; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg00602 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg00602
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionhistone H1
Genome locationCarg_Chr03:5812283..5813762
RNA-Seq ExpressionCarg00602
SyntenyCarg00602
Gene Ontology termsGO:0006334 - nucleosome assembly (biological process)
GO:0016584 - nucleosome positioning (biological process)
GO:0030261 - chromosome condensation (biological process)
GO:0045910 - negative regulation of DNA recombination (biological process)
GO:0000786 - nucleosome (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0003690 - double-stranded DNA binding (molecular function)
GO:0008168 - methyltransferase activity (molecular function)
GO:0031492 - nucleosomal DNA binding (molecular function)
InterPro domainsIPR005818 - Linker histone H1/H5, domain H15
IPR005819 - Linker histone H1/H5
IPR036388 - Winged helix-like DNA-binding domain superfamily
IPR036390 - Winged helix DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6603923.1 hypothetical protein SDJN03_04532, partial [Cucurbita argyrosperma subsp. sororia]4.5e-9098.53Show/hide
Query:  MSSTGEAEVKVPVEDAPSVEVPSAEETKEAEKPVEEKKSRTSREKKPRQSKVASHPPYFQMIKEAITSLNEKNGSSPYAIAKYMEEKHKEVLPANFRKIL
        MSSTGEAEVKVPVEDAPSVEVPSAEETKEAEK VEEKKSRT REKKPRQSKVASHPPYFQMIKEAITSLNEKNGSSPYAIAKYMEEKHKEVLPANFRKIL
Subjt:  MSSTGEAEVKVPVEDAPSVEVPSAEETKEAEKPVEEKKSRTSREKKPRQSKVASHPPYFQMIKEAITSLNEKNGSSPYAIAKYMEEKHKEVLPANFRKIL

Query:  ALQLKNSTAKGKLRKVKASYELSEAGKKDKKASKVAKANAEKKTKQARTTRATAGKRKDEAASKAAKAVKKVVAKKPKRTTPAKPKQPKSIRSPAAKRAK
        ALQLKNSTAKGKLRK+KASYELSEAGKKDKKASKVAKANAEKKTKQARTTRATAGKRKDEAASKAAKAVKKVVAKKPKRTTPAKPKQPKSIRSPAAKRAK
Subjt:  ALQLKNSTAKGKLRKVKASYELSEAGKKDKKASKVAKANAEKKTKQARTTRATAGKRKDEAASKAAKAVKKVVAKKPKRTTPAKPKQPKSIRSPAAKRAK

Query:  KAVA
        KAVA
Subjt:  KAVA

KAG7034103.1 hypothetical protein SDJN02_03830 [Cucurbita argyrosperma subsp. argyrosperma]6.3e-92100Show/hide
Query:  MSSTGEAEVKVPVEDAPSVEVPSAEETKEAEKPVEEKKSRTSREKKPRQSKVASHPPYFQMIKEAITSLNEKNGSSPYAIAKYMEEKHKEVLPANFRKIL
        MSSTGEAEVKVPVEDAPSVEVPSAEETKEAEKPVEEKKSRTSREKKPRQSKVASHPPYFQMIKEAITSLNEKNGSSPYAIAKYMEEKHKEVLPANFRKIL
Subjt:  MSSTGEAEVKVPVEDAPSVEVPSAEETKEAEKPVEEKKSRTSREKKPRQSKVASHPPYFQMIKEAITSLNEKNGSSPYAIAKYMEEKHKEVLPANFRKIL

Query:  ALQLKNSTAKGKLRKVKASYELSEAGKKDKKASKVAKANAEKKTKQARTTRATAGKRKDEAASKAAKAVKKVVAKKPKRTTPAKPKQPKSIRSPAAKRAK
        ALQLKNSTAKGKLRKVKASYELSEAGKKDKKASKVAKANAEKKTKQARTTRATAGKRKDEAASKAAKAVKKVVAKKPKRTTPAKPKQPKSIRSPAAKRAK
Subjt:  ALQLKNSTAKGKLRKVKASYELSEAGKKDKKASKVAKANAEKKTKQARTTRATAGKRKDEAASKAAKAVKKVVAKKPKRTTPAKPKQPKSIRSPAAKRAK

