAGSGLTKTLSEILVCPLSKQPLRYCEASNSLISDTIRVSFPIRGGVPCLVPKEGRIIE

Q0BWC7 UPF0434 protein HNE_35453.8e-0941.43Show/hide
Query:  SLLKEAGSGLTKTLSEILVCPLSKQPLRYCEASNSLISDTIRVSFPIRGGVPCLVPKEGRIIETDDGLKG
        S+L EA +G+   L EIL+CP ++QPL Y  A + L+S   R+++PIRGG+P ++ +E R ++  +G  G
Subjt:  SLLKEAGSGLTKTLSEILVCPLSKQPLRYCEASNSLISDTIRVSFPIRGGVPCLVPKEGRIIETDDGLKG

Q5FFA6 UPF0434 protein ERGA_CDS_012603.6e-0746.3Show/hide
Query:  LTKTLSEILVCPLSKQPLRYCEASNSLISDTIRVSFPIRGGVPCLVPKEGRIIE
        + K L EILVCPL+K+ L Y + +N LIS   +++FPIR G+P ++  E R +E
Subjt:  LTKTLSEILVCPLSKQPLRYCEASNSLISDTIRVSFPIRGGVPCLVPKEGRIIE

Q5HC42 UPF0434 protein Erum1340/ERWE_CDS_013003.6e-0746.3Show/hide
Query:  LTKTLSEILVCPLSKQPLRYCEASNSLISDTIRVSFPIRGGVPCLVPKEGRIIE
        + K L EILVCPL+K+ L Y + +N LIS   +++FPIR G+P ++  E R +E
Subjt:  LTKTLSEILVCPLSKQPLRYCEASNSLISDTIRVSFPIRGGVPCLVPKEGRIIE

Q5M8Z2 Protein preY, mitochondrial8.5e-0942.62Show/hide
Query:  TLSEILVCPLSKQPLRYCEASNSLISDTIRVSFPIRGGVPCLVPKEGRIIETDDGLKGEDT
        TL + LVCPLS++ LRY E++N LI+D + +++PI  G+P ++P++ R+I  D   +  DT
Subjt:  TLSEILVCPLSKQPLRYCEASNSLISDTIRVSFPIRGGVPCLVPKEGRIIETDDGLKGEDT

Arabidopsis top hitse value%identityAlignment
AT4G35905.1 unknown protein9.5e-2467.61Show/hide
Query:  MVRISQSLLKEAGSGLTKTLSEILVCPLSKQPLRYCEASNSLISDTIRVSFPIRGGVPCLVPKEGRIIETD
        MVR+++ LLK+AG+ + KTLSEILVCPLSKQPLR+CE + SL+SDTI VSFPI+ G+PCLVPK+G+I+E +
Subjt:  MVRISQSLLKEAGSGLTKTLSEILVCPLSKQPLRYCEASNSLISDTIRVSFPIRGGVPCLVPKEGRIIETD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGCGAATAAGCCAATCGCTTCTGAAGGAAGCGGGCTCTGGTCTCACCAAAACTCTCTCCGAGATCCTGGTCTGCCCTCTCTCCAAACAACCTCTAAGGTATTGCGA
GGCGTCGAATTCTCTAATCAGCGATACGATTCGTGTTTCTTTCCCTATAAGGGGCGGAGTTCCTTGCTTGGTGCCAAAGGAAGGAAGGATAATCGAAACTGACGATGGAT
TGAAAGGTGAGGATACCGTCGAGATTCCTCGAGAAAAATGA
mRNA sequenceShow/hide mRNA sequence
TATAATTAATCATGAACTTGTAAAAAAATAATTAACGGAAAAAAACAGAAAAAGAAAAACCCTCAATTGCCGACTCTCCGACGTTTCGAAGCAGAAACTCAAACCGGGAA
AAATTGAATCCAGCTAATGGTGCGAATAAGCCAATCGCTTCTGAAGGAAGCGGGCTCTGGTCTCACCAAAACTCTCTCCGAGATCCTGGTCTGCCCTCTCTCCAAACAAC
CTCTAAGGTATTGCGAGGCGTCGAATTCTCTAATCAGCGATACGATTCGTGTTTCTTTCCCTATAAGGGGCGGAGTTCCTTGCTTGGTGCCAAAGGAAGGAAGGATAATC
GAAACTGACGATGGATTGAAAGGTGAGGATACCGTCGAGATTCCTCGAGAAAAATGAGCTATGCTTGTTTGGGAGCGGAAGACAATTTTTATTTCTTGAGCTGAATAGTG
AGAATAGATGTCAACCTAATGGCACTACACCTGTGTGTTTATGCTTTGAAGTTTCCACTTTAGAATGATTTGAATGGTCTCATTTCCTGAAAATTTCTGGCGTTGCCCAA
TAAAATAGTCAGATCAGACTACTTGTCCATCTTTCTTTTGTACTCTTTTCTAGCGATTGGGGTAGGTTAAACAGAATATCTAATTTTTTCTGCTTAAAACTTTTGGGCTT
GTGTTGAATTGTCTGAGGGTGAATCGTTTCTTTAGCTTTTACTGACATGGAAGGGCATCGTTGGATGATCATCTCTTTAGTTCTCGGAAAATAAACTTTCGTGTTCAGAT
CAAGTCAACCATGATCTCCTTTACATTGTTCTGTTTGGGTTAGGACACACGCCAGTTTGGTAAACATCGGGTTGTTCTATGTAAAAACACGGTGTGCATGGTATGGAACA
TGCTAAGGACAACGAAATTATTA
Protein sequenceShow/hide protein sequence
MVRISQSLLKEAGSGLTKTLSEILVCPLSKQPLRYCEASNSLISDTIRVSFPIRGGVPCLVPKEGRIIETDDGLKGEDTVEIPREK