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Carg00848 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg00848
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionprecursor of CEP5
Genome locationCarg_Chr03:7060437..7062258
RNA-Seq ExpressionCarg00848
SyntenyCarg00848
Gene Ontology termsGO:1901371 - regulation of leaf morphogenesis (biological process)
GO:1902025 - nitrate import (biological process)
GO:2000280 - regulation of root development (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0005179 - hormone activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595043.1 Precursor of CEP3, partial [Cucurbita argyrosperma subsp. sororia]4.2e-2373.17Show/hide
Query:  ESVLSRPLKTDTNHQLFERPAKDGHFQFHGESVEEGNGT----TNPNPPTAAAAASSPGRKMDDFRPTTPGHSPGVGHSIQN
        +S  SRPLKT TNHQL  R AK+ HFQFHG+SV EG GT    + P+PPT  AA SSPGRKMDDFRPTTPGHSPGVGHSIQN
Subjt:  ESVLSRPLKTDTNHQLFERPAKDGHFQFHGESVEEGNGT----TNPNPPTAAAAASSPGRKMDDFRPTTPGHSPGVGHSIQN

KAG6604187.1 hypothetical protein SDJN03_04796, partial [Cucurbita argyrosperma subsp. sororia]5.7e-3698.72Show/hide
Query:  ESVLSRPLKTDTNHQLFERPAKDGHFQFHGESVEEGNGTTNPNPPTAAAAASSPGRKMDDFRPTTPGHSPGVGHSIQN
        ESVLSRPLKTDTNHQLFERPAKDGHFQFHGESVEEGNGTTNPNP TAAAAASSPGRKMDDFRPTTPGHSPGVGHSIQN
Subjt:  ESVLSRPLKTDTNHQLFERPAKDGHFQFHGESVEEGNGTTNPNPPTAAAAASSPGRKMDDFRPTTPGHSPGVGHSIQN

KAG7027066.1 Precursor of CEP3, partial [Cucurbita argyrosperma subsp. argyrosperma]4.2e-2373.17Show/hide
Query:  ESVLSRPLKTDTNHQLFERPAKDGHFQFHGESVEEGNGT----TNPNPPTAAAAASSPGRKMDDFRPTTPGHSPGVGHSIQN
        +S  SRPLKT TNHQL  R AK+ HFQFHG+SV EG GT    + P+PPT  AA SSPGRKMDDFRPTTPGHSPGVGHSIQN
Subjt:  ESVLSRPLKTDTNHQLFERPAKDGHFQFHGESVEEGNGT----TNPNPPTAAAAASSPGRKMDDFRPTTPGHSPGVGHSIQN

KAG7034348.1 hypothetical protein SDJN02_04075, partial [Cucurbita argyrosperma subsp. argyrosperma]1.9e-39100Show/hide
Query:  MVGKESVLSRPLKTDTNHQLFERPAKDGHFQFHGESVEEGNGTTNPNPPTAAAAASSPGRKMDDFRPTTPGHSPGVGHSIQN
        MVGKESVLSRPLKTDTNHQLFERPAKDGHFQFHGESVEEGNGTTNPNPPTAAAAASSPGRKMDDFRPTTPGHSPGVGHSIQN
Subjt:  MVGKESVLSRPLKTDTNHQLFERPAKDGHFQFHGESVEEGNGTTNPNPPTAAAAASSPGRKMDDFRPTTPGHSPGVGHSIQN

TYK12897.1 hypothetical protein E5676_scaffold255G004910 [Cucumis melo var. makuwa]7.7e-1761.63Show/hide
Query:  ESVLSRPLKTDTNH-QLFERPAKDGHFQFHGESVEEGN-------GTTNPNPPTAAAAASSPGRKMDDFRPTTPGHSPGVGHSIQN
        +   SRPL T T+H QL      + HFQFHG +V EG         T NPNPPT AAA S+PGRKMDDFRPTTPGHSPGVGHSI+N
Subjt:  ESVLSRPLKTDTNH-QLFERPAKDGHFQFHGESVEEGN-------GTTNPNPPTAAAAASSPGRKMDDFRPTTPGHSPGVGHSIQN