Query:  KAVA
        KAVA
Subjt:  KAVA

XP_022950733.1 histone H1 [Cucurbita moschata]1.0e-8997.55Show/hide
Query:  MSSTGEAEVKVPVEDAPSVEVPSAEETKEAEKPVEEKKSRTSREKKPRQSKVASHPPYFQMIKEAITSLNEKNGSSPYAIAKYMEEKHKEVLPANFRKIL
        MSSTGEAEVKVP EDAPSVEVPSAEETKEAEKPVEEKKSRT REKKPRQSKVASHPPYFQMI EAITSLNEKNGSSPYAIAKYMEEKHKEVLPANFRKIL
Subjt:  MSSTGEAEVKVPVEDAPSVEVPSAEETKEAEKPVEEKKSRTSREKKPRQSKVASHPPYFQMIKEAITSLNEKNGSSPYAIAKYMEEKHKEVLPANFRKIL

Query:  ALQLKNSTAKGKLRKVKASYELSEAGKKDKKASKVAKANAEKKTKQARTTRATAGKRKDEAASKAAKAVKKVVAKKPKRTTPAKPKQPKSIRSPAAKRAK
        ALQLKNSTAKGKLRK+KASYELSEAGKKDKKASKVAKANAEKKTKQARTTRATAGKRKDEAASKAAKA+KKVVAKKPKRTTPAKPKQPKSIRSPAAKRAK
Subjt:  ALQLKNSTAKGKLRKVKASYELSEAGKKDKKASKVAKANAEKKTKQARTTRATAGKRKDEAASKAAKAVKKVVAKKPKRTTPAKPKQPKSIRSPAAKRAK

Query:  KAVA
        KAVA
Subjt:  KAVA

XP_022979052.1 histone H1 [Cucurbita maxima]4.2e-8896.08Show/hide
Query:  MSSTGEAEVKVPVEDAPSVEVPSAEETKEAEKPVEEKKSRTSREKKPRQSKVASHPPYFQMIKEAITSLNEKNGSSPYAIAKYMEEKHKEVLPANFRKIL
        MSSTGE EVKVP EDAPS EVPSAEE KEAEKPVEEKKSRT REKKPRQSKVASHPPYFQMIKEAITSLNEKNGSSPYAIAKYMEEKHKEVLPANFRKIL
Subjt:  MSSTGEAEVKVPVEDAPSVEVPSAEETKEAEKPVEEKKSRTSREKKPRQSKVASHPPYFQMIKEAITSLNEKNGSSPYAIAKYMEEKHKEVLPANFRKIL

Query:  ALQLKNSTAKGKLRKVKASYELSEAGKKDKKASKVAKANAEKKTKQARTTRATAGKRKDEAASKAAKAVKKVVAKKPKRTTPAKPKQPKSIRSPAAKRAK
        ALQLKNSTAKGKLRK+KASYELSEAGKKDKKASKVAKANAEK TKQARTTRATAGKRKDEAASK AKAVKKVVAKKPKRTTPAKPKQPKSIRSPAAKRAK
Subjt:  ALQLKNSTAKGKLRKVKASYELSEAGKKDKKASKVAKANAEKKTKQARTTRATAGKRKDEAASKAAKAVKKVVAKKPKRTTPAKPKQPKSIRSPAAKRAK

Query:  KAVA
        KAVA
Subjt:  KAVA

XP_023544256.1 histone H1 [Cucurbita pepo subsp. pepo]4.2e-8896.08Show/hide
Query:  MSSTGEAEVKVPVEDAPSVEVPSAEETKEAEKPVEEKKSRTSREKKPRQSKVASHPPYFQMIKEAITSLNEKNGSSPYAIAKYMEEKHKEVLPANFRKIL
        MSSTGEAEVKVP ED+PS EVPSAEE KE+EKPVEEKKSRT R KKPRQSKVASHPPYFQMIKEAITSLNEKNGSSPYAIAKYMEEKHKEVLPANFRKIL
Subjt:  MSSTGEAEVKVPVEDAPSVEVPSAEETKEAEKPVEEKKSRTSREKKPRQSKVASHPPYFQMIKEAITSLNEKNGSSPYAIAKYMEEKHKEVLPANFRKIL

Query:  ALQLKNSTAKGKLRKVKASYELSEAGKKDKKASKVAKANAEKKTKQARTTRATAGKRKDEAASKAAKAVKKVVAKKPKRTTPAKPKQPKSIRSPAAKRAK
        ALQLKNSTAKGKLRK+KASYELSEAGKKDKKASKVAKANAEKKTKQARTTRATAGKRKDEAASKAAKAVKKVVAKKPKRTTPAKPKQPKSIRSPAAKRAK
Subjt:  ALQLKNSTAKGKLRKVKASYELSEAGKKDKKASKVAKANAEKKTKQARTTRATAGKRKDEAASKAAKAVKKVVAKKPKRTTPAKPKQPKSIRSPAAKRAK

