; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg00734 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg00734
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionprotein SKIP34
Genome locationCarg_Chr03:6467689..6467982
RNA-Seq ExpressionCarg00734
SyntenyCarg00734
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6604066.1 Protein SKIP34, partial [Cucurbita argyrosperma subsp. sororia]1.3e-3494.51Show/hide
Query:  RSLFRGSISPNQTSVPGNGGDASVVDNLRDRLAETESRLAQVRAREAALSRLLEEMKRLVSVMEILENYLKRRYSDRQEYVVRLLAPVSRK
        R + RGSISPNQTSVP NGGDASVVDNLR RLAETESRLAQVRAREAALSRLLEEMKRLVSVMEILENYLKRRYSDRQEYVVRLLAPVSRK
Subjt:  RSLFRGSISPNQTSVPGNGGDASVVDNLRDRLAETESRLAQVRAREAALSRLLEEMKRLVSVMEILENYLKRRYSDRQEYVVRLLAPVSRK

KAG7034234.1 Protein SKIP34, partial [Cucurbita argyrosperma subsp. argyrosperma]4.4e-43100Show/hide
Query:  MCNGHHRSLFRGSISPNQTSVPGNGGDASVVDNLRDRLAETESRLAQVRAREAALSRLLEEMKRLVSVMEILENYLKRRYSDRQEYVVRLLAPVSRK
        MCNGHHRSLFRGSISPNQTSVPGNGGDASVVDNLRDRLAETESRLAQVRAREAALSRLLEEMKRLVSVMEILENYLKRRYSDRQEYVVRLLAPVSRK
Subjt:  MCNGHHRSLFRGSISPNQTSVPGNGGDASVVDNLRDRLAETESRLAQVRAREAALSRLLEEMKRLVSVMEILENYLKRRYSDRQEYVVRLLAPVSRK

XP_022950522.1 protein SKIP34 [Cucurbita moschata]2.4e-4197.94Show/hide
Query:  MCNGHHRSLFRGSISPNQTSVPGNGGDASVVDNLRDRLAETESRLAQVRAREAALSRLLEEMKRLVSVMEILENYLKRRYSDRQEYVVRLLAPVSRK
        MCNGHHRSLFRGSISPNQTSVP NGGDASVVDNLR RLAETESRLAQVRAREAALSRLLEEMKRLVSVMEILENYLKRRYSDRQEYVVRLLAPVSRK
Subjt:  MCNGHHRSLFRGSISPNQTSVPGNGGDASVVDNLRDRLAETESRLAQVRAREAALSRLLEEMKRLVSVMEILENYLKRRYSDRQEYVVRLLAPVSRK

XP_022978829.1 protein SKIP34 [Cucurbita maxima]1.2e-3792.78Show/hide
Query:  MCNGHHRSLFRGSISPNQTSVPGNGGDASVVDNLRDRLAETESRLAQVRAREAALSRLLEEMKRLVSVMEILENYLKRRYSDRQEYVVRLLAPVSRK
        MCNGHHRSLFRGSISPNQTSVP N GDASVVDNLR RLAETESRLAQVRAREAALSR+LEEMKRLVSVMEIL+NYLKRRY DRQEYVVRLLAP+SRK
Subjt:  MCNGHHRSLFRGSISPNQTSVPGNGGDASVVDNLRDRLAETESRLAQVRAREAALSRLLEEMKRLVSVMEILENYLKRRYSDRQEYVVRLLAPVSRK

XP_023544310.1 protein SKIP34 [Cucurbita pepo subsp. pepo]9.4e-3893.81Show/hide
Query:  MCNGHHRSLFRGSISPNQTSVPGNGGDASVVDNLRDRLAETESRLAQVRAREAALSRLLEEMKRLVSVMEILENYLKRRYSDRQEYVVRLLAPVSRK
        MCNGHHRSLFRG+ISPNQTSVP N GDASVVDNLR RLAETESRLAQVRAREAALSRLLEEMKRLV VMEILENYLKRRY DRQEYVVRLLAPVSRK
Subjt:  MCNGHHRSLFRGSISPNQTSVPGNGGDASVVDNLRDRLAETESRLAQVRAREAALSRLLEEMKRLVSVMEILENYLKRRYSDRQEYVVRLLAPVSRK

TrEMBL top hitse value%identityAlignment
A0A0A0KIR5 Uncharacterized protein2.0e-3385.57Show/hide
Query:  MCNGHHRSLFRGSISPNQTSVPGNGGDASVVDNLRDRLAETESRLAQVRAREAALSRLLEEMKRLVSVMEILENYLKRRYSDRQEYVVRLLAPVSRK
        MCNGHHR LFRGS+ P QTSVP NG   SVVDNLR RL ETE RLAQVRAREA LSRLLEEMKRLVSVMEILENYLKR+YSDRQEYVVRLL+PVSRK
Subjt:  MCNGHHRSLFRGSISPNQTSVPGNGGDASVVDNLRDRLAETESRLAQVRAREAALSRLLEEMKRLVSVMEILENYLKRRYSDRQEYVVRLLAPVSRK

A0A1S3B1B8 protein SKIP342.6e-3386.6Show/hide
Query:  MCNGHHRSLFRGSISPNQTSVPGNGGDASVVDNLRDRLAETESRLAQVRAREAALSRLLEEMKRLVSVMEILENYLKRRYSDRQEYVVRLLAPVSRK
        MCNGHHR LFRGS  P QTSVP NG  ASVVDNLR RL ETE RLAQVRAREA LSRLLEEMKRLVSVMEILENYLKR+YSDRQEYVVRLL+PVSRK
Subjt:  MCNGHHRSLFRGSISPNQTSVPGNGGDASVVDNLRDRLAETESRLAQVRAREAALSRLLEEMKRLVSVMEILENYLKRRYSDRQEYVVRLLAPVSRK

A0A5D3CN14 Protein SKIP342.6e-3386.6Show/hide
Query:  MCNGHHRSLFRGSISPNQTSVPGNGGDASVVDNLRDRLAETESRLAQVRAREAALSRLLEEMKRLVSVMEILENYLKRRYSDRQEYVVRLLAPVSRK
        MCNGHHR LFRGS  P QTSVP NG  ASVVDNLR RL ETE RLAQVRAREA LSRLLEEMKRLVSVMEILENYLKR+YSDRQEYVVRLL+PVSRK
Subjt:  MCNGHHRSLFRGSISPNQTSVPGNGGDASVVDNLRDRLAETESRLAQVRAREAALSRLLEEMKRLVSVMEILENYLKRRYSDRQEYVVRLLAPVSRK

A0A6J1GF20 protein SKIP341.2e-4197.94Show/hide
Query:  MCNGHHRSLFRGSISPNQTSVPGNGGDASVVDNLRDRLAETESRLAQVRAREAALSRLLEEMKRLVSVMEILENYLKRRYSDRQEYVVRLLAPVSRK
        MCNGHHRSLFRGSISPNQTSVP NGGDASVVDNLR RLAETESRLAQVRAREAALSRLLEEMKRLVSVMEILENYLKRRYSDRQEYVVRLLAPVSRK
Subjt:  MCNGHHRSLFRGSISPNQTSVPGNGGDASVVDNLRDRLAETESRLAQVRAREAALSRLLEEMKRLVSVMEILENYLKRRYSDRQEYVVRLLAPVSRK

A0A6J1IV54 protein SKIP345.9e-3892.78Show/hide
Query:  MCNGHHRSLFRGSISPNQTSVPGNGGDASVVDNLRDRLAETESRLAQVRAREAALSRLLEEMKRLVSVMEILENYLKRRYSDRQEYVVRLLAPVSRK
        MCNGHHRSLFRGSISPNQTSVP N GDASVVDNLR RLAETESRLAQVRAREAALSR+LEEMKRLVSVMEIL+NYLKRRY DRQEYVVRLLAP+SRK
Subjt:  MCNGHHRSLFRGSISPNQTSVPGNGGDASVVDNLRDRLAETESRLAQVRAREAALSRLLEEMKRLVSVMEILENYLKRRYSDRQEYVVRLLAPVSRK

SwissProt top hitse value%identityAlignment
Q8GWU7 Protein SKIP342.3e-1854.64Show/hide
Query:  MCNGHHRSLFRGSISPNQTSVPGNGGDASVVDNLRDRLAETESRLAQVRAREAALSRLLEEMKRLVSVMEILENYLKRRYSDRQEYVVRLLAPVSRK
        MC GH++SL   S    ++    +G D SVVD+LRDRLAETE+RL + RAREA LSR LE MKR VSVMEI+E +L+RR+ ++++ + RL +PVS K
Subjt:  MCNGHHRSLFRGSISPNQTSVPGNGGDASVVDNLRDRLAETESRLAQVRAREAALSRLLEEMKRLVSVMEILENYLKRRYSDRQEYVVRLLAPVSRK

Arabidopsis top hitse value%identityAlignment
AT5G65495.1 unknown protein1.6e-1954.64Show/hide
Query:  MCNGHHRSLFRGSISPNQTSVPGNGGDASVVDNLRDRLAETESRLAQVRAREAALSRLLEEMKRLVSVMEILENYLKRRYSDRQEYVVRLLAPVSRK
        MC GH++SL   S    ++    +G D SVVD+LRDRLAETE+RL + RAREA LSR LE MKR VSVMEI+E +L+RR+ ++++ + RL +PVS K
Subjt:  MCNGHHRSLFRGSISPNQTSVPGNGGDASVVDNLRDRLAETESRLAQVRAREAALSRLLEEMKRLVSVMEILENYLKRRYSDRQEYVVRLLAPVSRK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTAACGGCCACCACCGATCTTTGTTCAGAGGTAGCATTTCTCCTAACCAGACCTCCGTACCGGGAAACGGCGGCGACGCTTCCGTTGTGGACAATCTACGGGATCG
ATTAGCGGAAACAGAGTCGCGGCTGGCTCAAGTTAGGGCTCGAGAGGCGGCACTCAGCCGACTCTTGGAGGAAATGAAACGATTAGTTTCTGTGATGGAGATCCTGGAGA
ACTACCTGAAACGGCGGTACAGCGACCGCCAAGAATATGTGGTTCGTCTCCTCGCCCCTGTATCTCGAAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGTGTAACGGCCACCACCGATCTTTGTTCAGAGGTAGCATTTCTCCTAACCAGACCTCCGTACCGGGAAACGGCGGCGACGCTTCCGTTGTGGACAATCTACGGGATCG
ATTAGCGGAAACAGAGTCGCGGCTGGCTCAAGTTAGGGCTCGAGAGGCGGCACTCAGCCGACTCTTGGAGGAAATGAAACGATTAGTTTCTGTGATGGAGATCCTGGAGA
ACTACCTGAAACGGCGGTACAGCGACCGCCAAGAATATGTGGTTCGTCTCCTCGCCCCTGTATCTCGAAAATAG
Protein sequenceShow/hide protein sequence
MCNGHHRSLFRGSISPNQTSVPGNGGDASVVDNLRDRLAETESRLAQVRAREAALSRLLEEMKRLVSVMEILENYLKRRYSDRQEYVVRLLAPVSRK