CuGenDBv2

Gene ID	Carg00771
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Growth-regulating factor
Genome location	Carg_Chr03:6673532..6673897
RNA-Seq Expression	Carg00771
Synteny	Carg00771
Gene Ontology terms	GO:0006355 - regulation of transcription, DNA-templated (biological process) GO:0099402 - plant organ development (biological process) GO:0005634 - nucleus (cellular component) GO:0005524 - ATP binding (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6604107.1 Growth-regulating factor 1, partial [Cucurbita argyrosperma subsp. sororia]

1.3e-55

95.73

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Query:  MDFGVVGLDGFVDSGDAPSPHSKLKSHGSCFSKQDRSGFVDDDWRNSKIPKTEPISGSKTMPLHQGFPLLRSNTFISSSDGRQKEHMLSFSSLKSETSLL
        MDFGVVGLDGFVDSGDAPSPHSKLKSHGSCFSKQDRSGFVDDDWRNSKIPKTEPISGSKTMPLHQGFPLLRSNTFISSSDGRQKEHMLSFSSLKSETSLL
Subjt:  MDFGVVGLDGFVDSGDAPSPHSKLKSHGSCFSKQDRSGFVDDDWRNSKIPKTEPISGSKTMPLHQGFPLLRSNTFISSSDGRQKEHMLSFSSLKSETSLL

Query:  PKHSDLIARNLPKLHFP
        PKHSDLIARN     FP
Subjt:  PKHSDLIARNLPKLHFP

KAG7034271.1 Growth-regulating factor 1, partial [Cucurbita argyrosperma subsp. argyrosperma]

1.4e-62

100

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Query:  MDFGVVGLDGFVDSGDAPSPHSKLKSHGSCFSKQDRSGFVDDDWRNSKIPKTEPISGSKTMPLHQGFPLLRSNTFISSSDGRQKEHMLSFSSLKSETSLL
        MDFGVVGLDGFVDSGDAPSPHSKLKSHGSCFSKQDRSGFVDDDWRNSKIPKTEPISGSKTMPLHQGFPLLRSNTFISSSDGRQKEHMLSFSSLKSETSLL
Subjt:  MDFGVVGLDGFVDSGDAPSPHSKLKSHGSCFSKQDRSGFVDDDWRNSKIPKTEPISGSKTMPLHQGFPLLRSNTFISSSDGRQKEHMLSFSSLKSETSLL

Query:  PKHSDLIARNLPKLHFPSQSTQ
        PKHSDLIARNLPKLHFPSQSTQ
Subjt:  PKHSDLIARNLPKLHFPSQSTQ

XP_022950928.1 growth-regulating factor 1-like [Cucurbita moschata]

1.9e-56

96.58

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Query:  MDFGVVGLDGFVDSGDAPSPHSKLKSHGSCFSKQDRSGFVDDDWRNSKIPKTEPISGSKTMPLHQGFPLLRSNTFISSSDGRQKEHMLSFSSLKSETSLL
        MDFGVVGLDGFVDSGDAPSPHSKLKSHGSCFSKQDRSGFVDDDWRNSKIPKTEPISGSKTMPLHQGFPLLRSNTFISSSDGRQKEHMLSFSSLKSETSLL
Subjt:  MDFGVVGLDGFVDSGDAPSPHSKLKSHGSCFSKQDRSGFVDDDWRNSKIPKTEPISGSKTMPLHQGFPLLRSNTFISSSDGRQKEHMLSFSSLKSETSLL

Query:  PKHSDLIARNLPKLHFP
        PKHSDLIARNL    FP
Subjt:  PKHSDLIARNLPKLHFP

XP_022978926.1 growth-regulating factor 1-like [Cucurbita maxima]

2.4e-54

94.87

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Query:  MDFGVVGLDGFVDSGDAPSPHSKLKSHGSCFSKQDRSGFVDDDWRNSKIPKTEPISGSKTMPLHQGFPLLRSNTFISSSDGRQKEHMLSFSSLKSETSLL
        MDFGVVGLDGFVDSGDAPSPHSKLKS GSCFSKQDRSGFVDDDWRNSKIPKTEPISGSKTMPLHQGFPLLRSNTFISSSDGRQKEHMLSFSSLKSETSLL
Subjt:  MDFGVVGLDGFVDSGDAPSPHSKLKSHGSCFSKQDRSGFVDDDWRNSKIPKTEPISGSKTMPLHQGFPLLRSNTFISSSDGRQKEHMLSFSSLKSETSLL

Query:  PKHSDLIARNLPKLHFP
        PKHSDLIARN     FP
Subjt:  PKHSDLIARNLPKLHFP

XP_023543094.1 growth-regulating factor 1-like [Cucurbita pepo subsp. pepo]