Query:  KAVA
        KAVA
Subjt:  KAVA

TrEMBL top hitse value%identityAlignment
A0A0A0KJB6 Histone H11.6e-6982.04Show/hide
Query:  MSSTGE-AEVKVPVEDAPSVEVPSAEETKEAEKPVEEKKSRTSREKKPRQSKVASHPPYFQMIKEAITSLNEKNGSSPYAIAKYMEEKHKEVLPANFRKI
        MSSTGE AEVKVP ED   VEVP+ EE KE EKPV+EKK R +REKKPRQSKVASHPPYFQMI EAI+SLNEKNGSSPYAIAKYMEEKHK VLPANFRKI
Subjt:  MSSTGE-AEVKVPVEDAPSVEVPSAEETKEAEKPVEEKKSRTSREKKPRQSKVASHPPYFQMIKEAITSLNEKNGSSPYAIAKYMEEKHKEVLPANFRKI

Query:  LALQLKNSTAKGKLRKVKASYELSEAG-KKDKKASKVAKANAEKKTKQARTTRATAGKRKDEAASKA-AKAVKKVVAKKPKRTTPAKPKQPKSIRSPAAK
        LALQLKNSTAKGKL K+KASY+LSE G KKD  A+KVAKANAEKKTKQARTTR T  KRK     +A +KAVKKVVAKKPKR+TPAKPKQPKSI+SPAAK
Subjt:  LALQLKNSTAKGKLRKVKASYELSEAG-KKDKKASKVAKANAEKKTKQARTTRATAGKRKDEAASKA-AKAVKKVVAKKPKRTTPAKPKQPKSIRSPAAK

Query:  RAKKAV
        RAKKAV
Subjt:  RAKKAV

A0A1S3B1Z2 histone H14.4e-6781.16Show/hide
Query:  MSSTGE-AEVKVPVEDAPSVE-VPSAEETKEAEKPVEEKKSRTSREKKPRQSKVASHPPYFQMIKEAITSLNEKNGSSPYAIAKYMEEKHKEVLPANFRK
        M+STGE AEVKVP ED   VE VP+ EE KE EKPV+EKK R  REKKPRQSKVASHPPYFQMI EAI+SLNEKNGSSPYAIAKYMEEKHK VLPANFRK
Subjt:  MSSTGE-AEVKVPVEDAPSVE-VPSAEETKEAEKPVEEKKSRTSREKKPRQSKVASHPPYFQMIKEAITSLNEKNGSSPYAIAKYMEEKHKEVLPANFRK

Query:  ILALQLKNSTAKGKLRKVKASYELSEAG-KKDKKASKVAKANAEKKTKQARTTRATAGKRKDEAASKA-AKAVKKVVAKKPKRTTPAKPKQPKSIRSPAA
        ILALQLKNSTAKGKL K+KASY+LSE G KKDK A+KVAKANAEK TKQARTTR T  KRK     +A +KAVKKVVAKKPKR+TPAKPKQPKSI+SPAA
Subjt:  ILALQLKNSTAKGKLRKVKASYELSEAG-KKDKKASKVAKANAEKKTKQARTTRATAGKRKDEAASKA-AKAVKKVVAKKPKRTTPAKPKQPKSIRSPAA

Query:  KRAKKAV
        KRAKKAV
Subjt:  KRAKKAV

A0A5A7SK97 Histone H14.4e-6781.16Show/hide
Query:  MSSTGE-AEVKVPVEDAPSVE-VPSAEETKEAEKPVEEKKSRTSREKKPRQSKVASHPPYFQMIKEAITSLNEKNGSSPYAIAKYMEEKHKEVLPANFRK
        M+STGE AEVKVP ED   VE VP+ EE KE EKPV+EKK R  REKKPRQSKVASHPPYFQMI EAI+SLNEKNGSSPYAIAKYMEEKHK VLPANFRK
Subjt:  MSSTGE-AEVKVPVEDAPSVE-VPSAEETKEAEKPVEEKKSRTSREKKPRQSKVASHPPYFQMIKEAITSLNEKNGSSPYAIAKYMEEKHKEVLPANFRK

