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Carg00760 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg00760
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionEpidermal patterning factor-like protein
Genome locationCarg_Chr03:6589597..6590921
RNA-Seq ExpressionCarg00760
SyntenyCarg00760
Gene Ontology termsGO:0010052 - guard cell differentiation (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR039455 - EPIDERMAL PATTERNING FACTOR-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6604096.1 EPIDERMAL PATTERNING FACTOR-like protein 2, partial [Cucurbita argyrosperma subsp. sororia]3.3e-6799.22Show/hide
Query:  MGCECNNNGVVIGRSRILCATVSFLCLLILASTQMRIKAEGRSISMRTKTVNEDKEILRGQIGSKPPKCERRCSWCGHCEAIQVPANPQKSATKKSSAVK
        MGCECNNNGVVIGRSRILCATVSFLCLLILASTQMRIKAEGRSISMRTKTVNEDKE+LRGQIGSKPPKCERRCSWCGHCEAIQVPANPQKSATKKSSAVK
Subjt:  MGCECNNNGVVIGRSRILCATVSFLCLLILASTQMRIKAEGRSISMRTKTVNEDKEILRGQIGSKPPKCERRCSWCGHCEAIQVPANPQKSATKKSSAVK

Query:  NIVYARDEASNYKPMSWKCKCGSLIFNP
        NIVYARDEASNYKPMSWKCKCGSLIFNP
Subjt:  NIVYARDEASNYKPMSWKCKCGSLIFNP

XP_022949700.1 EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucurbita moschata]2.0e-67100Show/hide
Query:  MGCECNNNGVVIGRSRILCATVSFLCLLILASTQMRIKAEGRSISMRTKTVNEDKEILRGQIGSKPPKCERRCSWCGHCEAIQVPANPQKSATKKSSAVK
        MGCECNNNGVVIGRSRILCATVSFLCLLILASTQMRIKAEGRSISMRTKTVNEDKEILRGQIGSKPPKCERRCSWCGHCEAIQVPANPQKSATKKSSAVK
Subjt:  MGCECNNNGVVIGRSRILCATVSFLCLLILASTQMRIKAEGRSISMRTKTVNEDKEILRGQIGSKPPKCERRCSWCGHCEAIQVPANPQKSATKKSSAVK

Query:  NIVYARDEASNYKPMSWKCKCGSLIFNP
        NIVYARDEASNYKPMSWKCKCGSLIFNP
Subjt:  NIVYARDEASNYKPMSWKCKCGSLIFNP

XP_022963149.1 EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucurbita moschata]8.0e-5384.38Show/hide
Query:  MGCECNNNGVVIGRSRILCATVSFLCLLILASTQMRIKAEGRSISMRTKTVNEDKEILRGQIGSKPPKCERRCSWCGHCEAIQVPANPQKSATKKSSAVK
        MGCECNNNG VIGRSRILCATVSFL  LILASTQMR  AEGRSIS   KTV+EDK +LRGQIGS+PPKCERRCSWC HCEAIQVPANPQ     KSSA+K
Subjt:  MGCECNNNGVVIGRSRILCATVSFLCLLILASTQMRIKAEGRSISMRTKTVNEDKEILRGQIGSKPPKCERRCSWCGHCEAIQVPANPQKSATKKSSAVK

Query:  NIVYARDEASNYKPMSWKCKCGSLIFNP
        NI YARDEASNYKPMSWKCKCGSLIFNP
Subjt:  NIVYARDEASNYKPMSWKCKCGSLIFNP

XP_022979085.1 EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucurbita maxima]1.1e-6598.44Show/hide
Query:  MGCECNNNGVVIGRSRILCATVSFLCLLILASTQMRIKAEGRSISMRTKTVNEDKEILRGQIGSKPPKCERRCSWCGHCEAIQVPANPQKSATKKSSAVK
        MGCE NNNGVVIGRSRILCATVSFLCLLILASTQM+IKAEGRSISMRTKTVNEDKEILRGQIGSKPPKCERRCSWCGHCEAIQVPANPQKSATKKSSAVK
Subjt:  MGCECNNNGVVIGRSRILCATVSFLCLLILASTQMRIKAEGRSISMRTKTVNEDKEILRGQIGSKPPKCERRCSWCGHCEAIQVPANPQKSATKKSSAVK

