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Carg00735 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg00735
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionTPR_REGION domain-containing protein
Genome locationCarg_Chr03:6468906..6469541
RNA-Seq ExpressionCarg00735
SyntenyCarg00735
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR001440 - Tetratricopeptide repeat 1
IPR011990 - Tetratricopeptide-like helical domain superfamily
IPR019734 - Tetratricopeptide repeat


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6604067.1 hypothetical protein SDJN03_04676, partial [Cucurbita argyrosperma subsp. sororia]8.7e-105100Show/hide
Query:  MMSPEAMIQVALFILTAATMLAVRELSKRAFGKVRLKNRAILQSSRHFLEGTHLLARARSTSQQSQSMDYAKKALNEAETALSLSPRDPASHILKALALN
        MMSPEAMIQVALFILTAATMLAVRELSKRAFGKVRLKNRAILQSSRHFLEGTHLLARARSTSQQSQSMDYAKKALNEAETALSLSPRDPASHILKALALN
Subjt:  MMSPEAMIQVALFILTAATMLAVRELSKRAFGKVRLKNRAILQSSRHFLEGTHLLARARSTSQQSQSMDYAKKALNEAETALSLSPRDPASHILKALALN

Query:  HMGHHSSALKSLDVALSPPCLKSLSEKEVAKALVKRAELKIAVNRKRRLDSAVEDLLQAVSLGGDDTKAFCLLGQCYEWKKMKDEARQAFEKALTVDPES
        HMGHHSSALKSLDVALSPPCLKSLSEKEVAKALVKRAELKIAVNRKRRLDSAVEDLLQAVSLGGDDTKAFCLLGQCYEWKKMKDEARQAFEKALTVDPES
Subjt:  HMGHHSSALKSLDVALSPPCLKSLSEKEVAKALVKRAELKIAVNRKRRLDSAVEDLLQAVSLGGDDTKAFCLLGQCYEWKKMKDEARQAFEKALTVDPES

Query:  APAREALGRLN
        APAREALGRLN
Subjt:  APAREALGRLN

XP_022132455.1 uncharacterized protein LOC111005306 [Momordica charantia]4.2e-9188.57Show/hide
Query:  MSPEAMIQVALFILTAATMLAVRELSKRAFGKVRLKNRAILQSSRHFLEGTHLLARARSTSQQSQSMDYAKKALNEAETALSLSPRDPASHILKALALNH
        MSPEAMIQVALFILTAAT+LAVRELSKRAFGKVR KNRAILQSSRHF EGTHLLARARSTSQQSQS DYAKKAL EAETALSLSP+DPASHILKALAL+H
Subjt:  MSPEAMIQVALFILTAATMLAVRELSKRAFGKVRLKNRAILQSSRHFLEGTHLLARARSTSQQSQSMDYAKKALNEAETALSLSPRDPASHILKALALNH

Query:  MGHHSSALKSLDVALSPPCLKSLSEKEVAKALVKRAELKIAVNRKRRLDSAVEDLLQAVSLGGDDTKAFCLLGQCYEWKKMKDEARQAFEKALTVDPESA
        MGH SSALKSLDVALSPPCLKSLS +E+ KAL+KRAELKIAVNRKRRLDSAVEDLL+AV LG  D K FCLLGQCYEWK+MKDEA+QAFEKALTVDPES+
Subjt:  MGHHSSALKSLDVALSPPCLKSLSEKEVAKALVKRAELKIAVNRKRRLDSAVEDLLQAVSLGGDDTKAFCLLGQCYEWKKMKDEARQAFEKALTVDPESA

Query:  PAREALGRLN
        PARE L RLN
Subjt:  PAREALGRLN

XP_022950520.1 uncharacterized protein LOC111453603 [Cucurbita moschata]8.7e-105100Show/hide
Query:  MMSPEAMIQVALFILTAATMLAVRELSKRAFGKVRLKNRAILQSSRHFLEGTHLLARARSTSQQSQSMDYAKKALNEAETALSLSPRDPASHILKALALN
        MMSPEAMIQVALFILTAATMLAVRELSKRAFGKVRLKNRAILQSSRHFLEGTHLLARARSTSQQSQSMDYAKKALNEAETALSLSPRDPASHILKALALN
Subjt:  MMSPEAMIQVALFILTAATMLAVRELSKRAFGKVRLKNRAILQSSRHFLEGTHLLARARSTSQQSQSMDYAKKALNEAETALSLSPRDPASHILKALALN