Query:  ILALQLKNSTAKGKLRKVKASYELSEAG-KKDKKASKVAKANAEKKTKQARTTRATAGKRKDEAASKA-AKAVKKVVAKKPKRTTPAKPKQPKSIRSPAA
        ILALQLKNSTAKGKL K+KASY+LSE G KKDK A+KVAKANAEK TKQARTTR T  KRK     +A +KAVKKVVAKKPKR+TPAKPKQPKSI+SPAA
Subjt:  ILALQLKNSTAKGKLRKVKASYELSEAG-KKDKKASKVAKANAEKKTKQARTTRATAGKRKDEAASKA-AKAVKKVVAKKPKRTTPAKPKQPKSIRSPAA

Query:  KRAKKAV
        KRAKKAV
Subjt:  KRAKKAV

A0A6J1GFQ2 histone H14.8e-9097.55Show/hide
Query:  MSSTGEAEVKVPVEDAPSVEVPSAEETKEAEKPVEEKKSRTSREKKPRQSKVASHPPYFQMIKEAITSLNEKNGSSPYAIAKYMEEKHKEVLPANFRKIL
        MSSTGEAEVKVP EDAPSVEVPSAEETKEAEKPVEEKKSRT REKKPRQSKVASHPPYFQMI EAITSLNEKNGSSPYAIAKYMEEKHKEVLPANFRKIL
Subjt:  MSSTGEAEVKVPVEDAPSVEVPSAEETKEAEKPVEEKKSRTSREKKPRQSKVASHPPYFQMIKEAITSLNEKNGSSPYAIAKYMEEKHKEVLPANFRKIL

Query:  ALQLKNSTAKGKLRKVKASYELSEAGKKDKKASKVAKANAEKKTKQARTTRATAGKRKDEAASKAAKAVKKVVAKKPKRTTPAKPKQPKSIRSPAAKRAK
        ALQLKNSTAKGKLRK+KASYELSEAGKKDKKASKVAKANAEKKTKQARTTRATAGKRKDEAASKAAKA+KKVVAKKPKRTTPAKPKQPKSIRSPAAKRAK
Subjt:  ALQLKNSTAKGKLRKVKASYELSEAGKKDKKASKVAKANAEKKTKQARTTRATAGKRKDEAASKAAKAVKKVVAKKPKRTTPAKPKQPKSIRSPAAKRAK

Query:  KAVA
        KAVA
Subjt:  KAVA

A0A6J1IMR2 histone H12.0e-8896.08Show/hide
Query:  MSSTGEAEVKVPVEDAPSVEVPSAEETKEAEKPVEEKKSRTSREKKPRQSKVASHPPYFQMIKEAITSLNEKNGSSPYAIAKYMEEKHKEVLPANFRKIL
        MSSTGE EVKVP EDAPS EVPSAEE KEAEKPVEEKKSRT REKKPRQSKVASHPPYFQMIKEAITSLNEKNGSSPYAIAKYMEEKHKEVLPANFRKIL
Subjt:  MSSTGEAEVKVPVEDAPSVEVPSAEETKEAEKPVEEKKSRTSREKKPRQSKVASHPPYFQMIKEAITSLNEKNGSSPYAIAKYMEEKHKEVLPANFRKIL

Query:  ALQLKNSTAKGKLRKVKASYELSEAGKKDKKASKVAKANAEKKTKQARTTRATAGKRKDEAASKAAKAVKKVVAKKPKRTTPAKPKQPKSIRSPAAKRAK
        ALQLKNSTAKGKLRK+KASYELSEAGKKDKKASKVAKANAEK TKQARTTRATAGKRKDEAASK AKAVKKVVAKKPKRTTPAKPKQPKSIRSPAAKRAK
Subjt:  ALQLKNSTAKGKLRKVKASYELSEAGKKDKKASKVAKANAEKKTKQARTTRATAGKRKDEAASKAAKAVKKVVAKKPKRTTPAKPKQPKSIRSPAAKRAK

Query:  KAVA
        KAVA
Subjt:  KAVA

SwissProt top hitse value%identityAlignment
P08283 Histone H12.5e-1948.39Show/hide
Query:  EVPSAEETK-EAEKPVEEKKSRTSREKKPRQSKVASHPPYFQMIKEAITSLNEKNGSSPYAIAKYMEEKHKEVLPANFRKILALQLKNSTAKGKLRKVKA
        EVP  EE K E EK  + K S+  +  KPR    ASHP Y +MIK+AI SL EKNGSS YAIAK++EEK K+ LPANF+K+L   LK + A GKL KVK 
Subjt:  EVPSAEETK-EAEKPVEEKKSRTSREKKPRQSKVASHPPYFQMIKEAITSLNEKNGSSPYAIAKYMEEKHKEVLPANFRKILALQLKNSTAKGKLRKVKA