TrEMBL top hitse value%identityAlignment
A0A0A0KLC0 Uncharacterized protein1.4e-1659.3Show/hide
Query:  ESVLSRPLKTDTNH-QLFERPAKDGHFQFHGESVEEGN-------GTTNPNPPTAAAAASSPGRKMDDFRPTTPGHSPGVGHSIQN
        +   SRPL T T H QL +   K+ HFQ HG+++ EG         T NPNPP +AAA+S+PGRKMDDFRPTTPGHSPGVGHSI+N
Subjt:  ESVLSRPLKTDTNH-QLFERPAKDGHFQFHGESVEEGN-------GTTNPNPPTAAAAASSPGRKMDDFRPTTPGHSPGVGHSIQN

A0A2N9H8T0 Uncharacterized protein1.3e-0642.86Show/hide
Query:  VGKESVLSRPLKTDTNHQLFERPAKDGHFQFHGESV-EEGNGTTNPNPPTAAAAAS--SPGRKMDDFRPTTPGHSPGVGHSIQN
        VGK +  S+ L+T T  +++E        + HGE +  E    + P PP+   + S   P R +D+FRPT+PGHSPGVGHSIQN
Subjt:  VGKESVLSRPLKTDTNHQLFERPAKDGHFQFHGESV-EEGNGTTNPNPPTAAAAAS--SPGRKMDDFRPTTPGHSPGVGHSIQN

A0A2N9HI50 Uncharacterized protein3.5e-0744.05Show/hide
Query:  VGKESVLSRPLKTDTNHQLFERPAKDGHFQFHGESV-EEGNGTTNPNPPTAAAAAS--SPGRKMDDFRPTTPGHSPGVGHSIQN
        VGK +  S+ L+T T  +++E        + HGE +  E    + P PP+   + S   P R +DDFRPT+PGHSPGVGHSIQN
Subjt:  VGKESVLSRPLKTDTNHQLFERPAKDGHFQFHGESV-EEGNGTTNPNPPTAAAAAS--SPGRKMDDFRPTTPGHSPGVGHSIQN

A0A5D3CLS2 Uncharacterized protein3.7e-1761.63Show/hide
Query:  ESVLSRPLKTDTNH-QLFERPAKDGHFQFHGESVEEGN-------GTTNPNPPTAAAAASSPGRKMDDFRPTTPGHSPGVGHSIQN
        +   SRPL T T+H QL      + HFQFHG +V EG         T NPNPPT AAA S+PGRKMDDFRPTTPGHSPGVGHSI+N
Subjt:  ESVLSRPLKTDTNH-QLFERPAKDGHFQFHGESVEEGN-------GTTNPNPPTAAAAASSPGRKMDDFRPTTPGHSPGVGHSIQN

A0A7N2LYJ1 Uncharacterized protein2.3e-0643.9Show/hide
Query:  GKESVLSRPLKTDTNHQLFERPAKDGHFQFHGESVEEGNGTTNPNPPT--AAAAASSPGRKMDDFRPTTPGHSPGVGHSIQN
        GK+S+ S+ ++T T     E    D       +S EE    + P  PT   +     P R +DDFRPTTPGHSPGVGHSIQN
Subjt:  GKESVLSRPLKTDTNHQLFERPAKDGHFQFHGESVEEGNGTTNPNPPT--AAAAASSPGRKMDDFRPTTPGHSPGVGHSIQN

SwissProt top hitse value%identityAlignment
A0A1I9LMX5 Precursor of CEP91.2e-0454.55Show/hide
Query:  GTTNPNPPTAAAAASSPG---RKMDDFRPTTPGHSPGVGHSIQN
        G+T+   PT     +SPG   +K DDF+PTTPGHSPGVGH+++N
Subjt:  GTTNPNPPTAAAAASSPG---RKMDDFRPTTPGHSPGVGHSIQN

O80460 Precursor of CEP31.2e-0445.83Show/hide
Query:  ESVEEGNGTTNPNPPTAAAAASSPGRKMDDFRPTTPGHSPGVGHSIQN
        E +  G    + +PPT     S P   +D FRPT PGHSPG+GHS+ N
Subjt:  ESVEEGNGTTNPNPPTAAAAASSPGRKMDDFRPTTPGHSPGVGHSIQN

Q058G9 Precursor of CEP53.5e-0440Show/hide
Query:  HGESVEEGNGTTNPNPPTAAAAASSPGRKMDDFRPTTPGHSPGVGHSIQN
        H + + +        PP     + S G+  +DFRPTTPGHSPG+GHS+ +
Subjt:  HGESVEEGNGTTNPNPPTAAAAASSPGRKMDDFRPTTPGHSPGVGHSIQN

Arabidopsis top hitse value%identityAlignment
AT2G23440.1 unknown protein8.6e-0645.83Show/hide
Query:  ESVEEGNGTTNPNPPTAAAAASSPGRKMDDFRPTTPGHSPGVGHSIQN
        E +  G    + +PPT     S P   +D FRPT PGHSPG+GHS+ N
Subjt:  ESVEEGNGTTNPNPPTAAAAASSPGRKMDDFRPTTPGHSPGVGHSIQN

AT3G50610.1 unknown protein8.6e-0654.55Show/hide
Query:  GTTNPNPPTAAAAASSPG---RKMDDFRPTTPGHSPGVGHSIQN
        G+T+   PT     +SPG   +K DDF+PTTPGHSPGVGH+++N
Subjt:  GTTNPNPPTAAAAASSPG---RKMDDFRPTTPGHSPGVGHSIQN

AT5G66815.1 unknown protein2.5e-0540Show/hide
Query:  HGESVEEGNGTTNPNPPTAAAAASSPGRKMDDFRPTTPGHSPGVGHSIQN
        H + + +        PP     + S G+  +DFRPTTPGHSPG+GHS+ +
Subjt:  HGESVEEGNGTTNPNPPTAAAAASSPGRKMDDFRPTTPGHSPGVGHSIQN

AT5G66816.1 unknown protein2.1e-0444.23Show/hide
Query:  GTTNPNPPTAAAAASSPGRKM-----------DDFRPTTPGHSPGVGHSIQN
        G T+   PT+   +   G KM           DDF PTTPGHSPGVGH+++N
Subjt:  GTTNPNPPTAAAAASSPGRKM-----------DDFRPTTPGHSPGVGHSIQN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGGAAAGGAATCTGTCCTGAGCAGGCCATTGAAAACCGATACAAATCACCAACTCTTTGAGAGGCCTGCAAAAGACGGTCATTTCCAATTCCATGGTGAAAGTGT
TGAGGAAGGAAATGGAACAACCAACCCGAACCCTCCTACTGCAGCTGCGGCGGCTTCGTCTCCCGGTCGGAAGATGGATGACTTCAGGCCAACCACCCCCGGGCACAGCC
CTGGAGTTGGCCATTCCATTCAGAACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTGGAAAGGAATCTGTCCTGAGCAGGCCATTGAAAACCGATACAAATCACCAACTCTTTGAGAGGCCTGCAAAAGACGGTCATTTCCAATTCCATGGTGAAAGTGT
TGAGGAAGGAAATGGAACAACCAACCCGAACCCTCCTACTGCAGCTGCGGCGGCTTCGTCTCCCGGTCGGAAGATGGATGACTTCAGGCCAACCACCCCCGGGCACAGCC
CTGGAGTTGGCCATTCCATTCAGAACTAA
Protein sequenceShow/hide protein sequence
MVGKESVLSRPLKTDTNHQLFERPAKDGHFQFHGESVEEGNGTTNPNPPTAAAAASSPGRKMDDFRPTTPGHSPGVGHSIQN