Query:  HMGHHSSALKSLDVALSPPCLKSLSEKEVAKALVKRAELKIAVNRKRRLDSAVEDLLQAVSLGGDDTKAFCLLGQCYEWKKMKDEARQAFEKALTVDPES
        HMGHHSSALKSLDVALSPPCLKSLSEKEVAKALVKRAELKIAVNRKRRLDSAVEDLLQAVSLGGDDTKAFCLLGQCYEWKKMKDEARQAFEKALTVDPES
Subjt:  HMGHHSSALKSLDVALSPPCLKSLSEKEVAKALVKRAELKIAVNRKRRLDSAVEDLLQAVSLGGDDTKAFCLLGQCYEWKKMKDEARQAFEKALTVDPES

Query:  APAREALGRLN
        APAREALGRLN
Subjt:  APAREALGRLN

XP_022978825.1 uncharacterized protein LOC111478668 [Cucurbita maxima]3.7e-10398.1Show/hide
Query:  MMSPEAMIQVALFILTAATMLAVRELSKRAFGKVRLKNRAILQSSRHFLEGTHLLARARSTSQQSQSMDYAKKALNEAETALSLSPRDPASHILKALALN
        MMSPEA+IQVALFILTAATMLAVRELSKRAFGKVRLKNRAILQSSRHFLEGTHLLARARS SQQSQSMDYAKKA+NEAETALSLSPRDPASHILKALALN
Subjt:  MMSPEAMIQVALFILTAATMLAVRELSKRAFGKVRLKNRAILQSSRHFLEGTHLLARARSTSQQSQSMDYAKKALNEAETALSLSPRDPASHILKALALN

Query:  HMGHHSSALKSLDVALSPPCLKSLSEKEVAKALVKRAELKIAVNRKRRLDSAVEDLLQAVSLGGDDTKAFCLLGQCYEWKKMKDEARQAFEKALTVDPES
        HMGHHSSALKSLD+ALSPPCLKSLSEKEVAKALVKRAELKIAVNRKRRLDSAVEDLLQAVSLGGDDTKAFCLLGQCYEWKKMKDEARQAFEKALTVDPES
Subjt:  HMGHHSSALKSLDVALSPPCLKSLSEKEVAKALVKRAELKIAVNRKRRLDSAVEDLLQAVSLGGDDTKAFCLLGQCYEWKKMKDEARQAFEKALTVDPES

Query:  APAREALGRLN
        APAREALGRLN
Subjt:  APAREALGRLN

XP_023543662.1 uncharacterized protein LOC111803474 [Cucurbita pepo subsp. pepo]4.8e-10398.58Show/hide
Query:  MMSPEAMIQVALFILTAATMLAVRELSKRAFGKVRLKNRAILQSSRHFLEGTHLLARARSTSQQSQSMDYAKKALNEAETALSLSPRDPASHILKALALN
        M+SPEAMIQVALFILTAATMLAVRELSKRAFGKVRLKNRAILQSSRHFLEGTHLLARARSTSQQSQSMDYAKKALNEAETALSLSPRDPASHILKALALN
Subjt:  MMSPEAMIQVALFILTAATMLAVRELSKRAFGKVRLKNRAILQSSRHFLEGTHLLARARSTSQQSQSMDYAKKALNEAETALSLSPRDPASHILKALALN

Query:  HMGHHSSALKSLDVALSPPCLKSLSEKEVAKALVKRAELKIAVNRKRRLDSAVEDLLQAVSLGGDDTKAFCLLGQCYEWKKMKDEARQAFEKALTVDPES
        HMGH SSALKSLDVALSPPCLKSLSEKEVAKALVKRAELKIAVNRKRRLDSAVEDLLQAVSLGGDDTKAFCLLGQCYEWKKMKDEAR+AFEKALTVDPES
Subjt:  HMGHHSSALKSLDVALSPPCLKSLSEKEVAKALVKRAELKIAVNRKRRLDSAVEDLLQAVSLGGDDTKAFCLLGQCYEWKKMKDEARQAFEKALTVDPES