Query:  SYELSEAGKKDKKASKVAKANAEKKTKQARTTRATAGKRKDEAASKAAKAVK-KVVAKKPKRTTPAKPKQPKSIRSPAAKRAKKAV
        S++LS A KK   A   AK  A+ K+ +A+     A K K +A  K   A K K VA KPK+   AKPK   +   P A + K  V
Subjt:  SYELSEAGKKDKKASKVAKANAEKKTKQARTTRATAGKRKDEAASKAAKAVK-KVVAKKPKRTTPAKPKQPKSIRSPAAKRAKKAV

P23444 Histone H13.4e-1640.93Show/hide
Query:  STGEAEVKVPVEDAPSVEVPSAEETKEAEKPVEEKKSRTSREKKPRQSKVASHPPYFQMIKEAITSLNEKNGSSPYAIAKYMEEKHKEVLPANFRKILAL
        +T   E   P+ DA     P A     A    +   ++  +   P++    +H PY +M+ EAITSL E+ GSS YAIAK++E+KHK  LP NFRK+L +
Subjt:  STGEAEVKVPVEDAPSVEVPSAEETKEAEKPVEEKKSRTSREKKPRQSKVASHPPYFQMIKEAITSLNEKNGSSPYAIAKYMEEKHKEVLPANFRKILAL

Query:  QLKNSTAKGKLRKVKASYELSEAGK---KDKKASKVAKANAEKKTKQARTTRATAGKRKDEAASKAAKAVKKVVAKKPKRTTPAKPK-------QPKSIR
        QLK   A GKL KVK SY+LS A K   K K A K  K  A+K    A+    T  K K     K A   K VV  KPK  TPAKPK       +PK+  
Subjt:  QLKNSTAKGKLRKVKASYELSEAGK---KDKKASKVAKANAEKKTKQARTTRATAGKRKDEAASKAAKAVKKVVAKKPKRTTPAKPK-------QPKSIR

Query:  S---PAAKRAKKAVA
        +   P AK+A +A A
Subjt:  S---PAAKRAKKAVA

P26568 Histone H1.16.9e-1743.35Show/hide
Query:  GEAEVKVPVEDAPSVEVPSAEETKEAEKPVEEKKSRTSREKKPRQSKVASHPPYFQMIKEAITSLNEKNGSSPYAIAKYMEEKHKEVLPANFRKILALQL
        G      PV DA   + P+A+  K   K V+E K + +    P++  V+SHP Y +MIK+AI +L E+ GSS YAI K++EEK KE LP  FRK+L L L
Subjt:  GEAEVKVPVEDAPSVEVPSAEETKEAEKPVEEKKSRTSREKKPRQSKVASHPPYFQMIKEAITSLNEKNGSSPYAIAKYMEEKHKEVLPANFRKILALQL

Query:  KNSTAKGKLRKVKASYELSEAGKKDKKASKVAKANAEKKTKQARTTRATAGKRKDEAASKAAKAVKKVVAKKPK----RTTPAKPKQPKSIRSPAAKRAK
        K   A GKL KVKAS++L  A  K       A+ +A  K K A T   T  KRK  AASKA    KK +A KPK    +   AK K     R+ AA   +
Subjt:  KNSTAKGKLRKVKASYELSEAGKKDKKASKVAKANAEKKTKQARTTRATAGKRKDEAASKAAKAVKKVVAKKPK----RTTPAKPKQPKSIRSPAAKRAK

Query:  KAV
        KAV
Subjt:  KAV

P27806 Histone H12.6e-1642.79Show/hide
Query:  STGEAEVKVPVEDA-----PSVEVPSAEETKEAEKPVEEKKSRTSREKKPRQSKVASHPPYFQMIKEAITSLNEKNGSSPYAIAKYMEEKHKEVLPANFR
        ST  A   +PV         +V+ P+A+  K A K  + KKS T   KKPR +   +HP Y +M+ EAI +L E++GSS  AI K++E+KHK  LPANFR
Subjt:  STGEAEVKVPVEDA-----PSVEVPSAEETKEAEKPVEEKKSRTSREKKPRQSKVASHPPYFQMIKEAITSLNEKNGSSPYAIAKYMEEKHKEVLPANFR

Query:  KILALQLKNSTAKGKLRKVKASYELSEAGKKDKKASKVAKANAEKKTKQARTTRATAGKRKDEAASKAAKAVKKVVAKKP-KRTTPAKPK---QPKSIRS
        KIL  Q+K   A GKL KVK SY+L+       KA    K     K K A   +A A  +K  A S A KA  K  AK P K    AKPK   +PK+   
Subjt:  KILALQLKNSTAKGKLRKVKASYELSEAGKKDKKASKVAKANAEKKTKQARTTRATAGKRKDEAASKAAKAVKKVVAKKP-KRTTPAKPK---QPKSIRS

Query:  PAAKRAKK
        P AK A K
Subjt:  PAAKRAKK

P40267 Histone H16.2e-4256.48Show/hide
Query:  VEDAPSVEVPSAEETKEAEKPVEEKKSRTSREKKPRQSKVASHPPYFQMIKEAITSLNEKNGSSPYAIAKYMEEKHKEVLPANFRKILALQLKNSTAKGK
        VE+   V+ P+     + + P  +KK R  +EKKP+ +K  +HPPYFQMIKEA+ +LNEK GSSPYA+AKYME+KHK+ LPANFRKIL LQLKNS AKGK
Subjt:  VEDAPSVEVPSAEETKEAEKPVEEKKSRTSREKKPRQSKVASHPPYFQMIKEAITSLNEKNGSSPYAIAKYMEEKHKEVLPANFRKILALQLKNSTAKGK

Query:  LRKVKASYELSEAGKKD----KKASKVAKANAEKKTKQARTTRATAGKRKDEAASKAAKAVKKVVAKKPKRTTPAKPKQPKSIRSPAAKRAKK
        L K+KASY+LSEAGKK+        K+ KA+++KK +  R T   A K +    +KA    KKV AK+ +++TPAK KQPKSI+SPAAKRAKK
Subjt:  LRKVKASYELSEAGKKD----KKASKVAKANAEKKTKQARTTRATAGKRKDEAASKAAKAVKKVVAKKPKRTTPAKPKQPKSIRSPAAKRAKK

Arabidopsis top hitse value%identityAlignment
AT1G06760.1 winged-helix DNA-binding transcription factor family protein4.9e-1843.35Show/hide
Query:  GEAEVKVPVEDAPSVEVPSAEETKEAEKPVEEKKSRTSREKKPRQSKVASHPPYFQMIKEAITSLNEKNGSSPYAIAKYMEEKHKEVLPANFRKILALQL
        G      PV DA   + P+A+  K   K V+E K + +    P++  V+SHP Y +MIK+AI +L E+ GSS YAI K++EEK KE LP  FRK+L L L
Subjt:  GEAEVKVPVEDAPSVEVPSAEETKEAEKPVEEKKSRTSREKKPRQSKVASHPPYFQMIKEAITSLNEKNGSSPYAIAKYMEEKHKEVLPANFRKILALQL

Query:  KNSTAKGKLRKVKASYELSEAGKKDKKASKVAKANAEKKTKQARTTRATAGKRKDEAASKAAKAVKKVVAKKPK----RTTPAKPKQPKSIRSPAAKRAK
        K   A GKL KVKAS++L  A  K       A+ +A  K K A T   T  KRK  AASKA    KK +A KPK    +   AK K     R+ AA   +
Subjt:  KNSTAKGKLRKVKASYELSEAGKKDKKASKVAKANAEKKTKQARTTRATAGKRKDEAASKAAKAVKKVVAKKPK----RTTPAKPKQPKSIRSPAAKRAK

Query:  KAV
        KAV
Subjt:  KAV

AT2G18050.1 histone H1-35.4e-2549.12Show/hide
Query:  RTSREKKPRQSKVASHPPYFQMIKEAITSLNEKNGSSPYAIAKYMEEKHKEVLPANFRKILALQLKNSTAKGKLRKVKASYELSEAGK-----KDKKASK
        +T   KKPR+ K  +HPPYFQMIKEA+  L EKNGSSPYAIAK +EEKHK +LP +FRK L+LQLKNS AKGKL K++ASY+LS+  K     +DKK  K
Subjt:  RTSREKKPRQSKVASHPPYFQMIKEAITSLNEKNGSSPYAIAKYMEEKHKEVLPANFRKILALQLKNSTAKGKLRKVKASYELSEAGK-----KDKKASK

Query:  VAKANAEKKTKQARTTRATAGKRKDEAASKAAKAVKKVVAKKPKRTTPAKPKQPKSIRSPAA-KRAKKAVA
          K   ++ TK+ R+           ++++  K V   V K+ K+    K +QPKSI+S    K+A KA A
Subjt:  VAKANAEKKTKQARTTRATAGKRKDEAASKAAKAVKKVVAKKPKRTTPAKPKQPKSIRSPAA-KRAKKAVA

