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Carg00625 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg00625
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr03:5921518..5925642
RNA-Seq ExpressionCarg00625
SyntenyCarg00625
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6603948.1 hypothetical protein SDJN03_04557, partial [Cucurbita argyrosperma subsp. sororia]2.6e-24100Show/hide
Query:  ALTMTEQDVIILEVFILRFFCFLLIFYSCKNDTIVDEDLSLNDATKPSIISTLSWCKGRV
        ALTMTEQDVIILEVFILRFFCFLLIFYSCKNDTIVDEDLSLNDATKPSIISTLSWCKGRV
Subjt:  ALTMTEQDVIILEVFILRFFCFLLIFYSCKNDTIVDEDLSLNDATKPSIISTLSWCKGRV
KAG7034126.1 hypothetical protein SDJN02_03853 [Cucurbita argyrosperma subsp. argyrosperma]2.9e-63100Show/hide
Query:  MCLESVEESVLRLLAIAVAAHGINPNILVLYHGEDNALVCTPFVPREKIIFRSLAKSLPKSRSHPNALTMTEQDVIILEVFILRFFCFLLIFYSCKNDTI
        MCLESVEESVLRLLAIAVAAHGINPNILVLYHGEDNALVCTPFVPREKIIFRSLAKSLPKSRSHPNALTMTEQDVIILEVFILRFFCFLLIFYSCKNDTI
Subjt:  MCLESVEESVLRLLAIAVAAHGINPNILVLYHGEDNALVCTPFVPREKIIFRSLAKSLPKSRSHPNALTMTEQDVIILEVFILRFFCFLLIFYSCKNDTI

Query:  VDEDLSLNDATKPSIISTLSWCKGRV
        VDEDLSLNDATKPSIISTLSWCKGRV
Subjt:  VDEDLSLNDATKPSIISTLSWCKGRV
XP_022978578.1 uncharacterized protein LOC111478517 isoform X1 [Cucurbita maxima]6.7e-3669.84Show/hide
Query:  MCLESVEESVLRLLAIAVAAHGINPNILVLYHGEDNALVCTPFVPREKIIFRSLAKSLPKSRSHPNALTMTEQDVIILEVFILRFFCFLLIFYSCKNDTI
        MCLESVEESVLRLLAIAVAAHGINPNIL+LYHG    L+ +  +                       LTMTEQDVIIL+VF+LRFFCFLLIFYSCKNDTI
Subjt:  MCLESVEESVLRLLAIAVAAHGINPNILVLYHGEDNALVCTPFVPREKIIFRSLAKSLPKSRSHPNALTMTEQDVIILEVFILRFFCFLLIFYSCKNDTI

Query:  VDEDLSLNDATKPSIISTLSWCKGRV
        VDEDLSLNDATK SIISTLSW KGRV
Subjt:  VDEDLSLNDATKPSIISTLSWCKGRV
XP_022978579.1 uncharacterized protein LOC111478517 isoform X2 [Cucurbita maxima]9.7e-3569.84Show/hide
Query:  MCLESVEESVLRLLAIAVAAHGINPNILVLYHGEDNALVCTPFVPREKIIFRSLAKSLPKSRSHPNALTMTEQDVIILEVFILRFFCFLLIFYSCKNDTI
        MCLESVEESVLRLLAIAVAAHGINPNIL+LYHG    L+ +  +                       LTMTEQDVIIL+VF+LRFFCFLLIFYSCKNDTI
Subjt:  MCLESVEESVLRLLAIAVAAHGINPNILVLYHGEDNALVCTPFVPREKIIFRSLAKSLPKSRSHPNALTMTEQDVIILEVFILRFFCFLLIFYSCKNDTI

Query:  VDEDLSLNDATKPSIISTLSWCKGRV
        VDEDLSLNDATK SIISTLSW KGRV
Subjt:  VDEDLSLNDATKPSIISTLSWCKGRV
TrEMBL top hitse value%identityAlignment
A0A6J1ITJ3 uncharacterized protein LOC111478517 isoform X13.2e-3669.84Show/hide
Query:  MCLESVEESVLRLLAIAVAAHGINPNILVLYHGEDNALVCTPFVPREKIIFRSLAKSLPKSRSHPNALTMTEQDVIILEVFILRFFCFLLIFYSCKNDTI
        MCLESVEESVLRLLAIAVAAHGINPNIL+LYHG    L+ +  +                       LTMTEQDVIIL+VF+LRFFCFLLIFYSCKNDTI
Subjt:  MCLESVEESVLRLLAIAVAAHGINPNILVLYHGEDNALVCTPFVPREKIIFRSLAKSLPKSRSHPNALTMTEQDVIILEVFILRFFCFLLIFYSCKNDTI

Query:  VDEDLSLNDATKPSIISTLSWCKGRV
        VDEDLSLNDATK SIISTLSW KGRV
Subjt:  VDEDLSLNDATKPSIISTLSWCKGRV
A0A6J1IUF1 uncharacterized protein LOC111478517 isoform X24.7e-3569.84Show/hide
Query:  MCLESVEESVLRLLAIAVAAHGINPNILVLYHGEDNALVCTPFVPREKIIFRSLAKSLPKSRSHPNALTMTEQDVIILEVFILRFFCFLLIFYSCKNDTI
        MCLESVEESVLRLLAIAVAAHGINPNIL+LYHG    L+ +  +                       LTMTEQDVIIL+VF+LRFFCFLLIFYSCKNDTI
Subjt:  MCLESVEESVLRLLAIAVAAHGINPNILVLYHGEDNALVCTPFVPREKIIFRSLAKSLPKSRSHPNALTMTEQDVIILEVFILRFFCFLLIFYSCKNDTI

Query:  VDEDLSLNDATKPSIISTLSWCKGRV
        VDEDLSLNDATK SIISTLSW KGRV
Subjt:  VDEDLSLNDATKPSIISTLSWCKGRV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTCTGGAATCAGTGGAGGAAAGTGTACTCCGTCTACTGGCTATAGCAGTTGCTGCTCATGGGATCAATCCTAATATCTTGGTGCTCTATCATGGAGAAGATAATGC
TTTGGTCTGCACTCCTTTCGTTCCCCGTGAAAAGATAATCTTCAGATCCTTAGCAAAAAGTCTGCCAAAGTCTCGGTCTCATCCTAATGCCTTAACCATGACGGAGCAAG
ATGTTATCATCCTTGAGGTGTTCATTCTTAGGTTTTTCTGCTTCCTCTTAATCTTCTACTCATGTAAGAACGACACAATTGTAGATGAAGATCTTTCTTTGAATGATGCT
ACTAAACCGTCGATTATAAGTACCCTCTCTTGGTGCAAGGGAAGGGTTTGA
mRNA sequenceShow/hide mRNA sequence
CATCGCAATTGCTGATACAAAGCTAGCTTCGATTCATTTACGACGCGGTTCATTCCAACCTGAATTGTTTCTCTCGAGATTTTTGTTTTAAGGTCGAAGTGACGGTTGTT
AATGTTTCTACCCGGCGTCAGAATGGGATCGAGAGTTTGGACGATTTCTTCTTCGTGTCGAGGGAGTATGTTCTCTTTTGCTATGATCTCTCTGAAACCATCTTTCCGAT
GACCGGGGTAAAGCAGTCTTGGTAATGAGTGTTCTTATTAAAGCCCAGAAGGATGGGGTTATTGCTGGAGCTATAGGGCTGCTTTGAGGCAGTGGTGGGACGTCTCTCAT
ATCCTCTGCAATAAAATCTCTTCATATTGGAACACCTAAGCTTATCGTCTCAACGTTTCCTAGTAGTCAGACAGACTCTTATATCTGCACATCCGATCGGATACTTTTCC
CATCTATAGTGGATGTGTCTGGAATCAGTGGAGGAAAGTGTACTCCGTCTACTGGCTATAGCAGTTGCTGCTCATGGGATCAATCCTAATATCTTGGTGCTCTATCATGG
AGAAGATAATGCTTTGGTCTGCACTCCTTTCGTTCCCCGTGAAAAGATAATCTTCAGATCCTTAGCAAAAAGTCTGCCAAAGTCTCGGTCTCATCCTAATGCCTTAACCA
TGACGGAGCAAGATGTTATCATCCTTGAGGTGTTCATTCTTAGGTTTTTCTGCTTCCTCTTAATCTTCTACTCATGTAAGAACGACACAATTGTAGATGAAGATCTTTCT
TTGAATGATGCTACTAAACCGTCGATTATAAGTACCCTCTCTTGGTGCAAGGGAAGGGTTTGACGTGACATGAATGAAAATAGACCACGGAGTCGAGACAGACGGGGAAT
CTAGAGGGAAGCCATTATAGGTGTGCAAAATCAAACCAAACAGATAACCGGATCTTAAGGAGTGCGTGCCAAGTAATAACTCTTGCCTACCCTAGTTTTGTTAAAATATA
TAGAATTTTATATA
Protein sequenceShow/hide protein sequence
MCLESVEESVLRLLAIAVAAHGINPNILVLYHGEDNALVCTPFVPREKIIFRSLAKSLPKSRSHPNALTMTEQDVIILEVFILRFFCFLLIFYSCKNDTIVDEDLSLNDA
TKPSIISTLSWCKGRV