1.3e-55

95.73

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Query:  MDFGVVGLDGFVDSGDAPSPHSKLKSHGSCFSKQDRSGFVDDDWRNSKIPKTEPISGSKTMPLHQGFPLLRSNTFISSSDGRQKEHMLSFSSLKSETSLL
        MDFGVVGLDGFVDSGDAPSPHSKLKSHGSCFSKQDRSGFVDDDWRNSKIPKTEPISGSKTMPLHQGFPLLRSNTFISSSDGRQKEHMLSFSSLKSETSLL
Subjt:  MDFGVVGLDGFVDSGDAPSPHSKLKSHGSCFSKQDRSGFVDDDWRNSKIPKTEPISGSKTMPLHQGFPLLRSNTFISSSDGRQKEHMLSFSSLKSETSLL

Query:  PKHSDLIARNLPKLHFP
        PKHSDLIARN     FP
Subjt:  PKHSDLIARNLPKLHFP

TrEMBL top hits

e value

%identity

Alignment

A0A5A7T2T2 Growth-regulating factor

2.7e-40

76.61

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Query:  MDFGVVGLDGFVDSGDAPSPH------SKLKSHGSCFSKQDRSGFVDDDWRNSKIPKTEPIS-GSKTMPLHQGFPLLRSNTFISSSDGRQKEHMLSFSSL
        MDFGVVGLD FVDS DAPSPH      + LKS GS FSKQDRSGFVDDDWRNSKIPKTE +S  SKTMPLHQGFPLLRSNT + SSDGRQKEHMLSFSS+
Subjt:  MDFGVVGLDGFVDSGDAPSPH------SKLKSHGSCFSKQDRSGFVDDDWRNSKIPKTEPIS-GSKTMPLHQGFPLLRSNTFISSSDGRQKEHMLSFSSL

Query:  KSETSLLPKHSDLIARNLPKLHFP
        KSETSL  K SDLI+RN     FP
Subjt:  KSETSLLPKHSDLIARNLPKLHFP

A0A5D3CN71 Growth-regulating factor

2.7e-40

76.61

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Query:  MDFGVVGLDGFVDSGDAPSPH------SKLKSHGSCFSKQDRSGFVDDDWRNSKIPKTEPIS-GSKTMPLHQGFPLLRSNTFISSSDGRQKEHMLSFSSL
        MDFGVVGLD FVDS DAPSPH      + LKS GS FSKQDRSGFVDDDWRNSKIPKTE +S  SKTMPLHQGFPLLRSNT + SSDGRQKEHMLSFSS+
Subjt:  MDFGVVGLDGFVDSGDAPSPH------SKLKSHGSCFSKQDRSGFVDDDWRNSKIPKTEPIS-GSKTMPLHQGFPLLRSNTFISSSDGRQKEHMLSFSSL

Query:  KSETSLLPKHSDLIARNLPKLHFP
        KSETSL  K SDLI+RN     FP
Subjt:  KSETSLLPKHSDLIARNLPKLHFP

A0A6J1BTS6 Growth-regulating factor

9.4e-41

79.31

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Query:  MDFGVVGLDGFVDSGDAPSPH------SKLKSHGSCFSKQDRSGFVDDDWRNSKIPKTEPISGSKTMPLHQGFPLLRSNTFISSSDGRQKEHMLSFSSLK
        MDFGVVGLD FVDS DAPSPH      +KLK+ GS FSKQDRSGFVDDDWRNSKIPKTE +S SKTMPLHQGFPLLRSNT + SSDGRQKEHMLSFSS+K
Subjt:  MDFGVVGLDGFVDSGDAPSPH------SKLKSHGSCFSKQDRSGFVDDDWRNSKIPKTEPISGSKTMPLHQGFPLLRSNTFISSSDGRQKEHMLSFSSLK

Query:  SETSLLPKHSDLIARN
        SETSL  K SDL+ RN
Subjt:  SETSLLPKHSDLIARN

A0A6J1GG91 Growth-regulating factor

9.4e-57

96.58

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Query:  MDFGVVGLDGFVDSGDAPSPHSKLKSHGSCFSKQDRSGFVDDDWRNSKIPKTEPISGSKTMPLHQGFPLLRSNTFISSSDGRQKEHMLSFSSLKSETSLL
        MDFGVVGLDGFVDSGDAPSPHSKLKSHGSCFSKQDRSGFVDDDWRNSKIPKTEPISGSKTMPLHQGFPLLRSNTFISSSDGRQKEHMLSFSSLKSETSLL
Subjt:  MDFGVVGLDGFVDSGDAPSPHSKLKSHGSCFSKQDRSGFVDDDWRNSKIPKTEPISGSKTMPLHQGFPLLRSNTFISSSDGRQKEHMLSFSSLKSETSLL