AT2G18050.2 histone H1-38.3e-1848Show/hide
Query:  MIKEAITSLNEKNGSSPYAIAKYMEEKHKEVLPANFRKILALQLKNSTAKGKLRKVKASYELSEAGK-----KDKKASKVAKANAEKKTKQARTTRATAG
        MIKEA+  L EKNGSSPYAIAK +EEKHK +LP +FRK L+LQLKNS AKGKL K++ASY+LS+  K     +DKK  K  K   ++ TK+ R+      
Subjt:  MIKEAITSLNEKNGSSPYAIAKYMEEKHKEVLPANFRKILALQLKNSTAKGKLRKVKASYELSEAGK-----KDKKASKVAKANAEKKTKQARTTRATAG

Query:  KRKDEAASKAAKAVKKVVAKKPKRTTPAKPKQPKSIRSPAA-KRAKKAVA
             ++++  K V   V K+ K+    K +QPKSI+S    K+A KA A
Subjt:  KRKDEAASKAAKAVKKVVAKKPKRTTPAKPKQPKSIRSPAA-KRAKKAVA

AT2G30620.1 winged-helix DNA-binding transcription factor family protein3.4e-1138.64Show/hide
Query:  STGEAEVKVPVEDAPSVEVPSAEETKEAEKPVEEKKSRTSR-EKKP-------RQSKVASHPPYFQMIKEAITSLNEKNGSSPYAIAKYMEEKHKEVLPA
        S  E  V   V+   +     + E K A K  + KK+ T++  KKP       ++   +SHP Y +MIK+AI +L E+ GSS YAI K++EEKHK  LP 
Subjt:  STGEAEVKVPVEDAPSVEVPSAEETKEAEKPVEEKKSRTSR-EKKP-------RQSKVASHPPYFQMIKEAITSLNEKNGSSPYAIAKYMEEKHKEVLPA

Query:  NFRKILALQLKNSTAKGKLRKVKASYEL---------SEAGKKDKKASKVAKANAEKKTKQA-RTTRATAGKRKDEAASKAAKAVKKVVAKKPKRTTPAK
         FRK+L + LK   A  KL KVKAS+++           A    KKA+ VAK   +     A    +A A   K  AA   AKA  KV AK   + T AK
Subjt:  NFRKILALQLKNSTAKGKLRKVKASYEL---------SEAGKKDKKASKVAKANAEKKTKQA-RTTRATAGKRKDEAASKAAKAVKKVVAKKPKRTTPAK

Query:  PKQPKSIRSPAAKRAKKAVA
        PK     +S AA    KAVA
Subjt:  PKQPKSIRSPAAKRAKKAVA

AT2G30620.2 winged-helix DNA-binding transcription factor family protein1.1e-1238.86Show/hide
Query:  STGEAEVKVPVEDAPSVEVPSAEETKEAEKPVEEKKSRTSR-EKKP-------RQSKVASHPPYFQMIKEAITSLNEKNGSSPYAIAKYMEEKHKEVLPA
        S  E  V   V+   +     + E K A K  + KK+ T++  KKP       ++   +SHP Y +MIK+AI +L E+ GSS YAI K++EEKHK  LP 
Subjt:  STGEAEVKVPVEDAPSVEVPSAEETKEAEKPVEEKKSRTSR-EKKP-------RQSKVASHPPYFQMIKEAITSLNEKNGSSPYAIAKYMEEKHKEVLPA

Query:  NFRKILALQLKNSTAKGKLRKVKASYELSEA--GKKDKKASKV-AKANAEKKTKQARTTRATAGKRKDEAASKAAKAVKKVVAKKPKRTTPAK
         FRK+L + LK   A  KL KVKAS+++  A      K A+ V  KA    K K +RT+  T+  +K  A +K     KK  AK  K  +PAK
Subjt:  NFRKILALQLKNSTAKGKLRKVKASYELSEA--GKKDKKASKV-AKANAEKKTKQARTTRATAGKRKDEAASKAAKAVKKVVAKKPKRTTPAK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGTCGACTGGGGAGGCTGAAGTGAAAGTTCCGGTGGAGGATGCTCCTTCTGTGGAGGTTCCGTCTGCGGAGGAGACGAAGGAGGCCGAGAAGCCGGTGGAGGAGAA
GAAATCCAGGACTTCGAGGGAGAAGAAGCCTAGGCAGTCTAAGGTGGCTTCACATCCACCGTACTTTCAGATGATCAAGGAAGCAATCACATCGCTCAACGAGAAGAATG
GATCGAGTCCGTACGCCATAGCCAAATACATGGAGGAGAAACACAAGGAAGTTCTTCCAGCAAATTTCAGGAAAATCTTGGCGCTACAATTGAAGAATTCGACCGCTAAA
GGAAAGTTAAGGAAGGTCAAGGCTTCGTATGAGCTATCCGAAGCAGGAAAGAAAGACAAGAAGGCTTCAAAGGTCGCAAAAGCGAATGCAGAGAAGAAAACCAAACAGGC
AAGAACTACTAGAGCTACTGCAGGGAAGAGGAAGGACGAGGCAGCAAGTAAGGCGGCGAAGGCGGTGAAGAAGGTTGTTGCAAAGAAACCGAAAAGAACTACTCCGGCGA
AGCCAAAGCAGCCGAAATCAATTAGGTCCCCTGCTGCTAAGAGGGCTAAGAAAGCGGTTGCGTGA
mRNA sequenceShow/hide mRNA sequence
GGATTTCGATCTCGTAATAACGACCCGTTTTCCTCCACGTGTGCGCTCCAGATCAATTTTTTTCTACAACTTGGCTATCCATGTCCACTTGAATTGGCCAATCAGAGTTC
GTACTTCCCTCCACATCCAGATTCTTCTTCCCCTATAAATTCCTCGGTGTATTAATTCGTCTCGAGCATATTCGTTAAGCGTTTGGTTCTCGTTCTGTAATTTGTGGAAA
TTTTGATCATGTCGTCGACTGGGGAGGCTGAAGTGAAAGTTCCGGTGGAGGATGCTCCTTCTGTGGAGGTTCCGTCTGCGGAGGAGACGAAGGAGGCCGAGAAGCCGGTG
GAGGAGAAGAAATCCAGGACTTCGAGGGAGAAGAAGCCTAGGCAGTCTAAGGTGGCTTCACATCCACCGTACTTTCAGATGATCAAGGAAGCAATCACATCGCTCAACGA
GAAGAATGGATCGAGTCCGTACGCCATAGCCAAATACATGGAGGAGAAACACAAGGAAGTTCTTCCAGCAAATTTCAGGAAAATCTTGGCGCTACAATTGAAGAATTCGA
CCGCTAAAGGAAAGTTAAGGAAGGTCAAGGCTTCGTATGAGCTATCCGAAGCAGGAAAGAAAGACAAGAAGGCTTCAAAGGTCGCAAAAGCGAATGCAGAGAAGAAAACC
AAACAGGCAAGAACTACTAGAGCTACTGCAGGGAAGAGGAAGGACGAGGCAGCAAGTAAGGCGGCGAAGGCGGTGAAGAAGGTTGTTGCAAAGAAACCGAAAAGAACTAC
TCCGGCGAAGCCAAAGCAGCCGAAATCAATTAGGTCCCCTGCTGCTAAGAGGGCTAAGAAAGCGGTTGCGTGAACGTAGAATCGAACAACTTGTCTTCGATTTCTCTCTT
GTGAATATCTTGCCTCCGAATTACGATCATGTAGTTTGTAAATTCTTGGTTCTATGATCTTGTAGTCTTTGCTTCAACTGCAATGGAAATAAATCCTTTCTTGTTCAGAA
ATTCAATAAACTGAAATAGAAGAAACAGACATTCGCTTCTGGATGTTTCTCTTGCGATTCACACAGATCACCGTCAAAGAACTGGTTGAATCTCAGCCTTTCGATTCGAG
ACACATGGCTCAGGATTGGGGATGAATCAGAGAGAAGAATCTCAATGGAAACCCACAGATTTACATCATTGTGCGTCGCGTCGTTTGATTTGAATCAATCCCATCCGTGG
CCTATGGTTTTGATTTTCTCCCTCCTGATTTAGGATTTTTTTTCTTTAATCCCGAGTCTTTTATGATATCTTT
Protein sequenceShow/hide protein sequence
MSSTGEAEVKVPVEDAPSVEVPSAEETKEAEKPVEEKKSRTSREKKPRQSKVASHPPYFQMIKEAITSLNEKNGSSPYAIAKYMEEKHKEVLPANFRKILALQLKNSTAK
GKLRKVKASYELSEAGKKDKKASKVAKANAEKKTKQARTTRATAGKRKDEAASKAAKAVKKVVAKKPKRTTPAKPKQPKSIRSPAAKRAKKAVA