Query:  NIVYARDEASNYKPMSWKCKCGSLIFNP
        NIVYARDEASNYKPMSWKCKCGSLIFNP
Subjt:  NIVYARDEASNYKPMSWKCKCGSLIFNP

XP_023003267.1 EPIDERMAL PATTERNING FACTOR-like protein 2 isoform X2 [Cucurbita maxima]1.8e-5283.59Show/hide
Query:  MGCECNNNGVVIGRSRILCATVSFLCLLILASTQMRIKAEGRSISMRTKTVNEDKEILRGQIGSKPPKCERRCSWCGHCEAIQVPANPQKSATKKSSAVK
        MGCECNNNG VIGR RILCATVSFL LLILASTQMR  AEGRSIS   KTV+EDK +LRGQIGS+PPKCERRCSWC HCEAIQVPANPQKS+T     +K
Subjt:  MGCECNNNGVVIGRSRILCATVSFLCLLILASTQMRIKAEGRSISMRTKTVNEDKEILRGQIGSKPPKCERRCSWCGHCEAIQVPANPQKSATKKSSAVK

Query:  NIVYARDEASNYKPMSWKCKCGSLIFNP
        NI YARDEASNYKPMSWKCKCGSLIFNP
Subjt:  NIVYARDEASNYKPMSWKCKCGSLIFNP

TrEMBL top hitse value%identityAlignment
A0A6J1GDI3 Epidermal patterning factor-like protein9.5e-68100Show/hide
Query:  MGCECNNNGVVIGRSRILCATVSFLCLLILASTQMRIKAEGRSISMRTKTVNEDKEILRGQIGSKPPKCERRCSWCGHCEAIQVPANPQKSATKKSSAVK
        MGCECNNNGVVIGRSRILCATVSFLCLLILASTQMRIKAEGRSISMRTKTVNEDKEILRGQIGSKPPKCERRCSWCGHCEAIQVPANPQKSATKKSSAVK
Subjt:  MGCECNNNGVVIGRSRILCATVSFLCLLILASTQMRIKAEGRSISMRTKTVNEDKEILRGQIGSKPPKCERRCSWCGHCEAIQVPANPQKSATKKSSAVK

Query:  NIVYARDEASNYKPMSWKCKCGSLIFNP
        NIVYARDEASNYKPMSWKCKCGSLIFNP
Subjt:  NIVYARDEASNYKPMSWKCKCGSLIFNP

A0A6J1HJ94 Epidermal patterning factor-like protein3.9e-5384.38Show/hide
Query:  MGCECNNNGVVIGRSRILCATVSFLCLLILASTQMRIKAEGRSISMRTKTVNEDKEILRGQIGSKPPKCERRCSWCGHCEAIQVPANPQKSATKKSSAVK
        MGCECNNNG VIGRSRILCATVSFL  LILASTQMR  AEGRSIS   KTV+EDK +LRGQIGS+PPKCERRCSWC HCEAIQVPANPQ     KSSA+K
Subjt:  MGCECNNNGVVIGRSRILCATVSFLCLLILASTQMRIKAEGRSISMRTKTVNEDKEILRGQIGSKPPKCERRCSWCGHCEAIQVPANPQKSATKKSSAVK

Query:  NIVYARDEASNYKPMSWKCKCGSLIFNP
        NI YARDEASNYKPMSWKCKCGSLIFNP
Subjt:  NIVYARDEASNYKPMSWKCKCGSLIFNP

A0A6J1IS77 Epidermal patterning factor-like protein5.2e-6698.44Show/hide
Query:  MGCECNNNGVVIGRSRILCATVSFLCLLILASTQMRIKAEGRSISMRTKTVNEDKEILRGQIGSKPPKCERRCSWCGHCEAIQVPANPQKSATKKSSAVK
        MGCE NNNGVVIGRSRILCATVSFLCLLILASTQM+IKAEGRSISMRTKTVNEDKEILRGQIGSKPPKCERRCSWCGHCEAIQVPANPQKSATKKSSAVK
Subjt:  MGCECNNNGVVIGRSRILCATVSFLCLLILASTQMRIKAEGRSISMRTKTVNEDKEILRGQIGSKPPKCERRCSWCGHCEAIQVPANPQKSATKKSSAVK

Query:  NIVYARDEASNYKPMSWKCKCGSLIFNP
        NIVYARDEASNYKPMSWKCKCGSLIFNP
Subjt:  NIVYARDEASNYKPMSWKCKCGSLIFNP

A0A6J1KLZ1 Epidermal patterning factor-like protein8.6e-5383.59Show/hide
Query:  MGCECNNNGVVIGRSRILCATVSFLCLLILASTQMRIKAEGRSISMRTKTVNEDKEILRGQIGSKPPKCERRCSWCGHCEAIQVPANPQKSATKKSSAVK
        MGCECNNNG VIGR RILCATVSFL LLILASTQMR  AEGRSIS   KTV+EDK +LRGQIGS+PPKCERRCSWC HCEAIQVPANPQKS+T     +K
Subjt:  MGCECNNNGVVIGRSRILCATVSFLCLLILASTQMRIKAEGRSISMRTKTVNEDKEILRGQIGSKPPKCERRCSWCGHCEAIQVPANPQKSATKKSSAVK

Query:  NIVYARDEASNYKPMSWKCKCGSLIFNP
        NI YARDEASNYKPMSWKCKCGSLIFNP
Subjt:  NIVYARDEASNYKPMSWKCKCGSLIFNP

A0A6J1KNP8 Epidermal patterning factor-like protein8.6e-5383.59Show/hide
Query:  MGCECNNNGVVIGRSRILCATVSFLCLLILASTQMRIKAEGRSISMRTKTVNEDKEILRGQIGSKPPKCERRCSWCGHCEAIQVPANPQKSATKKSSAVK
        MGCECNNNG VIGR RILCATVSFL LLILASTQMR  AEGRSIS   KTV+EDK +LRGQIGS+PPKCERRCSWC HCEAIQVPANPQKS+T     +K
Subjt:  MGCECNNNGVVIGRSRILCATVSFLCLLILASTQMRIKAEGRSISMRTKTVNEDKEILRGQIGSKPPKCERRCSWCGHCEAIQVPANPQKSATKKSSAVK

Query:  NIVYARDEASNYKPMSWKCKCGSLIFNP
        NI YARDEASNYKPMSWKCKCGSLIFNP
Subjt:  NIVYARDEASNYKPMSWKCKCGSLIFNP

SwissProt top hitse value%identityAlignment
C4B8C4 EPIDERMAL PATTERNING FACTOR-like protein 32.4e-0738.36Show/hide
Query:  NEDKEIL---RGQIGSKPPKCERRCSWCGHCEAIQVPANPQKSATKKSSAVKNIVYARDEASNYKPMSWKCKC
        NE+KE +   R +IGSKPP CE++C  C  CEAIQ P             + +I +     +NY+P  W+C C
Subjt:  NEDKEIL---RGQIGSKPPKCERRCSWCGHCEAIQVPANPQKSATKKSSAVKNIVYARDEASNYKPMSWKCKC

Q2V3I3 EPIDERMAL PATTERNING FACTOR-like protein 45.3e-0730.58Show/hide
Query:  RSRILCATVSFLCLLILASTQMRIKAEGRSISMRTKT------VNEDKEILRGQIGSKPPKCERRCSWCGHCEAIQVPANPQKSATKKSSAVKNIVYARD
        R R L A +    LL L S    + A+GR I  RT +      +  +K    G  GS PP C  +C  C  C+ + VP  P  S   +            
Subjt:  RSRILCATVSFLCLLILASTQMRIKAEGRSISMRTKT------VNEDKEILRGQIGSKPPKCERRCSWCGHCEAIQVPANPQKSATKKSSAVKNIVYARD

Query:  EASNYKPMSWKCKCGSLIFNP
            Y P +W+CKCG+ +F P
Subjt:  EASNYKPMSWKCKCGSLIFNP

Q9LFT5 EPIDERMAL PATTERNING FACTOR-like protein 11.5e-0937.18Show/hide
Query:  RGQIGSKPPKCERRCSWCGHCEAIQVPANPQKSATKKSSAV--------KNIVYARDEASNYKPMSWKCKCGSLIFNP
        + ++GS PP C  RC+ C  C AIQVP  P +S   + +           ++    D+ SNYKPM WKC C    +NP
Subjt:  RGQIGSKPPKCERRCSWCGHCEAIQVPANPQKSATKKSSAV--------KNIVYARDEASNYKPMSWKCKCGSLIFNP

Q9LUH9 EPIDERMAL PATTERNING FACTOR-like protein 53.2e-0431.88Show/hide
Query:  GQIGSKPPKCERRCSWCGHCEAIQVPANPQKSATKKSSAVKNIVYARDEASNYKPMSWKCKCGSLIFNP
        G  GS PP C  +C  C  C+A+ VP  P             ++   +    Y P +W+CKCG+ +F P
Subjt:  GQIGSKPPKCERRCSWCGHCEAIQVPANPQKSATKKSSAVKNIVYARDEASNYKPMSWKCKCGSLIFNP

Q9T068 EPIDERMAL PATTERNING FACTOR-like protein 27.6e-2250.85Show/hide
Query:  LCLLILASTQMRIKAEGR----SISMRTKTVNED-KEILRGQIGSKPPKCER-RCSWCGHCEAIQVPANPQ-------KSATKKSSAVKNIVYAR-DEAS
        L LLIL ST   + A GR    S+   TK+ ++D K ++RG IGS+PP+CER RC  CGHCEAIQVP NPQ        +++  SS   ++ Y R D+++
Subjt:  LCLLILASTQMRIKAEGR----SISMRTKTVNED-KEILRGQIGSKPPKCER-RCSWCGHCEAIQVPANPQ-------KSATKKSSAVKNIVYAR-DEAS

Query:  NYKPMSWKCKCGSLIFNP
        NYKPMSWKCKCG+ I+NP
Subjt:  NYKPMSWKCKCGSLIFNP

Arabidopsis top hitse value%identityAlignment
AT3G13898.1 unknown protein1.7e-0838.36Show/hide
Query:  NEDKEIL---RGQIGSKPPKCERRCSWCGHCEAIQVPANPQKSATKKSSAVKNIVYARDEASNYKPMSWKCKC
        NE+KE +   R +IGSKPP CE++C  C  CEAIQ P             + +I +     +NY+P  W+C C
Subjt:  NEDKEIL---RGQIGSKPPKCERRCSWCGHCEAIQVPANPQKSATKKSSAVKNIVYARDEASNYKPMSWKCKC

AT3G22820.1 allergen-related2.3e-0531.88Show/hide
Query:  GQIGSKPPKCERRCSWCGHCEAIQVPANPQKSATKKSSAVKNIVYARDEASNYKPMSWKCKCGSLIFNP
        G  GS PP C  +C  C  C+A+ VP  P             ++   +    Y P +W+CKCG+ +F P
Subjt:  GQIGSKPPKCERRCSWCGHCEAIQVPANPQKSATKKSSAVKNIVYARDEASNYKPMSWKCKCGSLIFNP

AT4G14723.1 BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:AT3G22820.1)3.8e-0830.58Show/hide
Query:  RSRILCATVSFLCLLILASTQMRIKAEGRSISMRTKT------VNEDKEILRGQIGSKPPKCERRCSWCGHCEAIQVPANPQKSATKKSSAVKNIVYARD
        R R L A +    LL L S    + A+GR I  RT +      +  +K    G  GS PP C  +C  C  C+ + VP  P  S   +            
Subjt:  RSRILCATVSFLCLLILASTQMRIKAEGRSISMRTKT------VNEDKEILRGQIGSKPPKCERRCSWCGHCEAIQVPANPQKSATKKSSAVKNIVYARD

Query:  EASNYKPMSWKCKCGSLIFNP
            Y P +W+CKCG+ +F P
Subjt:  EASNYKPMSWKCKCGSLIFNP

AT4G37810.1 unknown protein5.4e-2350.85Show/hide
Query:  LCLLILASTQMRIKAEGR----SISMRTKTVNED-KEILRGQIGSKPPKCER-RCSWCGHCEAIQVPANPQ-------KSATKKSSAVKNIVYAR-DEAS
        L LLIL ST   + A GR    S+   TK+ ++D K ++RG IGS+PP+CER RC  CGHCEAIQVP NPQ        +++  SS   ++ Y R D+++
Subjt:  LCLLILASTQMRIKAEGR----SISMRTKTVNED-KEILRGQIGSKPPKCER-RCSWCGHCEAIQVPANPQ-------KSATKKSSAVKNIVYAR-DEAS

Query:  NYKPMSWKCKCGSLIFNP
        NYKPMSWKCKCG+ I+NP
Subjt:  NYKPMSWKCKCGSLIFNP

AT5G10310.1 unknown protein1.1e-1037.18Show/hide
Query:  RGQIGSKPPKCERRCSWCGHCEAIQVPANPQKSATKKSSAV--------KNIVYARDEASNYKPMSWKCKCGSLIFNP
        + ++GS PP C  RC+ C  C AIQVP  P +S   + +           ++    D+ SNYKPM WKC C    +NP
Subjt:  RGQIGSKPPKCERRCSWCGHCEAIQVPANPQKSATKKSSAV--------KNIVYARDEASNYKPMSWKCKCGSLIFNP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGTGTGAGTGTAACAACAATGGCGTCGTCATTGGGCGCAGCAGAATCTTGTGTGCGACTGTTTCTTTTCTCTGTCTTCTGATATTGGCATCGACCCAGATGAGAAT
CAAGGCTGAAGGTAGATCGATTTCAATGAGGACCAAGACAGTGAATGAAGATAAGGAGATATTAAGAGGACAAATTGGATCAAAGCCACCAAAATGTGAGAGAAGATGCA
GCTGGTGCGGTCACTGTGAGGCCATTCAAGTTCCTGCAAACCCACAAAAATCAGCAACTAAAAAATCTTCAGCAGTGAAGAACATAGTTTATGCTAGAGATGAAGCCTCC
AATTACAAGCCCATGAGCTGGAAATGCAAATGTGGGAGCTTAATCTTCAACCCTTAA
mRNA sequenceShow/hide mRNA sequence
TCTGTTGCTTGGGAAGAAGAAAGGATATGGATATGGCGTGATTAGGTGGGCGAGTTGAGAACAAAATCACAACAATCCCAAAACTTGAATTTTAAACTAACAACCAAAAA
CAGAAGAGGAGGAAAAGGAAGACCAAATCCCACTCTCACACACCTCCCATTGCGCTGCTCTCACGTCTGGCTATGGAACAACTTGGCAGCATTTAGGAGCATTTGCAAAT
TTTGCTCTCATCTTTCGGCTCCTTGTTATTTTGATTGCCGCCATTACAATTCCTACTTGCAACTCTCATTCTCACGAATTTTTCTTCTCTCTCACTTCTTAGCTCTTATT
TTATTCTATTTTCTGTTGGGTTAAAGTGTTTGGAGGGGGGGCTCTTCTTTCGAGTTCTGAGGGGTTCTGCACTTTTTGGTACTCTCCCTTCTTTCTTGTGTTTCTTTTTC
ATTTCTCTTCCACGTTCAATCATCTCAAATATCTTTCCCACACTAACACACATATTCAGACCAAATTATATTATATACACGTACCACCGCCGTTGAGACCAAAATCAGAA
CCTATTCTCCCACCGATTCTGATTTAAAATTCACTTCTCCACCCACTTTCTTCTTTCCTTTGTTTCTGAATATCTGAGCTCTCCATCTCCAGGGACAATTCCCTGTCTCT
TTCTCTGTGAGAACAATAGGAAAATGGGGTGTGAGTGTAACAACAATGGCGTCGTCATTGGGCGCAGCAGAATCTTGTGTGCGACTGTTTCTTTTCTCTGTCTTCTGATA
TTGGCATCGACCCAGATGAGAATCAAGGCTGAAGGTAGATCGATTTCAATGAGGACCAAGACAGTGAATGAAGATAAGGAGATATTAAGAGGACAAATTGGATCAAAGCC
ACCAAAATGTGAGAGAAGATGCAGCTGGTGCGGTCACTGTGAGGCCATTCAAGTTCCTGCAAACCCACAAAAATCAGCAACTAAAAAATCTTCAGCAGTGAAGAACATAG
TTTATGCTAGAGATGAAGCCTCCAATTACAAGCCCATGAGCTGGAAATGCAAATGTGGGAGCTTAATCTTCAACCCTTAA
Protein sequenceShow/hide protein sequence
MGCECNNNGVVIGRSRILCATVSFLCLLILASTQMRIKAEGRSISMRTKTVNEDKEILRGQIGSKPPKCERRCSWCGHCEAIQVPANPQKSATKKSSAVKNIVYARDEAS
NYKPMSWKCKCGSLIFNP