Query:  PKHSDLIARNLPKLHFP
        PKHSDLIARNL    FP
Subjt:  PKHSDLIARNLPKLHFP

A0A6J1IPC5 Growth-regulating factor

1.1e-54

94.87

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Query:  MDFGVVGLDGFVDSGDAPSPHSKLKSHGSCFSKQDRSGFVDDDWRNSKIPKTEPISGSKTMPLHQGFPLLRSNTFISSSDGRQKEHMLSFSSLKSETSLL
        MDFGVVGLDGFVDSGDAPSPHSKLKS GSCFSKQDRSGFVDDDWRNSKIPKTEPISGSKTMPLHQGFPLLRSNTFISSSDGRQKEHMLSFSSLKSETSLL
Subjt:  MDFGVVGLDGFVDSGDAPSPHSKLKSHGSCFSKQDRSGFVDDDWRNSKIPKTEPISGSKTMPLHQGFPLLRSNTFISSSDGRQKEHMLSFSSLKSETSLL

Query:  PKHSDLIARNLPKLHFP
        PKHSDLIARN     FP
Subjt:  PKHSDLIARNLPKLHFP

SwissProt top hits

e value

%identity

Alignment

O81001 Growth-regulating factor 1

1.7e-07

40.78

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Query:  VDSGDAPSPHSKLKSH-----GSCFS-KQDRSGFVDDD-WRNSKIPKT------EPISGSKTMPLHQGFPLLRSNTFISSSDGRQKEHMLSFSSLKSETS
        +D G   S H  + S      GS FS KQ+RSGF  +D WR+SK+ +T         + +KT+  HQG PLLRS T      G  +EHMLSFSS   ++ 
Subjt:  VDSGDAPSPHSKLKSH-----GSCFS-KQDRSGFVDDD-WRNSKIPKT------EPISGSKTMPLHQGFPLLRSNTFISSSDGRQKEHMLSFSSLKSETS

Query:  LLP
        + P
Subjt:  LLP

Q8L8A8 Growth-regulating factor 2

4.7e-05

45.33

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Query:  SKQDRSGFVDDD--WRNSKIPKT-------EPISGS------KTMPLHQGFPLLRSNTFISSSDGRQKEHMLSFS
        +KQDRSGF+ +D   R+ K+ +T       E +S S      KTM  HQG PL+RS + + SSD R++E MLSFS
Subjt:  SKQDRSGFVDDD--WRNSKIPKT-------EPISGS------KTMPLHQGFPLLRSNTFISSSDGRQKEHMLSFS

Arabidopsis top hits

e value

%identity

Alignment

AT2G22840.1 growth-regulating factor 1

1.2e-08

40.78

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Query:  VDSGDAPSPHSKLKSH-----GSCFS-KQDRSGFVDDD-WRNSKIPKT------EPISGSKTMPLHQGFPLLRSNTFISSSDGRQKEHMLSFSSLKSETS
        +D G   S H  + S      GS FS KQ+RSGF  +D WR+SK+ +T         + +KT+  HQG PLLRS T      G  +EHMLSFSS   ++ 
Subjt:  VDSGDAPSPHSKLKSH-----GSCFS-KQDRSGFVDDD-WRNSKIPKT------EPISGSKTMPLHQGFPLLRSNTFISSSDGRQKEHMLSFSSLKSETS

Query:  LLP
        + P
Subjt:  LLP

AT4G37740.1 growth-regulating factor 2

3.3e-06

45.33

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Query:  SKQDRSGFVDDD--WRNSKIPKT-------EPISGS------KTMPLHQGFPLLRSNTFISSSDGRQKEHMLSFS
        +KQDRSGF+ +D   R+ K+ +T       E +S S      KTM  HQG PL+RS + + SSD R++E MLSFS
Subjt:  SKQDRSGFVDDD--WRNSKIPKT-------EPISGS------KTMPLHQGFPLLRSNTFISSSDGRQKEHMLSFS

Sequences

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CDS sequence

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ATGGACTTTGGGGTAGTGGGGTTGGATGGTTTTGTGGATTCTGGCGATGCCCCTTCTCCTCACTCTAAGCTAAAATCTCATGGATCTTGTTTCTCTAAGCAGGATAGATC
TGGGTTTGTTGATGATGACTGGAGGAACTCCAAGATTCCCAAAACTGAACCCATCTCTGGTTCTAAGACAATGCCGCTTCATCAGGGGTTCCCTTTGCTGAGATCTAATA
CTTTTATTTCTAGTAGCGATGGGCGTCAAAAGGAGCACATGCTTAGCTTCTCTTCACTCAAATCTGAAACTTCCCTGCTACCTAAACACTCTGACCTGATTGCAAGGAAT
CTCCCAAAACTCCATTTTCCCTCACAATCAACACAA

mRNA sequence

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Protein sequence

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MDFGVVGLDGFVDSGDAPSPHSKLKSHGSCFSKQDRSGFVDDDWRNSKIPKTEPISGSKTMPLHQGFPLLRSNTFISSSDGRQKEHMLSFSSLKSETSLLPKHSDLIARN
LPKLHFPSQSTQ

Carg00771 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome