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Carg00597 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg00597
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionTransmembrane protein
Genome locationCarg_Chr03:5793065..5793658
RNA-Seq ExpressionCarg00597
SyntenyCarg00597
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6603917.1 hypothetical protein SDJN03_04526, partial [Cucurbita argyrosperma subsp. sororia]8.1e-105100Show/hide
Query:  MDKATPPVEVLTAQQEAMEATSLHRFLASKPPLLTIDPHKFSLTSQNQVFFLSLRHQQPLRIKPINATDTDGDSAPPQVPPTITPPETVDVRFRKRSRRR
        MDKATPPVEVLTAQQEAMEATSLHRFLASKPPLLTIDPHKFSLTSQNQVFFLSLRHQQPLRIKPINATDTDGDSAPPQVPPTITPPETVDVRFRKRSRRR
Subjt:  MDKATPPVEVLTAQQEAMEATSLHRFLASKPPLLTIDPHKFSLTSQNQVFFLSLRHQQPLRIKPINATDTDGDSAPPQVPPTITPPETVDVRFRKRSRRR

Query:  SKQESEDGAAMGNVRARKAPVEIASKKPKKWEEMDLAEKATELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSIFKG
        SKQESEDGAAMGNVRARKAPVEIASKKPKKWEEMDLAEKATELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSIFKG
Subjt:  SKQESEDGAAMGNVRARKAPVEIASKKPKKWEEMDLAEKATELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSIFKG
XP_022950633.1 uncharacterized protein LOC111453672 [Cucurbita moschata]4.2e-9398.33Show/hide
Query:  MEATSLHRFLASKPPLLTIDPHKFSLTSQNQVFFLSLRHQQPLRIKPINATDTDGDSAPPQVPPTITPPETVDVRFRKRSRRRSKQESEDGAAMGNVRAR
        MEATSLHRFLASKPPLLTIDPHKFS TSQNQVFFLSLRHQQPLRIKPINATDTDGDSAPPQVPP ITPPETVDVRFRKRSRRRSKQESEDGAAMGNV AR
Subjt:  MEATSLHRFLASKPPLLTIDPHKFSLTSQNQVFFLSLRHQQPLRIKPINATDTDGDSAPPQVPPTITPPETVDVRFRKRSRRRSKQESEDGAAMGNVRAR

Query:  KAPVEIASKKPKKWEEMDLAEKATELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSIFKG
        KAPVEIASKKPKKWEEMDLAEKATELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSIFKG
Subjt:  KAPVEIASKKPKKWEEMDLAEKATELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSIFKG
XP_022979054.1 uncharacterized protein LOC111478809 [Cucurbita maxima]4.6e-9297.22Show/hide
Query:  MEATSLHRFLASKPPLLTIDPHKFSLTSQNQVFFLSLRHQQPLRIKPINATDTDGDSAPPQVPPTITPPETVDVRFRKRSRRRSKQESEDGAAMGNVRAR
        ME+TSLHRFLAS+PPLLTI PHKFS TSQNQVFFLSLRHQQPLRIKPINATDTDGDSAPPQVPP ITPPETVDVRFRKRSRRRSKQESEDGAAMGNVRAR
Subjt:  MEATSLHRFLASKPPLLTIDPHKFSLTSQNQVFFLSLRHQQPLRIKPINATDTDGDSAPPQVPPTITPPETVDVRFRKRSRRRSKQESEDGAAMGNVRAR

Query:  KAPVEIASKKPKKWEEMDLAEKATELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSIFKG
        KAPVEIASKKPKKWEEMDLAEKATELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSIFKG
Subjt:  KAPVEIASKKPKKWEEMDLAEKATELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSIFKG
XP_023522380.1 uncharacterized protein LOC111786303, partial [Cucurbita pepo subsp. pepo]4.1e-8098.73Show/hide
Query:  FSLTSQNQVFFLSLRHQQPLRIKPINATDTDGDSAPPQVPPTITPPETVDVRFRKRSRRRSKQESEDGAAMGNVRARKAPVEIASKKPKKWEEMDLAEKA
        FS TSQNQVFFLSLRHQQPLRIKPINATDTDGDSAPPQVPP ITPPETVDVRFRKRSRRRSKQESEDGAAMGNVRARKAPVEIASKKPKKWEEMDLAEKA
Subjt:  FSLTSQNQVFFLSLRHQQPLRIKPINATDTDGDSAPPQVPPTITPPETVDVRFRKRSRRRSKQESEDGAAMGNVRARKAPVEIASKKPKKWEEMDLAEKA

Query:  TELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSIFKG
        TELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSIFKG
Subjt:  TELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSIFKG
XP_023544554.1 uncharacterized protein LOC111804097 [Cucurbita pepo subsp. pepo]6.5e-9498.89Show/hide
Query:  MEATSLHRFLASKPPLLTIDPHKFSLTSQNQVFFLSLRHQQPLRIKPINATDTDGDSAPPQVPPTITPPETVDVRFRKRSRRRSKQESEDGAAMGNVRAR
        MEATSLHRFLASKPPLLTIDPHKFS TSQNQVFFLSLRHQQPLRIKPINATDTDGDSAPPQVPP ITPPETVDVRFRKRSRRRSKQESEDGAAMGNVRAR
Subjt:  MEATSLHRFLASKPPLLTIDPHKFSLTSQNQVFFLSLRHQQPLRIKPINATDTDGDSAPPQVPPTITPPETVDVRFRKRSRRRSKQESEDGAAMGNVRAR

Query:  KAPVEIASKKPKKWEEMDLAEKATELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSIFKG
        KAPVEIASKKPKKWEEMDLAEKATELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSIFKG
Subjt:  KAPVEIASKKPKKWEEMDLAEKATELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSIFKG
TrEMBL top hitse value%identityAlignment
A0A0A0KME2 Uncharacterized protein5.7e-8079.19Show/hide
Query:  MDKATPPVEVLTAQQEAMEATSLHRFLASKPPLLTIDPHKFSLTSQNQVFFLSLRHQQPLRIKPINATDTDGDSAPPQVPPTITPPETVDVRFRKRSRRR
        MDKATP  E    + E ME+ SLH+ LASKPPL TI+P KFS TSQ Q+FF +LRHQ+PLRIKPINAT TDGD+APPQVPP ITPPETV+VRFRKRSRRR
Subjt:  MDKATPPVEVLTAQQEAMEATSLHRFLASKPPLLTIDPHKFSLTSQNQVFFLSLRHQQPLRIKPINATDTDGDSAPPQVPPTITPPETVDVRFRKRSRRR

Query:  SKQESEDGAAMGNVRARKAPVEIASKKPKKWEEMDLAEKATELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSIFKG
        SKQE EDGAAMGN R RKA  E+ S K KKWEEM +AEK  E+YMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTS+FKG
Subjt:  SKQESEDGAAMGNVRARKAPVEIASKKPKKWEEMDLAEKATELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSIFKG
A0A1S3B215 uncharacterized protein LOC1034851194.1e-7883.33Show/hide
Query:  MEATSLHRFLASKPPLLTIDPHKFSLTSQNQVFFLSLRHQQPLRIKPINATDTDGDSAPPQVPPTITPPETVDVRFRKRSRRRSKQESEDGAAMGNVRAR
        ME+ SLH+ LASKPPL TI+P KFS TSQ Q+FF SLR Q+PLRIKPINATDTDGD+APPQVPP ITPPETV+VRFRKRSRRRSK+E EDGAAMGN R R
Subjt:  MEATSLHRFLASKPPLLTIDPHKFSLTSQNQVFFLSLRHQQPLRIKPINATDTDGDSAPPQVPPTITPPETVDVRFRKRSRRRSKQESEDGAAMGNVRAR

Query:  KAPVEIASKKPKKWEEMDLAEKATELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSIFKG
        KA VE++S K KKWEEM + EKA ELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTS+FKG
Subjt:  KAPVEIASKKPKKWEEMDLAEKATELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSIFKG
A0A5A7SKL6 Putative transmembrane protein4.1e-7883.33Show/hide
Query:  MEATSLHRFLASKPPLLTIDPHKFSLTSQNQVFFLSLRHQQPLRIKPINATDTDGDSAPPQVPPTITPPETVDVRFRKRSRRRSKQESEDGAAMGNVRAR
        ME+ SLH+ LASKPPL TI+P KFS TSQ Q+FF SLR Q+PLRIKPINATDTDGD+APPQVPP ITPPETV+VRFRKRSRRRSK+E EDGAAMGN R R
Subjt:  MEATSLHRFLASKPPLLTIDPHKFSLTSQNQVFFLSLRHQQPLRIKPINATDTDGDSAPPQVPPTITPPETVDVRFRKRSRRRSKQESEDGAAMGNVRAR

Query:  KAPVEIASKKPKKWEEMDLAEKATELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSIFKG
        KA VE++S K KKWEEM + EKA ELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTS+FKG
Subjt:  KAPVEIASKKPKKWEEMDLAEKATELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSIFKG
A0A6J1GFF1 uncharacterized protein LOC1114536722.0e-9398.33Show/hide
Query:  MEATSLHRFLASKPPLLTIDPHKFSLTSQNQVFFLSLRHQQPLRIKPINATDTDGDSAPPQVPPTITPPETVDVRFRKRSRRRSKQESEDGAAMGNVRAR
        MEATSLHRFLASKPPLLTIDPHKFS TSQNQVFFLSLRHQQPLRIKPINATDTDGDSAPPQVPP ITPPETVDVRFRKRSRRRSKQESEDGAAMGNV AR
Subjt:  MEATSLHRFLASKPPLLTIDPHKFSLTSQNQVFFLSLRHQQPLRIKPINATDTDGDSAPPQVPPTITPPETVDVRFRKRSRRRSKQESEDGAAMGNVRAR

Query:  KAPVEIASKKPKKWEEMDLAEKATELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSIFKG
        KAPVEIASKKPKKWEEMDLAEKATELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSIFKG
Subjt:  KAPVEIASKKPKKWEEMDLAEKATELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSIFKG
A0A6J1IVM3 uncharacterized protein LOC1114788092.2e-9297.22Show/hide
Query:  MEATSLHRFLASKPPLLTIDPHKFSLTSQNQVFFLSLRHQQPLRIKPINATDTDGDSAPPQVPPTITPPETVDVRFRKRSRRRSKQESEDGAAMGNVRAR
        ME+TSLHRFLAS+PPLLTI PHKFS TSQNQVFFLSLRHQQPLRIKPINATDTDGDSAPPQVPP ITPPETVDVRFRKRSRRRSKQESEDGAAMGNVRAR
Subjt:  MEATSLHRFLASKPPLLTIDPHKFSLTSQNQVFFLSLRHQQPLRIKPINATDTDGDSAPPQVPPTITPPETVDVRFRKRSRRRSKQESEDGAAMGNVRAR

Query:  KAPVEIASKKPKKWEEMDLAEKATELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSIFKG
        KAPVEIASKKPKKWEEMDLAEKATELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSIFKG
Subjt:  KAPVEIASKKPKKWEEMDLAEKATELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSIFKG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G17972.1 unknown protein6.3e-3146.89Show/hide
Query:  SLHRFLASKPPLLTIDPHKFSLTSQNQVFFLSLRHQQPLRIKPINATDTDGDSAPPQVPPTITPP-ETVDVRFRKRSRRRSKQESEDGAAMGNVRARKAP
        SLH FLA    ++ +    ++ T     F L   H+   R   IN  ++ GD         IT P + V++RF++ SRR+ ++E   G   G    +K  
Subjt:  SLHRFLASKPPLLTIDPHKFSLTSQNQVFFLSLRHQQPLRIKPINATDTDGDSAPPQVPPTITPP-ETVDVRFRKRSRRRSKQESEDGAAMGNVRARKAP

Query:  VEIASKKPKKWEEMDLAEKATELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSIFKG
        V+      K WEEM L EKA ELY+GEKGLLFWLNK AYASI+I+IGGWI FRFVGP+ NLYQLDTPPL P +I KG
Subjt:  VEIASKKPKKWEEMDLAEKATELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSIFKG

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAAAGCAACTCCGCCAGTCGAAGTGCTCACTGCTCAGCAAGAAGCCATGGAAGCGACCAGTCTCCACCGATTTCTGGCGTCTAAACCGCCGCTCTTGACCATCGA
TCCACATAAATTCTCCCTTACATCTCAGAATCAGGTATTCTTTCTATCTCTACGCCATCAACAGCCTCTCAGGATCAAACCGATCAACGCCACGGACACCGACGGCGACA
GCGCGCCACCGCAGGTTCCGCCGACAATAACGCCTCCGGAGACGGTTGATGTTCGGTTTCGGAAGAGGTCGAGAAGACGATCGAAACAGGAGAGCGAGGATGGAGCGGCG
ATGGGGAATGTGCGGGCGAGAAAGGCGCCGGTGGAGATTGCTTCCAAGAAGCCTAAGAAATGGGAGGAGATGGACTTGGCGGAGAAGGCGACGGAGCTGTATATGGGAGA
GAAGGGTTTGTTGTTTTGGCTAAACAAGTTTGCTTATGCTTCCATTTTTATCATGATTGGTGGTTGGATTGTGTTCCGATTTGTTGGGCCTTCGCTCAATCTTTACCAGT
TGGATACTCCACCATTATCTCCGACTTCCATTTTCAAGGGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATAAAGCAACTCCGCCAGTCGAAGTGCTCACTGCTCAGCAAGAAGCCATGGAAGCGACCAGTCTCCACCGATTTCTGGCGTCTAAACCGCCGCTCTTGACCATCGA
TCCACATAAATTCTCCCTTACATCTCAGAATCAGGTATTCTTTCTATCTCTACGCCATCAACAGCCTCTCAGGATCAAACCGATCAACGCCACGGACACCGACGGCGACA
GCGCGCCACCGCAGGTTCCGCCGACAATAACGCCTCCGGAGACGGTTGATGTTCGGTTTCGGAAGAGGTCGAGAAGACGATCGAAACAGGAGAGCGAGGATGGAGCGGCG
ATGGGGAATGTGCGGGCGAGAAAGGCGCCGGTGGAGATTGCTTCCAAGAAGCCTAAGAAATGGGAGGAGATGGACTTGGCGGAGAAGGCGACGGAGCTGTATATGGGAGA
GAAGGGTTTGTTGTTTTGGCTAAACAAGTTTGCTTATGCTTCCATTTTTATCATGATTGGTGGTTGGATTGTGTTCCGATTTGTTGGGCCTTCGCTCAATCTTTACCAGT
TGGATACTCCACCATTATCTCCGACTTCCATTTTCAAGGGCTGA
Protein sequenceShow/hide protein sequence
MDKATPPVEVLTAQQEAMEATSLHRFLASKPPLLTIDPHKFSLTSQNQVFFLSLRHQQPLRIKPINATDTDGDSAPPQVPPTITPPETVDVRFRKRSRRRSKQESEDGAA
MGNVRARKAPVEIASKKPKKWEEMDLAEKATELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSIFKG