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Carg00681 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg00681
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionPeptidylprolyl isomerase
Genome locationCarg_Chr03:6245353..6246017
RNA-Seq ExpressionCarg00681
SyntenyCarg00681
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6604018.1 hypothetical protein SDJN03_04627, partial [Cucurbita argyrosperma subsp. sororia]4.1e-10100Show/hide
Query:  MPLLENPFASSNYVPSGLGYCFIAMGSDEEVPY
        MPLLENPFASSNYVPSGLGYCFIAMGSDEEVPY
Subjt:  MPLLENPFASSNYVPSGLGYCFIAMGSDEEVPY
KAG7034182.1 Photosynthetic NDH subunit of lumenal location 4, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]1.6e-27100Show/hide
Query:  MPTLRELNTMPLLENPFASSNYVPSGLGYCFIAMGSDEEVPYVFDSSYKRARPLTLRIGVGK
        MPTLRELNTMPLLENPFASSNYVPSGLGYCFIAMGSDEEVPYVFDSSYKRARPLTLRIGVGK
Subjt:  MPTLRELNTMPLLENPFASSNYVPSGLGYCFIAMGSDEEVPYVFDSSYKRARPLTLRIGVGK
XP_008440633.1 PREDICTED: photosynthetic NDH subunit of lumenal location 4, chloroplastic [Cucumis melo]1.4e-1061.9Show/hide
Query:  PFASSNYVPSGLGYCFIAMGSDEEVPY----------------VFDSSYKRARPLTLRIGVGK
        P    NYVPSGLGYC IA+GS EEVPY                VFDSSYKRARPLT+RIGVGK
Subjt:  PFASSNYVPSGLGYCFIAMGSDEEVPY----------------VFDSSYKRARPLTLRIGVGK
XP_022133129.1 photosynthetic NDH subunit of lumenal location 4, chloroplastic [Momordica charantia]2.4e-1059.38Show/hide
Query:  NPFASSNYVPSGLGYCFIAMGSDEEVPY----------------VFDSSYKRARPLTLRIGVGK
        +P    NYVPSGLGYC IA+GS E+VPY                VFDSSYKRARPLT+RIGVGK
Subjt:  NPFASSNYVPSGLGYCFIAMGSDEEVPY----------------VFDSSYKRARPLTLRIGVGK
XP_038882610.1 photosynthetic NDH subunit of lumenal location 4, chloroplastic [Benincasa hispida]4.1e-1060.32Show/hide
Query:  PFASSNYVPSGLGYCFIAMGSDEEVPY----------------VFDSSYKRARPLTLRIGVGK
        P    NY PSGLGYC IA+GS EEVPY                VFDSSYKRARPLT+RIGVGK
Subjt:  PFASSNYVPSGLGYCFIAMGSDEEVPY----------------VFDSSYKRARPLTLRIGVGK
TrEMBL top hitse value%identityAlignment
A0A1S3B1J6 Peptidylprolyl isomerase6.8e-1161.9Show/hide
Query:  PFASSNYVPSGLGYCFIAMGSDEEVPY----------------VFDSSYKRARPLTLRIGVGK
        P    NYVPSGLGYC IA+GS EEVPY                VFDSSYKRARPLT+RIGVGK
Subjt:  PFASSNYVPSGLGYCFIAMGSDEEVPY----------------VFDSSYKRARPLTLRIGVGK
A0A5A7T4H4 Peptidylprolyl isomerase6.8e-1161.9Show/hide
Query:  PFASSNYVPSGLGYCFIAMGSDEEVPY----------------VFDSSYKRARPLTLRIGVGK
        P    NYVPSGLGYC IA+GS EEVPY                VFDSSYKRARPLT+RIGVGK
Subjt:  PFASSNYVPSGLGYCFIAMGSDEEVPY----------------VFDSSYKRARPLTLRIGVGK
A0A6J1BV36 Peptidylprolyl isomerase1.2e-1059.38Show/hide
Query:  NPFASSNYVPSGLGYCFIAMGSDEEVPY----------------VFDSSYKRARPLTLRIGVGK
