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Carg00612 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg00612
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionthioredoxin H-type-like
Genome locationCarg_Chr03:5862279..5863272
RNA-Seq ExpressionCarg00612
SyntenyCarg00612
Gene Ontology termsGO:0006662 - glycerol ether metabolic process (biological process)
GO:0015035 - protein disulfide oxidoreductase activity (molecular function)
InterPro domainsIPR013766 - Thioredoxin domain
IPR017937 - Thioredoxin, conserved site
IPR036249 - Thioredoxin-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6603933.1 hypothetical protein SDJN03_04542, partial [Cucurbita argyrosperma subsp. sororia]1.5e-61100Show/hide
Query:  MAVAEGRVIRCNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSVTFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGA
        MAVAEGRVIRCNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSVTFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGA
Subjt:  MAVAEGRVIRCNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSVTFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGA

Query:  KKEELQQTVFKHMAATSSA
        KKEELQQTVFKHMAATSSA
Subjt:  KKEELQQTVFKHMAATSSA

XP_022950147.1 thioredoxin H-type-like [Cucurbita moschata]3.3e-6199.16Show/hide
Query:  MAVAEGRVIRCNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSVTFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGA
        MAVAEGRVIRCNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSVTFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGA
Subjt:  MAVAEGRVIRCNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSVTFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGA

Query:  KKEELQQTVFKHMAATSSA
        +KEELQQTVFKHMAATSSA
Subjt:  KKEELQQTVFKHMAATSSA

XP_022977568.1 thioredoxin H-type [Cucurbita maxima]4.4e-61100Show/hide
Query:  MAVAEGRVIRCNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSVTFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGA
        MAVAEGRVIRCNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSVTFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGA
Subjt:  MAVAEGRVIRCNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSVTFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGA

Query:  KKEELQQTVFKHMAATSS
        KKEELQQTVFKHMAATSS
Subjt:  KKEELQQTVFKHMAATSS

XP_023517738.1 thioredoxin H-type [Cucurbita pepo subsp. pepo]5.0e-5792.37Show/hide
Query:  AVAEGRVIRCNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSVTFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAK
        A AEGRVIRCNTIDSWNHQIQKGNAS+ELIVVDF+ASWCGPCRFI PFL++LAQKFP+VTFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAK
Subjt:  AVAEGRVIRCNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSVTFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAK

Query:  KEELQQTVFKHMAATSSA
        KEELQQTVFKHM+AT+SA
Subjt:  KEELQQTVFKHMAATSSA

XP_023543830.1 thioredoxin H-type-like [Cucurbita pepo subsp. pepo]5.7e-6199.16Show/hide
Query:  MAVAEGRVIRCNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSVTFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGA
        MAVAEGRVI CNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSVTFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGA
Subjt:  MAVAEGRVIRCNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSVTFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGA

Query:  KKEELQQTVFKHMAATSSA
        KKEELQQTVFKHMAATSSA
Subjt:  KKEELQQTVFKHMAATSSA

TrEMBL top hitse value%identityAlignment
A0A6J1BTW6 thioredoxin H-type2.0e-5691.53Show/hide
Query:  MAVAEGRVIRCNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSVTFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGA
        MA +EGRVIRCNT+D+WN QIQKGN SQELIVVDFTASWCGPCRFI PFLDELA K PSVTFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGA
Subjt:  MAVAEGRVIRCNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSVTFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGA

Query:  KKEELQQTVFKHMAATSS
        KKEELQQTVFKHMAAT+S
Subjt:  KKEELQQTVFKHMAATSS

A0A6J1GE02 thioredoxin H-type-like1.6e-6199.16Show/hide
Query:  MAVAEGRVIRCNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSVTFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGA
        MAVAEGRVIRCNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSVTFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGA
Subjt:  MAVAEGRVIRCNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSVTFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGA

Query:  KKEELQQTVFKHMAATSSA
        +KEELQQTVFKHMAATSSA
Subjt:  KKEELQQTVFKHMAATSSA

A0A6J1HER7 thioredoxin H-type2.0e-5691.53Show/hide
Query:  AVAEGRVIRCNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSVTFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAK
        A AEGRVIRCNTIDSWN QIQKGNAS+ELIVVDF+ASWCGPCRFI PFL++LAQKFP+VTFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAK
Subjt:  AVAEGRVIRCNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSVTFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAK

Query:  KEELQQTVFKHMAATSSA
        KEELQQTVFKHM+AT+SA
Subjt:  KEELQQTVFKHMAATSSA

A0A6J1IQD5 thioredoxin H-type2.1e-61100Show/hide
Query:  MAVAEGRVIRCNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSVTFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGA
        MAVAEGRVIRCNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSVTFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGA
Subjt:  MAVAEGRVIRCNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSVTFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGA

Query:  KKEELQQTVFKHMAATSS
        KKEELQQTVFKHMAATSS
Subjt:  KKEELQQTVFKHMAATSS

A0A6J1KSA6 thioredoxin H-type-like isoform X21.3e-5590.68Show/hide
Query:  AVAEGRVIRCNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSVTFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAK
        A AEGRVIRCNTI SWN QIQKGNAS+ELIVVDF+ASWCGPCRFI PFL++LAQKFP+VTFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAK
Subjt:  AVAEGRVIRCNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSVTFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAK

Query:  KEELQQTVFKHMAATSSA
        KEELQQTVFKHM+AT+SA
Subjt:  KEELQQTVFKHMAATSSA

SwissProt top hitse value%identityAlignment
P29448 Thioredoxin H12.3e-4468.42Show/hide
Query:  MAVAEGRVIRCNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSVTFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGA
        MA  EG+VI C+T+++WN Q+QK N S+ L+VVDFTASWCGPCRFIAPF  +LA+K P+V FLKVD D+L+SVA DW ++AMPTFMFLKEG+I+DKVVGA
Subjt:  MAVAEGRVIRCNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSVTFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGA

Query:  KKEELQQTVFKHMA
        KK+ELQ T+ KH+A
Subjt:  KKEELQQTVFKHMA

P29449 Thioredoxin H-type 14.1e-3861.82Show/hide
Query:  EGRVIRCNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSVTFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEE
        EG+V  C+ ++ WN   +KG  +++L+VVDFTASWCGPCRFIAP L ++A+K P V FLKVDVD+L++V+ +W VEAMPTF+F+K+G+ VD+VVGAKKEE
Subjt:  EGRVIRCNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSVTFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEE

Query:  LQQTVFKHMA
        LQQT+ KH A
Subjt:  LQQTVFKHMA

Q07090 Thioredoxin H-type 23.8e-4471.3Show/hide
Query:  EGRVIRCNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSVTFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEE
        EG+VI  +T+D+WN  +QKG   ++LIVVDFTASWCGPC+FIA F  ELA+K P+VTFLKVDVD+L+SVA DW VEAMPTFMFLKEG+IVDKVVGAKK+E
Subjt:  EGRVIRCNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSVTFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEE

Query:  LQQTVFKHMAATSSA
        LQQT+ KH+++TS+A
Subjt:  LQQTVFKHMAATSSA

Q39239 Thioredoxin H44.3e-3557.98Show/hide
Query:  MAVAEGRVIRCNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKF-PSVTFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVG
        MA  EG+VI C+T D W  Q+ K   S +LIV+DFTASWC PCR IAP  ++LA+KF  S  F KVDVD+L+SVAK++GVEAMPTF+F+K G +VDK+VG
Subjt:  MAVAEGRVIRCNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKF-PSVTFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVG

Query:  AKKEELQQTVFKHMAATSS
        A KE+LQ  + KH   T++
Subjt:  AKKEELQQTVFKHMAATSS

Q43636 Thioredoxin H-type2.8e-4772.03Show/hide
Query:  MAVAEGRVIRCNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSVTFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGA
        MA  EG+VI C+T+++WN Q+QKGN ++ LIVVDFTASWCGPCRFIAPFL ELA+K P+VTFLKVDVD+L++VA +W VE+MPTFMFLKEG+I+DKVVGA
Subjt:  MAVAEGRVIRCNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSVTFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGA

Query:  KKEELQQTVFKHMAATSS
        KK+ELQQT+ KHMA  S+
Subjt:  KKEELQQTVFKHMAATSS

Arabidopsis top hitse value%identityAlignment
AT1G19730.1 Thioredoxin superfamily protein3.0e-3657.98Show/hide
Query:  MAVAEGRVIRCNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKF-PSVTFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVG
        MA  EG+VI C+T D W  Q+ K   S +LIV+DFTASWC PCR IAP  ++LA+KF  S  F KVDVD+L+SVAK++GVEAMPTF+F+K G +VDK+VG
Subjt:  MAVAEGRVIRCNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKF-PSVTFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVG

Query:  AKKEELQQTVFKHMAATSS
        A KE+LQ  + KH   T++
Subjt:  AKKEELQQTVFKHMAATSS

AT1G45145.1 thioredoxin H-type 53.0e-3654.78Show/hide
Query:  EGRVIRCNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSVTFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEE
        EG VI C+T++ WN +++  N S++LIV+DFTASWC PCRFIAP   E+A+KF +V F K+DVD+L++VA+++ VEAMPTF+F+KEG I+D+VVGA K+E
Subjt:  EGRVIRCNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSVTFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEE

Query:  LQQTVFKHMAATSSA
        + + + KH    +SA
Subjt:  LQQTVFKHMAATSSA

AT3G51030.1 thioredoxin H-type 11.6e-4568.42Show/hide
Query:  MAVAEGRVIRCNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSVTFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGA
        MA  EG+VI C+T+++WN Q+QK N S+ L+VVDFTASWCGPCRFIAPF  +LA+K P+V FLKVD D+L+SVA DW ++AMPTFMFLKEG+I+DKVVGA
Subjt:  MAVAEGRVIRCNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSVTFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGA

Query:  KKEELQQTVFKHMA
        KK+ELQ T+ KH+A
Subjt:  KKEELQQTVFKHMA

AT5G39950.1 thioredoxin 24.1e-2545.71Show/hide
Query:  RVIRCNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSVTFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQ
        RV++ ++   W     +   S +L+VVDF+ASWCGPCR I P +  +A KF  V F+K+DVD+L  VAK++ V AMPTF+ +K G+ +++++GAKK+EL+
Subjt:  RVIRCNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSVTFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQ

Query:  QTVFK
        + V K
Subjt:  QTVFK

AT5G42980.1 thioredoxin 33.5e-3251.72Show/hide
Query:  AEGRVIRCNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSVTFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKE
        AEG VI C+T++ W  +++  N S++LIV+DFTA+WC PCRFIAP   +LA+K   V F KVDVD+L +VA+++ V+AMPTF+F+KEG I + VVGA KE
Subjt:  AEGRVIRCNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSVTFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKE

Query:  ELQQTVFKHMAATSSA
        E+   + KH    ++A
Subjt:  ELQQTVFKHMAATSSA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGTAGCAGAGGGACGAGTCATCCGCTGCAACACCATTGATTCATGGAACCACCAAATTCAGAAGGGCAATGCCTCTCAGGAACTGATAGTGGTGGATTTCACTGC
ATCATGGTGTGGTCCGTGTCGGTTCATTGCGCCTTTTCTAGACGAGCTTGCTCAGAAATTTCCCAGTGTCACATTTCTCAAGGTTGATGTGGATGATCTGGAGTCGGTAG
CTAAAGATTGGGGGGTGGAGGCAATGCCTACTTTTATGTTCCTGAAAGAGGGAAGAATTGTGGACAAGGTGGTTGGAGCTAAGAAGGAAGAACTGCAGCAGACTGTATTC
AAGCACATGGCTGCTACTTCTTCTGCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGTAGCAGAGGGACGAGTCATCCGCTGCAACACCATTGATTCATGGAACCACCAAATTCAGAAGGGCAATGCCTCTCAGGAACTGATAGTGGTGGATTTCACTGC
ATCATGGTGTGGTCCGTGTCGGTTCATTGCGCCTTTTCTAGACGAGCTTGCTCAGAAATTTCCCAGTGTCACATTTCTCAAGGTTGATGTGGATGATCTGGAGTCGGTAG
CTAAAGATTGGGGGGTGGAGGCAATGCCTACTTTTATGTTCCTGAAAGAGGGAAGAATTGTGGACAAGGTGGTTGGAGCTAAGAAGGAAGAACTGCAGCAGACTGTATTC
AAGCACATGGCTGCTACTTCTTCTGCCTGA
Protein sequenceShow/hide protein sequence
MAVAEGRVIRCNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSVTFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVF
KHMAATSSA