Query:  APAREALGRLN
        APAREALGRLN
Subjt:  APAREALGRLN

TrEMBL top hitse value%identityAlignment
A0A5E4EZ55 PREDICTED4.4e-6262.74Show/hide
Query:  MSPEAMIQVALFILTAATMLAVRELSKRAFGKVRLKNRAILQSSRHFLEGTHLLARARSTSQQSQSMDYAKKALNEAETALSLSPRDPASHILKALALNH
        M+PE ++Q+ L ILT A   A+ ++S++A  K+R  NRA LQS+RHF++G+HLL RARS   ++QS  +AK AL EAE AL+LSPRDP  HILKALAL+ 
Subjt:  MSPEAMIQVALFILTAATMLAVRELSKRAFGKVRLKNRAILQSSRHFLEGTHLLARARSTSQQSQSMDYAKKALNEAETALSLSPRDPASHILKALALNH

Query:  MGHHSSALKSLDVALSPPCLKSLSEKEVAKALVKRAELKIAVNRKRRLDSAVEDLLQAVSLG---GDDTKAFCLLGQCYEWKKMKDEARQAFEKALTVDP
        +GH +SALKS DVALSPPC+KSLSE+E  +ALVKRAELKI +NR+RR+DSAVEDL+QAV L    GDD  +FCLLGQCYEWK MK+EAR+AFE+AL  +P
Subjt:  MGHHSSALKSLDVALSPPCLKSLSEKEVAKALVKRAELKIAVNRKRRLDSAVEDLLQAVSLG---GDDTKAFCLLGQCYEWKKMKDEARQAFEKALTVDP

Query:  ESAPAREALGRL
         S  AR+ L RL
Subjt:  ESAPAREALGRL

A0A6J1BSI1 uncharacterized protein LOC1110053062.0e-9188.57Show/hide
Query:  MSPEAMIQVALFILTAATMLAVRELSKRAFGKVRLKNRAILQSSRHFLEGTHLLARARSTSQQSQSMDYAKKALNEAETALSLSPRDPASHILKALALNH
        MSPEAMIQVALFILTAAT+LAVRELSKRAFGKVR KNRAILQSSRHF EGTHLLARARSTSQQSQS DYAKKAL EAETALSLSP+DPASHILKALAL+H
Subjt:  MSPEAMIQVALFILTAATMLAVRELSKRAFGKVRLKNRAILQSSRHFLEGTHLLARARSTSQQSQSMDYAKKALNEAETALSLSPRDPASHILKALALNH

Query:  MGHHSSALKSLDVALSPPCLKSLSEKEVAKALVKRAELKIAVNRKRRLDSAVEDLLQAVSLGGDDTKAFCLLGQCYEWKKMKDEARQAFEKALTVDPESA
        MGH SSALKSLDVALSPPCLKSLS +E+ KAL+KRAELKIAVNRKRRLDSAVEDLL+AV LG  D K FCLLGQCYEWK+MKDEA+QAFEKALTVDPES+
Subjt:  MGHHSSALKSLDVALSPPCLKSLSEKEVAKALVKRAELKIAVNRKRRLDSAVEDLLQAVSLGGDDTKAFCLLGQCYEWKKMKDEARQAFEKALTVDPESA

Query:  PAREALGRLN
        PARE L RLN
Subjt:  PAREALGRLN

A0A6J1GFZ7 uncharacterized protein LOC1114536034.2e-105100Show/hide
Query:  MMSPEAMIQVALFILTAATMLAVRELSKRAFGKVRLKNRAILQSSRHFLEGTHLLARARSTSQQSQSMDYAKKALNEAETALSLSPRDPASHILKALALN
        MMSPEAMIQVALFILTAATMLAVRELSKRAFGKVRLKNRAILQSSRHFLEGTHLLARARSTSQQSQSMDYAKKALNEAETALSLSPRDPASHILKALALN
Subjt:  MMSPEAMIQVALFILTAATMLAVRELSKRAFGKVRLKNRAILQSSRHFLEGTHLLARARSTSQQSQSMDYAKKALNEAETALSLSPRDPASHILKALALN

Query:  HMGHHSSALKSLDVALSPPCLKSLSEKEVAKALVKRAELKIAVNRKRRLDSAVEDLLQAVSLGGDDTKAFCLLGQCYEWKKMKDEARQAFEKALTVDPES
        HMGHHSSALKSLDVALSPPCLKSLSEKEVAKALVKRAELKIAVNRKRRLDSAVEDLLQAVSLGGDDTKAFCLLGQCYEWKKMKDEARQAFEKALTVDPES
Subjt:  HMGHHSSALKSLDVALSPPCLKSLSEKEVAKALVKRAELKIAVNRKRRLDSAVEDLLQAVSLGGDDTKAFCLLGQCYEWKKMKDEARQAFEKALTVDPES

Query:  APAREALGRLN
        APAREALGRLN
Subjt:  APAREALGRLN

A0A6J1IRB2 uncharacterized protein LOC1114786681.8e-10398.1Show/hide
Query:  MMSPEAMIQVALFILTAATMLAVRELSKRAFGKVRLKNRAILQSSRHFLEGTHLLARARSTSQQSQSMDYAKKALNEAETALSLSPRDPASHILKALALN
        MMSPEA+IQVALFILTAATMLAVRELSKRAFGKVRLKNRAILQSSRHFLEGTHLLARARS SQQSQSMDYAKKA+NEAETALSLSPRDPASHILKALALN
Subjt:  MMSPEAMIQVALFILTAATMLAVRELSKRAFGKVRLKNRAILQSSRHFLEGTHLLARARSTSQQSQSMDYAKKALNEAETALSLSPRDPASHILKALALN

Query:  HMGHHSSALKSLDVALSPPCLKSLSEKEVAKALVKRAELKIAVNRKRRLDSAVEDLLQAVSLGGDDTKAFCLLGQCYEWKKMKDEARQAFEKALTVDPES
        HMGHHSSALKSLD+ALSPPCLKSLSEKEVAKALVKRAELKIAVNRKRRLDSAVEDLLQAVSLGGDDTKAFCLLGQCYEWKKMKDEARQAFEKALTVDPES
Subjt:  HMGHHSSALKSLDVALSPPCLKSLSEKEVAKALVKRAELKIAVNRKRRLDSAVEDLLQAVSLGGDDTKAFCLLGQCYEWKKMKDEARQAFEKALTVDPES

Query:  APAREALGRLN
        APAREALGRLN
Subjt:  APAREALGRLN

A0A6J5V4N0 TPR_REGION domain-containing protein1.2e-6263.21Show/hide
Query:  MSPEAMIQVALFILTAATMLAVRELSKRAFGKVRLKNRAILQSSRHFLEGTHLLARARSTSQQSQSMDYAKKALNEAETALSLSPRDPASHILKALALNH
        M+PE ++Q+ L ILT A   A+ ++S++A  K+R  NRA LQS+RHF++G+HLL RARS   ++QS  +AK AL EAE AL+LSPRDP  HILKALAL+ 
Subjt:  MSPEAMIQVALFILTAATMLAVRELSKRAFGKVRLKNRAILQSSRHFLEGTHLLARARSTSQQSQSMDYAKKALNEAETALSLSPRDPASHILKALALNH

Query:  MGHHSSALKSLDVALSPPCLKSLSEKEVAKALVKRAELKIAVNRKRRLDSAVEDLLQAVSLG---GDDTKAFCLLGQCYEWKKMKDEARQAFEKALTVDP
        +GH +SALKS DVALSPPC+KSLSE+E  +ALVKRAELKI +NR+RR+DSAVEDL+QAVSL    GDD  +FCLLGQCYEWK MK+EAR+AFE+AL  +P
Subjt:  MGHHSSALKSLDVALSPPCLKSLSEKEVAKALVKRAELKIAVNRKRRLDSAVEDLLQAVSLG---GDDTKAFCLLGQCYEWKKMKDEARQAFEKALTVDP

Query:  ESAPAREALGRL
         S  AR+ L RL
Subjt:  ESAPAREALGRL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G65520.1 Tetratricopeptide repeat (TPR)-like superfamily protein2.0e-4652.48Show/hide
Query:  MMSPEAMIQVALFILTAATMLAVRELSKRAFGKVRLKNRAILQSSRHFLEGTHLLARARSTSQQSQSMDYAKKALNEAETALSLSPRDPASHILKALALN
        M + E +IQ A+ +LT     A++ LS+R   K R K+RA LQ+ R  ++ + LLARAR+T ++SQS   AK AL EA+  +++SP D A HI++ALAL+
Subjt:  MMSPEAMIQVALFILTAATMLAVRELSKRAFGKVRLKNRAILQSSRHFLEGTHLLARARSTSQQSQSMDYAKKALNEAETALSLSPRDPASHILKALALN

Query:  HMGHHSSALKSLDVALSPPCLKSLSEKEVAKALVKRAELKIAVNRKRRLDSAVEDLLQAVSL--GGDDTKAFCLLGQCYEWKKMKDEARQAFEKALTVDP
         +GHH+SALKS D+AL+ P LKSLS  E A ALVKRAE+K+AVNR+RR+DSAVEDL +AV L  G D  + F LLG+CYE+K +K++A+ AF +AL   P
Subjt:  HMGHHSSALKSLDVALSPPCLKSLSEKEVAKALVKRAELKIAVNRKRRLDSAVEDLLQAVSL--GGDDTKAFCLLGQCYEWKKMKDEARQAFEKALTVDP

Query:  ES
         S
Subjt:  ES


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGTCGCCGGAAGCCATGATACAAGTAGCCCTCTTCATTCTCACAGCAGCGACGATGTTAGCCGTACGAGAACTTTCCAAGCGAGCTTTCGGCAAGGTCCGCCTGAA
GAACAGAGCGATCCTCCAATCCAGTCGCCACTTCCTCGAGGGAACTCATCTACTCGCTCGAGCACGATCTACTTCTCAACAATCTCAATCGATGGACTACGCGAAGAAGG
CACTAAACGAGGCCGAAACGGCGCTCTCGCTTTCGCCTAGAGATCCGGCATCGCACATCTTGAAAGCCCTAGCCTTAAATCACATGGGTCACCACAGCTCCGCACTTAAA
TCTCTCGACGTCGCACTTTCGCCGCCGTGCTTGAAGTCATTATCCGAAAAAGAGGTCGCTAAGGCGTTGGTCAAGAGAGCCGAATTGAAAATAGCCGTCAATCGGAAACG
ACGACTCGACTCGGCGGTGGAAGACTTGCTGCAGGCGGTGAGTTTGGGCGGAGATGACACGAAGGCCTTCTGTTTGTTGGGCCAATGTTACGAATGGAAGAAAATGAAAG
ATGAGGCCAGACAGGCTTTTGAGAAGGCCTTAACTGTAGATCCTGAATCAGCCCCGGCTCGCGAGGCATTGGGCCGACTGAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGATGTCGCCGGAAGCCATGATACAAGTAGCCCTCTTCATTCTCACAGCAGCGACGATGTTAGCCGTACGAGAACTTTCCAAGCGAGCTTTCGGCAAGGTCCGCCTGAA
GAACAGAGCGATCCTCCAATCCAGTCGCCACTTCCTCGAGGGAACTCATCTACTCGCTCGAGCACGATCTACTTCTCAACAATCTCAATCGATGGACTACGCGAAGAAGG
CACTAAACGAGGCCGAAACGGCGCTCTCGCTTTCGCCTAGAGATCCGGCATCGCACATCTTGAAAGCCCTAGCCTTAAATCACATGGGTCACCACAGCTCCGCACTTAAA
TCTCTCGACGTCGCACTTTCGCCGCCGTGCTTGAAGTCATTATCCGAAAAAGAGGTCGCTAAGGCGTTGGTCAAGAGAGCCGAATTGAAAATAGCCGTCAATCGGAAACG
ACGACTCGACTCGGCGGTGGAAGACTTGCTGCAGGCGGTGAGTTTGGGCGGAGATGACACGAAGGCCTTCTGTTTGTTGGGCCAATGTTACGAATGGAAGAAAATGAAAG
ATGAGGCCAGACAGGCTTTTGAGAAGGCCTTAACTGTAGATCCTGAATCAGCCCCGGCTCGCGAGGCATTGGGCCGACTGAATTAA
Protein sequenceShow/hide protein sequence
MMSPEAMIQVALFILTAATMLAVRELSKRAFGKVRLKNRAILQSSRHFLEGTHLLARARSTSQQSQSMDYAKKALNEAETALSLSPRDPASHILKALALNHMGHHSSALK
SLDVALSPPCLKSLSEKEVAKALVKRAELKIAVNRKRRLDSAVEDLLQAVSLGGDDTKAFCLLGQCYEWKKMKDEARQAFEKALTVDPESAPAREALGRLN