        +P    NYVPSGLGYC IA+GS E+VPY                VFDSSYKRARPLT+RIGVGK
Subjt:  NPFASSNYVPSGLGYCFIAMGSDEEVPY----------------VFDSSYKRARPLTLRIGVGK
A0A6J1HHY0 Peptidylprolyl isomerase5.7e-1058.73Show/hide
Query:  PFASSNYVPSGLGYCFIAMGSDEEVPY----------------VFDSSYKRARPLTLRIGVGK
        P     YVPSGLGYC +A+GS EEVPY                VFDSSYKRARPLT+RIGVGK
Subjt:  PFASSNYVPSGLGYCFIAMGSDEEVPY----------------VFDSSYKRARPLTLRIGVGK
A0A6J1KSN7 Peptidylprolyl isomerase5.7e-1058.73Show/hide
Query:  PFASSNYVPSGLGYCFIAMGSDEEVPY----------------VFDSSYKRARPLTLRIGVGK
        P     YVPSGLGYC +A+GS EEVPY                VFDSSYKRARPLT+RIGVGK
Subjt:  PFASSNYVPSGLGYCFIAMGSDEEVPY----------------VFDSSYKRARPLTLRIGVGK
SwissProt top hitse value%identityAlignment
Q9SCY3 Photosynthetic NDH subunit of lumenal location 4, chloroplastic2.6e-0743.75Show/hide
Query:  NPFASSNYVPSGLGYCFIAMGSDEEVP----------------YVFDSSYKRARPLTLRIGVGK
        +P    +Y  SGLG+C + +G  +E P                 +FDSSYKRARPLT+RIGVGK
Subjt:  NPFASSNYVPSGLGYCFIAMGSDEEVP----------------YVFDSSYKRARPLTLRIGVGK
Arabidopsis top hitse value%identityAlignment
AT4G39710.1 FK506-binding protein 16-21.8e-0843.75Show/hide
Query:  NPFASSNYVPSGLGYCFIAMGSDEEVP----------------YVFDSSYKRARPLTLRIGVGK
        +P    +Y  SGLG+C + +G  +E P                 +FDSSYKRARPLT+RIGVGK
Subjt:  NPFASSNYVPSGLGYCFIAMGSDEEVP----------------YVFDSSYKRARPLTLRIGVGK
AT4G39710.2 FK506-binding protein 16-21.8e-0843.75Show/hide
Query:  NPFASSNYVPSGLGYCFIAMGSDEEVP----------------YVFDSSYKRARPLTLRIGVGK
        +P    +Y  SGLG+C + +G  +E P                 +FDSSYKRARPLT+RIGVGK
Subjt:  NPFASSNYVPSGLGYCFIAMGSDEEVP----------------YVFDSSYKRARPLTLRIGVGK
AT5G45680.1 FK506-binding protein 133.5e-0435.21Show/hide
Query:  NTMPLLENPFASSNYVPSGLGYCFIAMGSDEEV----------------PYVFDSSYKRARPLTLRIGVGK
        N   L E      +  PSGL +C   +G   E                   VFDSSY R +PLT RIGVG+
Subjt:  NTMPLLENPFASSNYVPSGLGYCFIAMGSDEEV----------------PYVFDSSYKRARPLTLRIGVGK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAACGCTACGAGAATTGAATACTATGCCACTGTTGGAGAACCCCTTTGCGAGTTCCAACTATGTGCCTTCCGGGCTTGGCTATTGCTTCATCGCCATGGGATCCGA
TGAGGAAGTTCCTTATGTGTTTGACAGCAGCTATAAGCGTGCTAGACCTCTCACCTTGCGTATTGGTGTTGGCAAG
mRNA sequenceShow/hide mRNA sequence
CTACTTGGCATCACAGCTGCCATAGCCACCTTCATTTCAACCTCAAAGGCCGAATAGCACAATCTGATCATACTAAAATGGCAACCCCATGAGCCCAAGCTTCCCAAATT
TTCAGCCCCAAATAATCTTCCGCTATTAAACCCACTCCTTCTTCTTCTTCTGTTTCTTGCTGCGTCGGTTATGGCTCTGTCGCCCTTGGATGCCAACGCTACGAGAATTG
AATACTATGCCACTGTTGGAGAACCCCTTTGCGAGTTCCAACTATGTGCCTTCCGGGCTTGGCTATTGCTTCATCGCCATGGGATCCGATGAGGAAGTTCCTTATGTGTT
TGACAGCAGCTATAAGCGTGCTAGACCTCTCACCTTGCGTATTGGTGTTGGCAAG
Protein sequenceShow/hide protein sequence
MPTLRELNTMPLLENPFASSNYVPSGLGYCFIAMGSDEEVPYVFDSSYKRARPLTLRIGVGK