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Carg00755 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg00755
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionTubulin alpha chain-like isoform X2
Genome locationCarg_Chr03:6570801..6571866
RNA-Seq ExpressionCarg00755
SyntenyCarg00755
Gene Ontology termsGO:0005622 - intracellular (cellular component)
GO:0003824 - catalytic activity (molecular function)
GO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB1256461.1 hypothetical protein Cadr_000027387 [Camelus dromedarius]2.9e-0955.88Show/hide
Query:  IFLATNELFRVEELAVRPSPDFINDCWLKIYKNSTRYMFSSTSLTEESVEGVITPTNCLVARHLSIGL
        IF A +EL RVEELAV  S +FIN C   +Y++   +M +ST LTEE VEGVI+  N LV  HL+IGL
Subjt:  IFLATNELFRVEELAVRPSPDFINDCWLKIYKNSTRYMFSSTSLTEESVEGVITPTNCLVARHLSIGL

KAB1267139.1 hypothetical protein Cadr_000017993 [Camelus dromedarius]8.5e-0948.61Show/hide
Query:  IVRCIFLATNELFRVEELAVRPSPDFINDCWLKIYKNSTRYMFSSTSLTEESVEGVITPTNCLVARHLSIGL
        ++  IF A + L RVEEL V  S +FINDC  ++Y++   +M +S  LTEE VEGV++  N LV  HL+IGL
Subjt:  IVRCIFLATNELFRVEELAVRPSPDFINDCWLKIYKNSTRYMFSSTSLTEESVEGVITPTNCLVARHLSIGL

KAF4533311.1 hypothetical protein B566_EDAN004432 [Ephemera danica]1.1e-0834.59Show/hide
Query:  SKIVRCIFLATNELFRVEELAVRPSPDFINDCWLKIYKNSTRYMFSSTSLTEESVEGVITPTNCLVARHLSIGLQGRQVRDIQISVVHICKFHSNLHFTT
        S +V  IFLA ++L RVE+LAV  S   I    L++ ++S+RYMF+   LTEE VE VI   N LV  HL+IGL      D  +  V +    ++L+   
Subjt:  SKIVRCIFLATNELFRVEELAVRPSPDFINDCWLKIYKNSTRYMFSSTSLTEESVEGVITPTNCLVARHLSIGLQGRQVRDIQISVVHICKFHSNLHFTT

Query:  INGNRDTFTDQINTFTPPPIHNTFEYERNHATKICDDLDRSSRWGSRKLISKRNVVDLL
         N + D FT Q         HN  +         C     ++R GS   +S+R+   LL
Subjt:  INGNRDTFTDQINTFTPPPIHNTFEYERNHATKICDDLDRSSRWGSRKLISKRNVVDLL

KAG7034255.1 hypothetical protein SDJN02_03982, partial [Cucurbita argyrosperma subsp. argyrosperma]1.0e-110100Show/hide
Query:  ATSKIVRCIFLATNELFRVEELAVRPSPDFINDCWLKIYKNSTRYMFSSTSLTEESVEGVITPTNCLVARHLSIGLQGRQVRDIQISVVHICKFHSNLHF
        ATSKIVRCIFLATNELFRVEELAVRPSPDFINDCWLKIYKNSTRYMFSSTSLTEESVEGVITPTNCLVARHLSIGLQGRQVRDIQISVVHICKFHSNLHF
Subjt:  ATSKIVRCIFLATNELFRVEELAVRPSPDFINDCWLKIYKNSTRYMFSSTSLTEESVEGVITPTNCLVARHLSIGLQGRQVRDIQISVVHICKFHSNLHF

Query:  TTINGNRDTFTDQINTFTPPPIHNTFEYERNHATKICDDLDRSSRWGSRKLISKRNVVDLLRSGTLTYSPVKTSVTPIRIQKNTRSGNCDKLTQQNPRSQ
        TTINGNRDTFTDQINTFTPPPIHNTFEYERNHATKICDDLDRSSRWGSRKLISKRNVVDLLRSGTLTYSPVKTSVTPIRIQKNTRSGNCDKLTQQNPRSQ
Subjt:  TTINGNRDTFTDQINTFTPPPIHNTFEYERNHATKICDDLDRSSRWGSRKLISKRNVVDLLRSGTLTYSPVKTSVTPIRIQKNTRSGNCDKLTQQNPRSQ

Query:  H
        H
Subjt:  H

OQS04464.1 hypothetical protein THRCLA_03304 [Thraustotheca clavata]7.7e-1053.33Show/hide
Query:  TSKIVRCIFLATNELFRVEELAVRPSPDFINDCWLKIYKNSTRYMFSSTSLTEESVEGVITPTNCLVARHLSIGL
        TS +V  IFLA N LFR+ +L V  S DFI   W +I K+STR +F+STS  EE V+G+IT T+ LV  HL+I L
Subjt:  TSKIVRCIFLATNELFRVEELAVRPSPDFINDCWLKIYKNSTRYMFSSTSLTEESVEGVITPTNCLVARHLSIGL

TrEMBL top hitse value%identityAlignment
A0A1L8E9Q7 Putative secreted protein (Fragment)5.8e-1142.73Show/hide
Query:  TSKIVRCIFLATNELFRVEELAVRPSPDFINDCWLKIYKNSTRYMFSSTSLTEESVEGVITPTNCLVARHLSIGLQGRQVRDIQISVVHICKFHSNLHFT
        T  +V  IFLA+N+LFRVE+LAV  S  FI +   +IY++ST  +F+S S  EE VE +IT T+ L+ RHL+I L      D     V      +NL  +
Subjt:  TSKIVRCIFLATNELFRVEELAVRPSPDFINDCWLKIYKNSTRYMFSSTSLTEESVEGVITPTNCLVARHLSIGLQGRQVRDIQISVVHICKFHSNLHFT

Query:  TINGNRDTFT
          + +RDTFT
Subjt:  TINGNRDTFT

A0A1L8E9Z8 Putative secreted protein (Fragment)7.5e-1141.82Show/hide
Query:  TSKIVRCIFLATNELFRVEELAVRPSPDFINDCWLKIYKNSTRYMFSSTSLTEESVEGVITPTNCLVARHLSIGLQGRQVRDIQISVVHICKFHSNLHFT
        T  +V  +FLA+N+LFRVE+LAV  S  FI +   +IY++ST  +F+S S  EE VE +IT T+ L+ RHL+I L      D     V      +NL  +
Subjt:  TSKIVRCIFLATNELFRVEELAVRPSPDFINDCWLKIYKNSTRYMFSSTSLTEESVEGVITPTNCLVARHLSIGLQGRQVRDIQISVVHICKFHSNLHFT

Query:  TINGNRDTFT
          + +RDTFT
Subjt:  TINGNRDTFT

A0A1L8EA02 Uncharacterized protein (Fragment)1.2e-1144.55Show/hide
Query:  TSKIVRCIFLATNELFRVEELAVRPSPDFINDCWLKIYKNSTRYMFSSTSLTEESVEGVITPTNCLVARHLSIGLQGRQVRDIQISVVHICKFHSNLHFT
        T  +V  IFLA+N+LFRVE+LAV  S  FI +   +IY++ST  +F+S S TEE VE VIT T+ L+ RHL+I L      D     V      +NL  +
Subjt:  TSKIVRCIFLATNELFRVEELAVRPSPDFINDCWLKIYKNSTRYMFSSTSLTEESVEGVITPTNCLVARHLSIGLQGRQVRDIQISVVHICKFHSNLHFT

Query:  TINGNRDTFT
          + +RDTFT
Subjt:  TINGNRDTFT

A0A1L8EA13 Putative secreted protein (Fragment)1.2e-1144.55Show/hide
Query:  TSKIVRCIFLATNELFRVEELAVRPSPDFINDCWLKIYKNSTRYMFSSTSLTEESVEGVITPTNCLVARHLSIGLQGRQVRDIQISVVHICKFHSNLHFT
        T  +V  IFLA+N+LFRVE+LAV  S  FI +   +IY++ST  +F+S S TEE VE VIT T+ L+ RHL+I L      D     V      +NL  +
Subjt:  TSKIVRCIFLATNELFRVEELAVRPSPDFINDCWLKIYKNSTRYMFSSTSLTEESVEGVITPTNCLVARHLSIGLQGRQVRDIQISVVHICKFHSNLHFT

Query:  TINGNRDTFT
          + +RDTFT
Subjt:  TINGNRDTFT

A0A1L8EA42 Uncharacterized protein (Fragment)1.2e-1144.55Show/hide
Query:  TSKIVRCIFLATNELFRVEELAVRPSPDFINDCWLKIYKNSTRYMFSSTSLTEESVEGVITPTNCLVARHLSIGLQGRQVRDIQISVVHICKFHSNLHFT
        T  +V  IFLA+N+LFRVE+LAV  S  FI +   +IY++ST  +F+S S TEE VE VIT T+ L+ RHL+I L      D     V      +NL  +
Subjt:  TSKIVRCIFLATNELFRVEELAVRPSPDFINDCWLKIYKNSTRYMFSSTSLTEESVEGVITPTNCLVARHLSIGLQGRQVRDIQISVVHICKFHSNLHFT

Query:  TINGNRDTFT
          + +RDTFT
Subjt:  TINGNRDTFT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GCCACGAGCAAAATTGTTCGCTGCATCTTCCTTGCCACTAATGAGCTGTTCAGGGTGGAAGAGTTGGCGGTACGTCCCAGTCCTGACTTCATCAATGACTGTTGGCTCAA
GATCTACAAAAACAGCACGAGGTACATGTTTTCCAGCACCAGTCTCACTGAAGAAAGTGTTGAAGGCGTCATCACCCCCACCAACTGTCTTGTCGCTAGGCATCTGTCCA
TCGGGCTGCAAGGGAGACAGGTAAGAGACATTCAGATTTCAGTAGTACACATTTGCAAGTTTCATAGTAATTTACATTTCACAACTATAAATGGAAATAGAGACACGTTT
ACAGATCAGATCAACACTTTCACACCCCCACCAATTCACAACACATTCGAATATGAAAGAAACCACGCAACCAAAATATGCGACGACCTGGACAGAAGTTCAAGGTGGGG
TTCGAGGAAGTTGATATCAAAACGAAATGTAGTCGATCTACTTAGATCAGGCACGTTGACGTATTCTCCAGTTAAAACCTCTGTTACACCTATTAGGATACAAAAGAATA
CTAGATCTGGAAACTGCGATAAACTCACACAACAAAACCCTAGATCTCAACAT
mRNA sequenceShow/hide mRNA sequence
GCCACGAGCAAAATTGTTCGCTGCATCTTCCTTGCCACTAATGAGCTGTTCAGGGTGGAAGAGTTGGCGGTACGTCCCAGTCCTGACTTCATCAATGACTGTTGGCTCAA
GATCTACAAAAACAGCACGAGGTACATGTTTTCCAGCACCAGTCTCACTGAAGAAAGTGTTGAAGGCGTCATCACCCCCACCAACTGTCTTGTCGCTAGGCATCTGTCCA
TCGGGCTGCAAGGGAGACAGGTAAGAGACATTCAGATTTCAGTAGTACACATTTGCAAGTTTCATAGTAATTTACATTTCACAACTATAAATGGAAATAGAGACACGTTT
ACAGATCAGATCAACACTTTCACACCCCCACCAATTCACAACACATTCGAATATGAAAGAAACCACGCAACCAAAATATGCGACGACCTGGACAGAAGTTCAAGGTGGGG
TTCGAGGAAGTTGATATCAAAACGAAATGTAGTCGATCTACTTAGATCAGGCACGTTGACGTATTCTCCAGTTAAAACCTCTGTTACACCTATTAGGATACAAAAGAATA
CTAGATCTGGAAACTGCGATAAACTCACACAACAAAACCCTAGATCTCAACAT
Protein sequenceShow/hide protein sequence
ATSKIVRCIFLATNELFRVEELAVRPSPDFINDCWLKIYKNSTRYMFSSTSLTEESVEGVITPTNCLVARHLSIGLQGRQVRDIQISVVHICKFHSNLHFTTINGNRDTF
TDQINTFTPPPIHNTFEYERNHATKICDDLDRSSRWGSRKLISKRNVVDLLRSGTLTYSPVKTSVTPIRIQKNTRSGNCDKLTQQNPRSQH